Brassica oleracea (wild cabbage): 106300696
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Entry
106300696 CDS
T04124
Name
(RefSeq) receptor homology region, transmembrane domain- and RING domain-containing protein 2
KO
K15692
E3 ubiquitin-protein ligase RNF13 [EC:
2.3.2.27
]
Organism
boe
Brassica oleracea (wild cabbage)
Brite
KEGG Orthology (KO) [BR:
boe00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
boe04121
]
106300696
Enzymes [BR:
boe01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
106300696
Ubiquitin system [BR:
boe04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
106300696
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PA
zf-RING_2
zf-RING_11
zf-C3HC4
zf-C3HC4_2
zf-RING_UBOX
zf-rbx1
zf-RING_5
zf-C3HC4_3
zf-ANAPC11
Prok-RING_4
YitT_membrane
zf-RING_4
DUF1180
Motif
Other DBs
NCBI-GeneID:
106300696
NCBI-ProteinID:
XP_013592354
UniProt:
A0A0D3D003
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All DBs
Position
C6:35898029..35900180
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AA seq
452 aa
AA seq
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MMVMTNRALVFLLLILFHLLTLSSFTSAKVILIRNNITRSFDDIEANFAPSVKAAGEIGL
LYVAEPLDACSDLTNKPEQSSNGTSPFVLIVRGGCSFEDKVRKAQRAGFKAAIIHDNEDR
GILVAMAGNSGGIKIHAVFVTKETGDALKEFAGLSDAKVWLLPSFENSAWSIMAVSFISL
LAMSAVLATCFFVRRHRIRRRTSRSSRVREFHGMSRRLVKAMPSLIFSSVHEDNTTAFTC
AICLEDYNVGDKLRVLPCRHKFHAVCVDSWLTSWRTFCPVCKRDARTANGEPPASESTPL
LSSAASSFHSSSALSSFRSSAMLIGPSMGSLPTSISFSPAHASSSYIRQSFRSSSLRRSP
PITVSRSSMDLRHQGGSPSPSQRSYMASPQSFNYPAMSPLNARYMSPYRPSPSNASPGLI
GSSSNHPLNPLRYSESAGTFSPYASANSLPDC
NT seq
1359 nt
NT seq
+upstream
nt +downstream
nt
atgatggtgatgacgaatcgtgctcttgtcttcctcctcctcatactcttccacctcctc
accctctcttcgttcacctcagccaaagtgattctcatcaggaacaacatcactcgctct
ttcgacgacatcgaagccaacttcgctccctctgttaaagctgctggtgaaattggattg
ctttacgtggctgagcctcttgacgcttgctctgacttgacgaataagcctgaacagagc
tcgaatggtacttccccttttgtgttgatcgttagaggaggttgtagtttcgaagataaa
gtcagaaaagcccagagagctggtttcaaagctgctattatacatgacaatgaagaccgt
ggaatcttggtagcaatggcaggtaactcgggaggtataaagattcatgcggttttcgtt
actaaggagactggagatgcgttaaaggagttcgccggtttgtctgatgccaaagtgtgg
ctgcttcctagcttcgagaactctgcttggtccatcatggcggtctcgttcatctctttg
ctcgcaatgtcagctgttctcgccacttgtttcttcgtccgcaggcatcggataagaaga
cgaacgtcacggtcctctagagtcagagagtttcacggaatgagtcgccgtttggtgaag
gcaatgccgagtctaatctttagttcggtgcacgaagacaatactactgcgttcacttgc
gctatctgtctcgaagactataacgtcggagacaagctcagggtcttgccttgccgtcac
aagtttcacgcggtttgtgttgactcgtggctaacctcatggagaacgttctgccccgtg
tgcaaacgcgacgcgagaacggccaacggcgagccgccagcttcggagagcactccgttg
ctctcgtccgccgcttcgtcttttcactcttcctctgcgctctcttcgttcagatcatca
gcaatgctgatcggtccttccatgggatctttaccgacttcgatctcgttctctccggcg
cacgcgagctcttcctacatcagacagtccttcaggtcctcctctctccggagatctcct
cctataaccgtgagtcgaagctcaatggatctcagacaccaaggaggttctccgtcgccg
tcgcagagatcgtatatggcttctccacagtcgtttaattacccggctatgtcgcctctc
aacgctaggtacatgtcgccgtataggcctagcccgagcaatgcgtcacctggattgatc
gggtcgtcatcgaatcatccgttaaatcctctgcgttacagtgaatcagcaggaactttc
tctccatacgcttctgcaaactcgctgccagactgttga
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