Brassica oleracea (wild cabbage): 106296540
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Entry
106296540 CDS
T04124
Name
(RefSeq) E3 ubiquitin-protein ligase SINAT2
KO
K04506
E3 ubiquitin-protein ligase SIAH1 [EC:
2.3.2.27
]
Organism
boe
Brassica oleracea (wild cabbage)
Pathway
boe04120
Ubiquitin mediated proteolysis
Brite
KEGG Orthology (KO) [BR:
boe00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04120 Ubiquitin mediated proteolysis
106296540
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
boe04121
]
106296540
Enzymes [BR:
boe01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
106296540
Ubiquitin system [BR:
boe04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
SINA (Seven in absentia) proteins
106296540
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sina_TRAF
Sina_ZnF
Sina_RING
zf-C3HC4_2
zf-RING_6
zf-RING_UBOX
zf-Di19
zf-C3HC4
Motif
Other DBs
NCBI-GeneID:
106296540
NCBI-ProteinID:
XP_013588142
UniProt:
A0A0D3CUH4
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All DBs
Position
C6:21570185..21573056
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AA seq
308 aa
AA seq
DB search
MAPGGSALKEVLESTSTGMDYEVKMAKAEVNNNKPTKSGSAGVGKYGMHSNNGVYELLEC
PVCTNLMYPPIHQCPNGHTLCSNCKARVQNTCPTCRYELGNIRCLALEKVAESLEVPCRY
QSLGCHDIFPYYSKLKHEQHCRFRPYACPYAGSECSVTGDIHTLVVHLKDDHKVDMHDGC
TFNHRYVKSNPHEVENATWMLTVFNCFGRQFCLHFEAFQLGMAPVYMAFLRFMGDENEAK
KFSYSLEVGAHGRKLTWQGIPRSIRDSHRKVRDSQDGLIIPRNLALYFSGGDRQELKLRV
TGRIWKEE
NT seq
927 nt
NT seq
+upstream
nt +downstream
nt
atggctcctggaggcagtgctttgaaagaagtccttgaatctacttccacaggaatggac
tacgaagttaaaatggcgaaagccgaagttaataataacaaacctacaaagtcagggagc
gcaggagttggaaagtatgggatgcattcaaacaatggtgtctacgagcttctcgaatgt
ccagtgtgtacaaacctaatgtaccctccaattcatcagtgtccaaatggccacacctta
tgttcaaactgcaaagcgagagtgcagaacacttgccctacatgtcgctacgagcttggt
aacataagatgcttagctctcgagaaagttgcagagtccttggaagttccatgccggtac
caaagtttggggtgtcatgacattttcccttactacagcaagctcaagcacgagcagcac
tgcaggtttaggccttacgcttgcccttatgctggctctgagtgttctgttactggtgac
atccacacgcttgttgttcatctgaaagatgatcataaagtcgatatgcatgacggatgc
actttcaaccaccgttatgttaaatcaaatccacatgaagttgagaacgctacatggatg
cttacggtgttcaactgttttgggagacagttctgtttacactttgaggcgttccagcta
gggatggctccagtttacatggcgtttcttcgtttcatgggagatgaaaacgaggcaaag
aagttcagttacagcttggaagtgggagctcatggacgtaaactaacatggcaagggatc
cctagaagcatccgtgacagtcacaggaaagtcagggacagtcaagacggtctcatcatc
cctagaaacctcgcactctacttctctggaggtgacaggcaagaactcaagttgagggtg
accggtagaatctggaaagaagagtaa
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