Brassica oleracea (wild cabbage): 106299952
Help
Entry
106299952 CDS
T04124
Name
(RefSeq) LOW QUALITY PROTEIN: histone-lysine N-methyltransferase ASHH2
Organism
boe
Brassica oleracea (wild cabbage)
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SET
AWS
zf-CW
Motif
Other DBs
NCBI-GeneID:
106299952
NCBI-ProteinID:
XP_013591432
LinkDB
All DBs
Position
C6:complement(38423153..38431238)
Genome browser
AA seq
1706 aa
AA seq
DB search
MDCKENGVSDPSGDENLTSAAMDIGGSFSEKSMDLVTSLETAQAASVINPAMEEDQRECF
VEAEQMGEGNSVGKELEENSDAVCCVDAEQAQGSVSDAIVLGGGGTVLPKGGRETDAESG
FLNDAPEKVESSETAKDIENDKAGSDGFDGGNNEPSSDDVSLIRSCPFPDTVLDSGGLGC
SETENRVKSSSDGDGNIPLVVSSSSAVPEMLSNSDGGLRSCDLDDIVDKETIDPDSRLVH
EDELHTDLSDKNETLLKNHVGNTSSESDVAGMNDDVAVVHEDELHTDLSDKNETLLKNHV
GSSSSESDVAGMNDDVAADPRGQSFSRTSPIEENTSGVEANAPITDPSLVRSFPLKFGNG
VIGARNPENAVESIRIVDGNGRIGGEVASASGTSESSPRRRSRVGKQGNLSQTNLSAPLP
RKSSRKKQSERNLESIFNCSKQKRSSVSKPDRSSQWGLPCRTAEIFLQSNNIPYGRPPHH
ETKQPQNSPKNGEHNTQASSGSCLRLKVKFGKSGGQNPLNITVSKVSGNSLPAGGIVKAG
KGLEFPGPADIVEDKLQIVETREQLKEKNNPLEKLSCRLLSVSITDEKKNQDAGGLCRKL
GGDVLDEGTHLSSSIVVEEGERANGTRPLDSETSPDSEVINSVQKDLPHGFSSTAEDLVN
TNRGLEKQDELLASVSPLENGSHLIPNAKKGKHPNKSKGNGTRKGNSKSKSAKGGRKNES
HEGLEKHSFINRSAGSDDSKDHEVGRAESNETTGALLDANMGKAFAINGAISQDVIHGEA
VMDLTIEDSSPTESAWVRCDDCFKWRRIPASVVGSIDESSRWICMNNSEKEFAHCSISQE
MSNEEINEQLGIGQDEADAYDYEAAKRGKDKEQKSKRLPVNKKACFRAIKTNQFLHRNRK
NQTIDEIMVCHCKPPPDGRLGCGEECLNRMLNIECLHGTCPAGDLCSNQQFQKRKYVKFE
RFQSGKKGYGLRLLEDVREGQFLIEYVGEVLDMQSYESRQKDYASMGQKHFYFMTLNGNE
VIDAGAKGNLGRFINHSCEPNCRTEKWMVNGEICVGIFSMKDLKKGQELTFDYNYVRVFG
AAAKKCYCGSSHCRGYIGGDPLNGDVVVQSDSDEEYPELVILDDDESGEGILDATSKIFM
DGADMQMPQNSTKVDDSKDLASQSPSSVSVKLPESEVLPSFQPTEASKELSTDMPVIDVQ
QEVLEKKTKGASPASKSISRLSSDGANSDKTVKHGSGEDIKILSRPRPRTKTSRSSGSSK
QALPGVNKAQTTPVKKLQQQPIKSKGSEEVSPSGRIETFEGKLNELLDAGGGISKRRDSA
KGYLKLLLLTAASRGNANEGIQSNRDLSMILDALLKTKSRTVLVDVINKNGLQMLHNIMK
QYRRDFKKTPILRKLLKVLEYLATRDILALEHIVRPPPYAGMESFKQSILTLTEHDDKQV
HQIARNFRDRFIPKHLRKPWRIDREERSESRRSPINSRFRSSQEPRYDHHSPRRAEPFAS
RAATPETPSVSDGCIQPTSSSLPETNGRKRKSRWDQPSTSKEQRTMTDVQDDLPPGFSSP
CTDAPNAVTAQPQAKFLSRLTVSYGIPLSIVHQCGLPCKDDPSSWSVAPGVPFSPFPPLP
PVTHGEFFANKRNGTVSDSPKRKREFSSDIGTSYFRQQKQKVPPWIRYNGWEKTANSSIP
RHLTLEKKINNQENLEFRERSTFHES
NT seq
5121 nt
NT seq
+upstream
nt +downstream
nt
atggattgcaaggagaacggtgttagtgacccttccggggatgagaatcttacctccgct
gcgatggacatcggtggaagcttctctgagaagtctatggatttagtcactagtttggag
actgcacaggctgcatcagttataaaccctgcgatggaggaggaccagagggagtgcttt
gtagaggctgagcaaatgggagagggaaacagtgttggtaaagaacttgaggaaaactct
