KEGG   Bosea sp. Tri-49: BLM15_30030Help
Entry
BLM15_30030       CDS       T05753                                 

Definition
(GenBank) ATP-dependent DNA ligase
  KO
K01971  bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
Organism
boi  Bosea sp. Tri-49
Pathway
boi03450  Non-homologous end-joining
Brite
KEGG Orthology (KO) [BR:boi00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03450 Non-homologous end-joining
    BLM15_30030
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:boi03400]
    BLM15_30030
Enzymes [BR:boi01000]
 6. Ligases
  6.5  Forming phosphoric-ester bonds
   6.5.1  Ligases that form phosphoric-ester bonds (only sub-subclass identified to date)
    6.5.1.1  DNA ligase (ATP)
     BLM15_30030
DNA repair and recombination proteins [BR:boi03400]
 Prokaryotic Type
  DSBR (double strand breaks repair)
   NHEJ (non-homologous end-joining)
    Two-component NHEJ DNA repair complex
     BLM15_30030
BRITE hierarchy
SSDB OrthologParalogGene clusterGFIT
Motif
Pfam: LigD_N DNA_ligase_A_C DNA_ligase_A_M
Motif
Other DBs
NCBI-ProteinID: AZO82033
LinkDB All DBs
Position
unnamed1:complement(275021..277645)
Genome map
AA seq 874 aa AA seqDB search
MAGKLQAYRAKRDFQKTKEPSDNAPVASSDRLRFVIQKHDATRLHYDLRLELDGVFKSWA
VTKGPSLDPHDKRLAVEVEDHPLAYGDFEGTIPKGEYGGGTVQLWDRGFWEPEGKLSAER
QLQKGDLKFTLKGKRLHGSFVLVRMRSDRDGGKRTNWLLIKHRDEHAVDGDGEAVLKAET
SVASGRKMPAIAAGKGRSPEPFLLAENVLAPDAEWDSRRGLAAKQRTSAKRPASKDQART
ANMPPFIAPQLCRSVERPSNGNGWVHEIKFDGYRVQMRIEGSKVTLKTRKGLDWTSKFRG
IAKAAAGLPDAIIDGEIVALDGHGSPDFAALQAAISEGKTQHLVYFAFDMLFDRNKDMRA
EPLLERKEQLKTYLDEHADGVVVRYVEHFETGGDAVLKSACKLSLEGIVSKAVKAPYVSG
RSDTWTKAKCRAGHEVVIGGWSTTAGKFRSLLVGVNRGSHFVYIGRVGTGYSAAKVNALL
PRLKAVAANTSPFTGAGAPKREPGVTWLKPELVAEIEFAGWTGDGMVRQAAFKGLREDKP
ADEVETELPADPEEIETPEPRPARTRGRGGRVDVIGVSISHPDKPLWPHAEDGRPVTKQD
LAEYFAAVGDWMLPHIKGRPCSLVRAPDGIDGEMFFQRHAGMGTSNLFELVRVFGDKKPY
LQIDRIEALAAAAQIGGIELHPWNCVPGDPEVPGRLVFDLDPGPGVSFGDVIDAAKQMRE
RLAALGLESFCKTTGGKGLHVVAPLAPAKRSKVGWPAAKDFARGVCAVLASEEPSRYVVN
MAKRLRNGRIFLDYLRNDRMATAVAPLSPRARPGAHASMPLTWSQVKSGLDPSRYTVRTL
PGLLKKTKAWDGYDDAAGSIADAIKKLGKRAEAA
NT seq 2625 nt NT seq  +upstreamnt  +downstreamnt
gtggccggaaaactccaagcatatcgcgccaaacgcgattttcagaaaaccaaggaaccg
agtgacaacgcgcccgtggcgtcctcggatcgtttgcggttcgtcattcaaaagcacgac
gccacgaggctccactacgacctgcgtctcgaactcgatggggtcttcaaatcttgggcg
gtgacgaaggggccatcgcttgatccccatgacaagcggctggccgtcgaggtggaagat
catccgctggcttacggcgacttcgaagggacgatccctaagggggaatatggaggcggc
