Burkholderia oklahomensis E0147: DM82_936
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Entry
DM82_936 CDS
T03284
Name
(GenBank) PDZ domain protein
KO
K04771
serine protease Do [EC:
3.4.21.107
]
Organism
bok
Burkholderia oklahomensis E0147
Pathway
bok01503
Cationic antimicrobial peptide (CAMP) resistance
bok02020
Two-component system
Brite
KEGG Orthology (KO) [BR:
bok00001
]
09130 Environmental Information Processing
09132 Signal transduction
02020 Two-component system
DM82_936
09160 Human Diseases
09175 Drug resistance: antimicrobial
01503 Cationic antimicrobial peptide (CAMP) resistance
DM82_936
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
bok01002
]
DM82_936
09182 Protein families: genetic information processing
03110 Chaperones and folding catalysts [BR:
bok03110
]
DM82_936
Enzymes [BR:
bok01000
]
3. Hydrolases
3.4 Acting on peptide bonds (peptidases)
3.4.21 Serine endopeptidases
3.4.21.107 peptidase Do
DM82_936
Peptidases and inhibitors [BR:
bok01002
]
Serine peptidases
Family S1: chymotrypsin family
DM82_936
Chaperones and folding catalysts [BR:
bok03110
]
Other chaperones and cochaperones
DegP / HtrA
DM82_936
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Trypsin_2
PDZ_2
PDZ_6
PDZ
Trypsin
Tricorn_PDZ
Peptidase_S46
DUF150_C
Motif
Other DBs
NCBI-ProteinID:
AIO67732
LinkDB
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Position
1:1081559..1083100
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AA seq
513 aa
AA seq
DB search
MSRQTLGRTLVHAAAIGVVLAGYACLQPTSTAAGTLPQPVKTKRIAQIGPAGPIDFPTLV
ERYGPAVVSVSVAAPEPQMSASGLEALDPDDPFSAYFKLGVPQPPTSQDSAPRAMAGAGS
GFIVSADGLILTTAYVVGQASEVTVRLIDRREFNARVLAVDDQSDVAVLQVDATKLPTVR
LGDSSRVRVGEPVLTIGTPDGSANTVTTGIVSATSRTLPDGGSFPFFQTDVTGNLDNSGG
PVFNRAGEVIGIDVQIYAGGDRYPGVTFAIPINLAAKVRTQVLQAQQQARQQARQQAQQT
QQAQRAAAPGGLGVDVQDVGPGLAAAFGLPRSAGALVNAVEPGSPAAAIGLQPGDVIVRI
GDKPIGRSAELAGDVAALPPGTNTTLTLLRNRAPMTLMLGPGAAAGTVAGTSSGSASVGR
SEVGGADRLGLTMHPLTDDERRSTGLPVGMVVDAVRGPAAGAGIQPGDVVLEFNDTLIET
PDMVPTLEAKAGKVVAVLIQRGGERKFVSVRLR
NT seq
1542 nt
NT seq
+upstream
nt +downstream
nt
gtgtctcgtcaaacgcttggccgcaccttggttcacgctgcagcgatcggggtggtgctt
gccggctatgcctgcctgcagccgacgtcgaccgcagcaggcaccctgccgcagcctgtg
aagacgaagcgcatcgcgcaaatcggtccggcggggccgatcgatttccccacgctcgtc
gagcgatacgggcccgccgtcgtgagcgtcagcgtggccgcgccggagccgcaaatgtcg
gcatccggcctcgaggccctcgatcccgacgatccgttctccgcgtacttcaagctgggc
gtgccgcagccgccgacgtcgcaggacagcgcgccgcgcgcgatggcgggcgccgggtcc
ggtttcatcgtcagcgccgacggtctcatcctgacgaccgcctacgtggtcggccaggcc
tccgaggtgacggtccggctgatcgatcgacgcgagttcaacgcgcgggtgttggcggtc
gacgatcagagcgacgtcgccgtccttcaggtcgatgcgacgaagctgccgacggtgagg
ctcggcgactcgtcgcgggtgcgcgtcggcgagccggtgctgacgatcggcacgcccgac
ggctcggcgaacacggtgacgacgggcatcgtcagcgcgacgtcacgcacgctgcccgac
ggcggcagcttcccgttcttccagaccgacgtgaccggcaatctcgacaactcgggcggc
ccggtgttcaaccgcgcgggcgaggtgatcggcatcgacgtgcagatctatgcgggcggc
gaccgctatccgggcgtgacttttgcgatcccgatcaatctggcggcgaaggtgcgcacg
caggtgctgcaggcgcaacaacaagcgcggcagcaagcgcggcaacaggcacagcagact
cagcaggcgcagcgcgcggcggctccgggcgggctgggcgtcgacgtgcaggacgtcggg
ccggggctcgcggccgcgttcggcttgccgcgttcggcgggcgcgctcgtcaacgcggtc
gagccgggatcgcccgccgccgcgatcggcctgcagccgggcgacgtgatcgtgcggatc
ggcgacaagccgatcggccgctcggccgagctcgccggcgatgtggccgcgctgccgccc
gggacgaacacgacgctcacgctgctgcgcaaccgggcgccgatgacgttgatgctcggg
ccgggcgcggccgcgggaacggtggccgggacgtcgtcggggagtgcgagcgtcggtcgg
agcgaagtcggcggcgcggaccgcctgggtctgacgatgcatccgctgacggacgacgag
cgccgttcgaccgggctgccggtcggcatggtggtcgacgcggtgcgcgggccggcggcg
ggcgcgggcatccagccgggcgacgtcgtgctggagttcaacgacacgctgatcgagacg
ccggacatggtgccgacgttggaggcgaaggcggggaaggtggtggcggtgctgatccag
cggggcggggagcgcaagttcgtgtcggtcaggctgagatga
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