Brassica oleracea (wild cabbage): 106331731
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Entry
106331731 CDS
T04124
Name
(RefSeq) replication protein A 70 kDa DNA-binding subunit B
KO
K07466
replication factor A1
Organism
boe
Brassica oleracea (wild cabbage)
Pathway
boe03030
DNA replication
boe03420
Nucleotide excision repair
boe03430
Mismatch repair
boe03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
boe00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
106331731
03420 Nucleotide excision repair
106331731
03430 Mismatch repair
106331731
03440 Homologous recombination
106331731
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
boe03000
]
106331731
03032 DNA replication proteins [BR:
boe03032
]
106331731
03400 DNA repair and recombination proteins [BR:
boe03400
]
106331731
Transcription factors [BR:
boe03000
]
Eukaryotic type
Zinc finger
Cys2His2 others
106331731
DNA replication proteins [BR:
boe03032
]
Eukaryotic type
DNA Replication Elongation Factors
RPA (replication protein A)
106331731
DNA repair and recombination proteins [BR:
boe03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
RPA (replication factor A)
106331731
MMR (mismatch excision repair)
106331731
DSBR (double strand breaks repair)
HR (homologous recombination)
106331731
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Rep_fac-A_C
REPA_OB_2
Rep-A_N
tRNA_anti-codon
DUF223
Motif
Other DBs
NCBI-GeneID:
106331731
NCBI-ProteinID:
XP_013625590
UniProt:
A0A0D3B078
LinkDB
All DBs
Position
C3:1731606..1734584
Genome browser
AA seq
602 aa
AA seq
DB search
MENSVTQDGIASLLSLDSSSVQPQIVVQVVDLKPVGNRYTFNANDGKMKIKAMLPATLTS
EIVSGKIQNLGLIRLLHYTANDIPGKSGEKYLLVTKCEAVASALDSEIKSELKASTGIVL
KPKQEFVAKSASQIINEQRGNAAPAARMAMTRRVHPLVSLNPYQGSWTIKVRVTNKGVLR
TYKNARGEGCVFNVELTDEEGTQIQATMFNAPAKKFYDTFQKGKVYYISRGTLKLANKQF
KTVQNDYEMTLNEYSEVEEAGSEEMFIPETKFNFVPIDELGPYVNQKELVDVIGVVQSVS
PTMSIRRKSDNEMIPKRDIILADETKKTVVVSLWNDLATDLGQELLDMADKYPVIAIKSL
KVGDFQGVSLSTISKSDVVVNPDIPEAAKLKSWYDSEGKETSMSAIGSGMSPSANSGSRS
MYSDRACLSHFTTNPSLGEDKPVFFSTRAYISFIKPDQAMWYRACKTCNKKVTEAMDSGY
WCEGCQKKDEECSLRYIMAVKVSDSTGEAWFSAFNDEAEKMIGCTADELNVLKSEEGEGN
EFQTKLKEATWSSHLFRVSVSQQEYNSEKRQRITVRGVAPVDFAAETRLLLQDISKNKMT
SQ
NT seq
1809 nt
NT seq
+upstream
nt +downstream
nt
atggagaactcagtgacccaagatggcatcgcgtcattattatccctcgattcctcctct
gttcaacctcagatcgtcgttcaagtcgtggatcttaaacccgttggaaatcgatacacg
tttaatgctaatgatggaaagatgaagatcaaagcaatgttgcctgcgactttaacgtct
gagatcgtctctggaaaaatccagaatcttggtctgattcgtctccttcattatactgcc
aacgatattccaggcaaatctggagaaaaatatttgcttgtaaccaaatgcgaggctgtt
gcttctgcacttgactcagagattaagtcggagctcaaagcttctacaggcatagtgttg
aaaccgaagcaggagtttgtcgccaaatcagcttcacagataatcaatgagcagagagga
aacgctgcaccagctgcaagaatggctatgaccaggagggtccatccccttgtgtccttg
aacccttaccaaggaagctggaccattaaagtccgtgtcacaaacaaaggagtcttgaga
acttacaaaaacgctagaggagaaggatgtgtcttcaatgtggaactaactgatgaggaa
ggaacgcagattcaggcgacgatgtttaacgcacctgcaaagaagttttatgacacgttc
cagaagggaaaagtctattacatatcgaggggaacacttaagcttgctaacaagcagttc
aagacggttcagaacgattacgagatgactctgaacgagtattcagaggttgaagaagct
gggagcgaagaaatgtttatccctgagacaaaattcaactttgtacccattgatgagctg
ggtccatacgtgaatcagaaggagcttgttgatgttatcggtgttgtccaaagtgtttct
cccaccatgagcattagaagaaagagtgacaatgagatgatcccaaagagggatataatt
ttagctgatgagacgaagaaaaccgtcgtggtgtccctttggaacgatctagctactgac
ttaggacaagagcttctagacatggctgataagtaccctgtcattgcgattaagtctctc
aaagttggagattttcaaggtgtttcactctccactatcagcaaaagcgacgtggtggta
aatcctgatataccagaagctgcaaagttaaaatcttggtatgattccgaaggtaaagag
acgtctatgtctgctattggctctgggatgagcccttctgccaatagtggatcaagatcc
atgtattctgacagagcctgtctctctcacttcacaaccaatccctctttaggcgaggac
aagcctgtgtttttcagtactagagcttacataagcttcatcaagccagaccaggcaatg
tggtaccgtgcttgcaagacttgtaacaagaaagtgactgaagcaatggactctggttac
tggtgtgaaggttgtcagaaaaaggatgaagagtgcagtttaaggtatataatggcggtg
aaagtctctgattcaaccggtgaagcctggttctctgcattcaatgatgaagcagagaag
atgattggatgcacagctgatgaactcaacgtactaaaatcggaggaaggggaagggaat
gagtttcagacaaaactgaaggaagctacttggtcatctcatctcttccgtgttagtgtt
tctcaacaagagtataacagtgagaagagacagaggataactgtaagaggtgttgctccg
gttgattttgctgctgagacaagattgttgcttcaagacatttccaagaacaagatgaca
tctcagtag
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integrated database retrieval system