acggtccagctctgggatcgcgggttttgggagccagaaggcaagctcagcgccgagcgc
caactgcaaaaaggcgatctgaagtttaccctgaagggcaaacggcttcacggcagcttc
gtcctcgtccgcatgcgcagcgatagggacggtggcaagcggaccaactggctgctcatc
aagcatcgcgatgagcatgcggtcgatggtgacggcgaagcggttttgaaagctgagacc
tcggtggcatcgggccggaagatgcctgcgatagcggcgggcaaagggcgctctccggaa
ccattcctgcttgccgaaaacgtcctggctccggatgcggagtgggacagccgaaggggt
cttgcggcgaagcagagaactagtgcgaagagacccgcgtcaaaagaccaagcgcggacc
gccaatatgccgcccttcatcgcaccccagctatgccgcagcgtcgagcggccgtccaat
ggcaatgggtgggttcacgaaatcaagtttgacggatatcgcgttcagatgcggatagaa
ggcagcaaagtcaccctgaagacgcgcaaggggctcgactggacctcgaaatttcgcggg
attgcgaaggccgcagctggcttgcccgatgccatcatcgacggcgagatcgtcgcactc
gacggccacggctcgcctgattttgcggcactccaggccgccatctccgaaggtaagacg
cagcatctcgtctattttgcattcgacatgctcttcgacaggaacaaggatatgcgcgca
gagccgcttctcgagcggaaggagcagctaaagacttatctcgatgagcatgccgacggt
gttgttgttcgctatgtcgagcattttgaaaccggcggcgacgccgtgctgaagtcggcc
tgcaaattgtccttagagggcatcgtctcgaaggccgtcaaagcgccttatgtttccgga
cgcagtgacacatggacgaaggctaaatgtcgtgccgggcatgaggtcgtcatcggcggc
tggtccacgacggcaggcaagttcagatcgctcctggtcggcgtcaatcgaggctcgcac
ttcgtctacatcggccgggtcggcacaggctacagcgccgccaaggtcaatgcgttattg
ccgcggctgaaggcagtggccgcgaacacatcgcctttcaccggagctggcgctcccaag
cgcgagcctggtgtcacttggctaaagcccgagctcgtcgctgagatcgagttcgccggc
tggaccggcgatggcatggttcggcaggcggccttcaagggcctgcgtgaagacaagccc
gccgacgaggtcgagactgaactacccgccgatcccgaagagatcgaaactccagaaccg
cgcccagctcgcactcgcggacgcggaggtagggtcgatgtaatcggcgtcagcatcagc
catccggacaagccgttgtggccacatgccgaggatggtcgtcccgtcactaaacaggat
ctggccgagtattttgcagctgtaggcgactggatgctgccgcatatcaaggggcgcccc
tgctcgctggtgcgtgcaccggatggcatcgacggagagatgttcttccagcgccatgcc
ggcatgggcacgtcgaacctgttcgagctcgtccgcgttttcggcgacaagaagccctat
cttcaaatcgatcgaattgaagcattggccgcggcagctcagatcggaggcatcgagctg
cacccctggaactgcgtgcccggcgatcctgaggttccagggcgcctcgtattcgatcta
gatccgggaccaggggtcagcttcggcgacgtcatcgatgccgcgaagcagatgcgcgag
aggctcgctgcgctcggtctcgaaagcttctgcaagaccactggcggaaagggcctgcac
gtggttgcgccgctcgcgcccgcaaaacgcagcaaggtcggctggccggccgcaaaggat
ttcgcccgaggggtctgtgccgtactggcgagcgaggagccgtcgcgctacgtcgtcaac
atggccaagcgcctgcgaaacggccggattttcctcgactatcttcgcaatgatcgcatg
gcgacggcggtcgccccgctctcgcctcgggccaggcccggcgcccacgcctcgatgccg
ctgacatggtcgcaagttaaatccggtctcgacccaagccgttacacggtgcggaccctg
cctggcctgctcaagaaaaccaaggcttgggacggttatgacgacgcagcgggatcgatc
gcggacgctatcaagaaactcgggaaacgtgccgaggcggcctga

DBGET integrated database retrieval system