Brassica oleracea (wild cabbage): 106312981
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Entry
106312981 CDS
T04124
Name
(RefSeq) LOW QUALITY PROTEIN: ABC transporter B family member 7-like
KO
K05658
ATP-binding cassette, subfamily B (MDR/TAP), member 1 [EC:
7.6.2.2
]
Organism
boe
Brassica oleracea (wild cabbage)
Pathway
boe02010
ABC transporters
Brite
KEGG Orthology (KO) [BR:
boe00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
106312981
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
boe02000
]
106312981
04147 Exosome [BR:
boe04147
]
106312981
04090 CD molecules [BR:
boe04090
]
106312981
Enzymes [BR:
boe01000
]
7. Translocases
7.6 Catalysing the translocation of other compounds
7.6.2 Linked to the hydrolysis of a nucleoside triphosphate
7.6.2.2 ABC-type xenobiotic transporter
106312981
Transporters [BR:
boe02000
]
ABC transporters, eukaryotic type
ABCB (MDR/TAP) subfamily
ABCB1, 4, 5 subgroups
106312981
Exosome [BR:
boe04147
]
Exosomal proteins
Exosomal proteins of other body fluids (saliva and urine)
106312981
CD molecules [BR:
boe04090
]
Proteins
106312981
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ABC_membrane
ABC_tran
ABC_ATPase
SMC_N
AAA_29
AAA_16
AAA_22
AAA_21
Zeta_toxin
RsgA_GTPase
AAA_30
AAA_15
DEAD
ATP-synt_ab
AAA
nSTAND1
SbcC_Walker_B
Motif
Other DBs
NCBI-GeneID:
106312981
NCBI-ProteinID:
XP_013606149
LinkDB
All DBs
Position
C9:complement(19497269..19505145)
Genome browser
AA seq
1266 aa
AA seq
DB search
MNRVYKVQRVTSDSYNSNSFSFGLNSLFFTPRKKPMEEKAKRITNGDGGNQKVAFYKLFR
FADRYDIILMAVGTISAMANGLAQPITSVLIGKIINVFGFSDHDHMVKEVSKVALKFLYL
AVYACVVSFLQVSCWMVTGERQSARIRVLYLKTILRQDIGFFDTETSTGEVIGRMSGDTI
LIQDSMGEKVGKFVQLISTFXGGFTVACIIGRRLTVAPIPCIPLIVATGGAMALIMSKMA
GRGLHAYAEAGNVIEQAVGSIRTVVAFTREKQATQKYEKKLEIAYKSMVQQGLFSGLGLG
IMMVVSYCTYGIAIWYGAWLIMEKGYTGGQVMNVIFASLGGGMSLGQTLPSLNAFAAGQA
AAYKMFETIKXKPKIDAYSMTGKVLDEIKGDIKLKDVYFRYPARPDVQIFAGFSLVVPNG
TTVALVGQSGSGKSTVISLIERFYDPESGEVLIDGIALKKLQLRWIRSKIGLVSQEPILF
ATTIRENIVYGKEDEEIRTAVKLANATRFVDKLPQGLDTMVGDHGTQLSGGQKQRLAIAR
AILKNPKILLLDEATSALDAESERTVQDALVKLMSTRTTIAVAHRLTTIKTASMIAVVQQ
GKIIEKGTHEEMIPDPEGAYSQLVSLQEVSKKGGVEELELRENISVSHNQTDFGLPRPIN
LNQTKETHENKSSTENKASKKREKVSLRRLAHLNKPEIPVLLAGSLAAAVHGIVYPVQGL
LMSSTIKIFFEPSDQLRKDSHFWAIIFVLLGLTDLIVVPFQNYLFAIAGGRLIKRIRSLS
FDKVIHQEISWFDNTESSSGVIGARLSTDASAVKSIVGDALALIMQNIATVIAALVIAFT
ANWILAIIILLMTPIIVLQGYFQTKCIAGFSANAKEKYQEASQVASDAVSSIRTVASFCA
EDKVMDLYQQKCEAPKKQGVRLGLVSGSGYGISFLPLYCINSLCFYVGFWLIQKRIATFG
EFFQVFFALTMTALAVSQTSAMAPDRNKAKDSAASIFEILDSKPKIDSSSNEGTVLPIVH
GHVEFQHVSFRYPTRPDIQIFSDLCLTISSGQTVALVGESGSGKSTVISLIERFYDPDSG
KVLLDQVDVRILKLSWLRQQMGLVSQEPVXFNETIRSNIAYGKTGEAREEEIITAAKAAN
AHNFISTLPQGYETSVGERGVQLSGGQKQRIAIARTILKDPKVLLLDEATSALDAESERV
VQDALDRVMVNRTTVVVAHPLTTIKNADVIAVVNDGVIAERGRHETLMEISGGAYASLVA
FHMSAN
NT seq
3801 nt
NT seq
+upstream
nt +downstream
nt
atgaaccgagtttataaagtccaaagagtgacatctgactcgtataattccaatagtttt
tcttttgggttaaattctcttttttttaccccccgcaagaaaccaatggaggagaaagcg
aagaggatcacgaatggagacggaggcaatcagaaagtagcgttttacaagcttttcagg
tttgcagatcgatacgacatcattttaatggcggttgggactatctccgccatggccaac
ggcctagctcagccgataacgtcagtactcataggcaaaatcattaacgtctttggcttc
tctgatcatgatcacatggttaaagaagtctccaaggttgctttgaagtttctttacctt
gcagtctacgcgtgcgttgtgtctttcctgcaggtctcatgttggatggtaactggggag
cgtcagtccgccagaattcgagtgctatacctcaaaacaatattaagacaagatattggc
ttttttgacaccgagacaagcaccggtgaagtcatcggcagaatgtccggggacaccatt