gatgctgtttgttgcgttgatgctgagcaagctcaaggatcggtttctgatgccattgtg
cttggtggtggcggcacagtattgcccaaagggggcagggaaacagatgctgaatcgggt
tttctaaatgatgcacctgaaaaggttgagtcttcggaaactgctaaagatatagagaat
gataaagctggaagtgatggttttgatggaggaaataacgaaccatcgagtgatgatgtt
tctctcattcggagttgtccctttccagatacagtattggattctgggggtttgggttgc
agtgagacagagaatcgtgtgaagtcttctagtgatggtgatggcaatatccctctcgtg
gtgtcctcttcatcagctgttccagaaatgttaagtaatagtgatggtggtctgcgctca
tgtgatcttgatgacatcgtagacaaagagacgatcgatccagattcgaggttggtacat
gaggatgagctgcatactgatctttctgacaagaatgaaacactgctaaagaaccacgtg
gggaatacatcaagtgaaagtgatgtggctggtatgaatgatgatgtggctgtggtacat
gaggatgagctgcatactgatctttctgacaagaatgaaacactgctaaagaaccatgtg
gggagttcatcaagtgaaagtgatgtggctggtatgaatgatgatgtggctgctgatccg
agaggtcaaagtttcagtcggacatcacctatagaggaaaatacctctggtgtagaagcc
aacgcccctattaccgacccttctttggtgaggagttttccgttgaagtttggtaatgga
gtcattggagctcgtaatcctgaaaacgcagtggagtcgatcaggatagtagatggcaat
ggcagaataggtggtgaagttgcttctgcatctgggactagcgagtcttcacctcgaagg
aggtcccgagtcggtaaacagggtaatctttcgcagaccaatctgagtgctcctcttccg
agaaaatcctctagaaagaaacaatcagaaagaaatttggaatcaatttttaactgttcg
aagcagaagaggagctctgtttcaaaaccagaccgttcatctcagtggggattgccatgt
aggaccgctgaaatcttcttacagagcaataatattccttatggtagacctccgcatcac
gaaacaaagcaacctcagaacagtcctaaaaatggagagcataatacccaagcatcaagt
ggctcttgccttcgtttgaaagttaaatttggtaagtcaggtggccaaaatcctttgaac
attacagtctctaaggtcagtggcaactctttgcctgctggtggtattgttaaggccgga
aaaggtttagagtttccagggcctgcagatattgtcgaggataaactccagattgtggaa
actagagagcagttaaaagagaaaaacaatcccttggagaaactttcatgtcggctgtta
tctgtttctattacggatgagaaaaagaaccaagacgctggggggttatgtaggaagcta
ggtggtgatgttttagatgagggtacacacctttcctctagtattgtggttgaagagggc
gagagggctaatggaacccggcccctagactctgaaacttcaccagattcagaagttatc
aactctgtgcaaaaggatttgcctcatggtttttccagcactgcagaagacctggtcaac
acgaacagaggattagaaaaacaagatgaattgcttgcttcagtatctcctttggaaaat
ggttcacatctaattcccaacgccaaaaaaggtaaacatcctaataagtcaaaaggtaat
ggaacaagaaaagggaactccaagtccaagtctgccaaaggcgggagaaaaaatgaatct
cacgaggggttagagaaacacagctttataaataggagtgctggaagtgatgatagtaaa
gatcatgaagtaggaagagcggagtctaacgaaacaacaggtgctcttttggacgctaat
atgggaaaagcctttgccattaatggcgccatatcgcaagatgttattcatggggaagcg
gtcatggaccttactattgaggatagctctcccacagagagtgcttgggttcgatgcgat
gattgttttaaatggagacgaatacctgcttctgtggtagggtcaattgacgagagctcg
agatggatctgtatgaacaactcagagaaagaatttgctcattgctcaatctctcaagag
atgtcaaatgaagaaattaatgaacagttgggcataggacaggatgaagcagatgcatac
gactatgaggcggctaaaagggggaaagacaaggaacagaagagcaaacgtttgccagtt
aacaaaaaggcgtgcttcagggccataaaaacaaaccagtttcttcatcgtaaccgtaaa
aatcaaacaattgacgagataatggtttgtcactgcaaaccaccacctgatggtagactg
ggttgtggagaagaatgtctcaatagaatgcttaacattgaatgtctccatggtacatgc
cctgctggcgatctatgctcaaatcagcagtttcaaaaacggaagtatgttaagtttgag
agattccaatcgggtaagaagggttatggcctgagattgcttgaggatgtacgtgaggga
cagttccttattgaatacgttggagaggtgcttgatatgcaatcttatgagtctcgtcag
aaggattatgcttccatgggtcagaaacatttctatttcatgacactgaatgggaatgag
gtaattgatgctggtgcaaagggaaatttagggcgtttcattaaccatagttgtgaacca
aactgccgtacggaaaagtggatggtgaatggtgaaatttgcgttggaatattctccatg
aaagaccttaagaagggtcaggagttgacatttgactacaactatgtgagggtttttggt
gccgctgccaaaaagtgttactgtggatcatcacattgccgaggttacattgggggagat
cctttgaacggtgatgtagttgttcaaagtgattcagatgaagagtatcccgaacttgtg
atccttgatgatgacgaaagtggggaaggaatcttagatgcaacgtctaagatcttcatg
gatggtgctgacatgcaaatgccgcagaactctacaaaggttgatgattccaaggacctt
gcttctcaatcgcctagctcagtatctgtaaaacttccagagagcgaggttcttccatct
tttcaaccgaccgaagcatccaaggaactttcgacagacatgcctgtcattgatgtccag
caggaggttcttgaaaagaagactaaaggcgcatctcccgcctccaagtctatcagcaga
ctgtcctcggatggtgcaaattctgataagacagtaaagcatggatctggtgaagatata
aagatactttcacgaccccgccctcgtacaaaaacttcgcgttcatcggggtccagcaag
caagctcttcctggtgttaacaaagcacagactacaccagtcaaaaagttgcaacagcag
cccatcaaatctaaaggatcagaggaagtttctcccagcgggcgtattgaaacatttgaa
gggaaactgaacgagttactagatgctgggggagggataagcaagcggagggattcagca
aagggctacttgaaactgctgcttctcactgctgcttcccggggcaatgccaatgaagga
attcaaagcaatcgagatctttcaatgattcttgatgcccttttgaagacaaagtcacga
actgttttggtggacgtaatcaacaagaatggtctgcaaatgttacacaatatcatgaaa
caataccggagggattttaaaaagaccccaatactccgaaaacttttgaaggtattagag
tatcttgccacgagggatattcttgcactggagcatatagtcagaccacctccttacgca
gggatggaaagcttcaagcagtctattctaacactcaccgagcatgatgacaaacaggtg
catcaaattgcgaggaacttccgagacagatttatccctaagcatttaagaaaaccttgg
cgcatcgacagagaagagagatcggagtctagaagatcacctataaacagcagattcaga
tcatcacaagaacctagatatgatcatcattcgccaagacgtgcagaaccatttgcctca
agggctgcaactcccgaaacaccttctgtatccgacgggtgcatacaaccaacctcctcc
agccttcccgagacaaatggacgcaagcgtaaaagcagatgggaccagccgtctacttcc
aaagagcaacgaaccatgacagatgtccaagacgaccttccacccgggttctcatcgcct
tgcactgatgcgcctaatgcagtcactgcacagccacaagcaaagttcctctctcggtta
acagtctcctatgggatcccgcttagcatcgttcatcagtgtggtttaccctgcaaagac
gaccccagtagctggtccgttgctcctggggtgccgttctctccgtttccacctttacca
cctgttactcacggcgagtttttcgctaataagagaaacggaacagtctcggactctcca
aagcggaagagagagttttcatctgatataggaacaagttactttcggcaacagaaacag
aaagttcctccatggatacgatacaacgggtgggagaaaacagcaaacagctccatacct
aggcatctaactttagagaagaagatcaacaatcaagaaaatcttgaatttagagagaga
agtacattccatgaaagttaa
DBGET
integrated database retrieval system