cttattcaagactccatgggagaaaaggttgggaaatttgtacagttaatatcaacattc
nttggtggattcacagtcgcttgtataattggcagacgcctcacagtagctcctattcca
tgcattccattgatcgtggccactggtggtgcaatggccttgatcatgtccaaaatggct
ggtcgtggcctacacgcttatgcggaagctggaaatgtaatagaacaagctgttgggtcg
attagaacagtcgtggcattcaccagagagaaacaagcaacccaaaaatatgagaagaag
ctcgagattgcctataaatctatggttcaacaagggctcttctcgggtctaggccttgga
ataatgatggttgtaagttattgtacatatggtattgccatttggtacggtgcttggctg
ataatggagaaaggatatactggaggtcaagtcatgaacgtgattttcgcaagtttgggt
ggaggaatgtcgttggggcagacattaccttctcttaacgctttcgcggctggacaagcc
gcagcctacaaaatgtttgagactataaaancaaaaccaaagatagatgcttatagcatg
actggtaaggttttggacgagattaaaggagacattaagctaaaagacgtgtattttcga
tatccagcaagacctgacgtgcagatctttgctggattttcgttggttgtaccaaatggc
accaccgtggctttggtggggcagagtggaagcggaaaatcaacagtgatcagtctgatt
gagaggttctatgatccggaatcaggagaagttttaattgatggaattgctttaaagaag
cttcagttaagatggatcagaagcaagattggtttagtaagccaagagcctatacttttc
gcaaccacaatcagggagaacattgtttatgggaaagaagatgaagaaattagaaccgcg
gttaagctggctaatgctactaggtttgtcgacaaactgccgcagggtttggacacaatg
gtaggagatcacgggacacaattatctggtggacagaagcagaggctcgcgattgctagg
gccatattgaaaaaccctaaaatcttgcttcttgatgaagcaacaagtgctttagatgcg
gaatcagaacgaacagttcaggacgctcttgttaagctaatgtcaacccggacaaccatc
gcggtggctcatcgacttaccactattaaaaccgccagcatgatcgccgttgtgcagcag
ggcaaaatcattgagaaaggaactcacgaggagatgattccagatcccgagggagcgtat
tcacagcttgttagtctacaagaagtatcaaagaaaggaggagtggaggaactggagctg
cgtgagaatatatccgttagccacaaccaaaccgattttggtttaccgagaccgattaat
ttgaaccaaaccaaagaaacccacgagaataagtcttccacggagaacaaagcgtccaag
aaacgcgagaaagtatcgttgcgacggcttgctcacctcaacaaaccagagattccagtt
ttgttggccggttcattggctgcagcggttcacggtattgtgtacccggtccaagggctg
cttatgtctagcaccatcaagatattcttcgagccttcagatcaactacgtaaagattca
catttctgggctatcatcttcgtcttgctcggtttaacggatctgatcgtggttccgttt
caaaactatctgttcgctatagctggaggaagacttatcaaacgcattagatcattatct
tttgataaagttattcaccaggagataagttggttcgataatacagaaagttctagtggc
gtgattggagcaaggttgtctaccgatgcttcagcagtgaagagtatagtgggtgacgct
ttggcgttgatcatgcaaaatatagcgactgtaatcgctgcattggttatagcgtttacg
gctaattggatattagctataataatccttcttatgacaccaattatagtccttcagggt
tactttcagaccaagtgtatagccggttttagcgcaaacgccaaagaaaaataccaagaa
gcgagtcaggttgccagtgatgcggtgagcagcataagaacagttgcatcattctgtgca
gaggataaagtgatggatctataccaacagaaatgcgaggcaccaaagaaacaaggtgtc
cggttaggactagtgagcggttcgggctacggtatctcattcttgcctctctactgcatc
aattccttatgtttttacgtaggtttctggttaatccagaagaggattgccacgtttgga
gaattctttcaggttttctttgcgttaactatgaccgcattagcagtgtctcaaacgagt
gctatggcacctgatagaaacaaagccaaagactctgctgcttctattttcgagatactt
gatagtaaaccgaaaatcgattcgagttccaacgaggggacagtgttaccaattgtgcac
ggtcatgtcgagtttcaacacgtcagtttccggtatccgacacgaccagatattcagatt
tttagtgacttatgcttaactatctcctctggacagaccgtggcattggttggagagagc
gggagtgggaaatctacggtgataagcttaatcgagagattctacgatccagattcaggc
aaagttctcttggatcaagttgatgttcgaatattgaaactgagttggttgaggcaacag
atgggtttggttagtcaagaaccggtttaattcaacgagacaatcagatcaaacatagct
tatggcaaaaccggtgaagccagggaggaagagatcataaccgcggccaaagcagctaat
gcgcataacttcataagcacgttaccgcaaggctacgaaacttcggtaggtgaacgcggt
gtacagttatccggtggtcagaaacagaggatcgccatagctaggactattctcaaggat
cctaaggttttgttgcttgacgaagcaacaagcgcgttagacgcggagtctgagcgggtg
gtgcaggatgcgcttgaccgcgtgatggtgaaccggaccacggttgtggtggctcacccg
ctcactacgattaagaacgcggatgttattgcggttgtgaacgacggtgtgatcgccgag
agagggagacatgaaacgttaatggagatatcaggtggtgcttatgcttcgcttgtagct
tttcacatgagtgcgaattga
DBGET
integrated database retrieval system
