Bos mutus (wild yak): 102276187
Help
Entry
102276187 CDS
T02919
Symbol
COL11A1
Name
(RefSeq) collagen type XI alpha 1 chain
KO
K19721
collagen type V/XI/XXIV/XXVII, alpha
Organism
bom
Bos mutus (wild yak)
Pathway
bom04820
Cytoskeleton in muscle cells
bom04974
Protein digestion and absorption
Brite
KEGG Orthology (KO) [BR:
bom00001
]
09140 Cellular Processes
09142 Cell motility
04820 Cytoskeleton in muscle cells
102276187 (COL11A1)
09150 Organismal Systems
09154 Digestive system
04974 Protein digestion and absorption
102276187 (COL11A1)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
00536 Glycosaminoglycan binding proteins [BR:
bom00536
]
102276187 (COL11A1)
Glycosaminoglycan binding proteins [BR:
bom00536
]
Heparan sulfate / Heparin
Extracellular matrix molecules
102276187 (COL11A1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Collagen
COLFI
Laminin_G_2
Laminin_G_1
Laminin_G_3
Motif
Other DBs
NCBI-GeneID:
102276187
NCBI-ProteinID:
XP_014334351
LinkDB
All DBs
Position
Un
AA seq
1822 aa
AA seq
DB search
MERWSSRWKTKRWLWDFTITTLALTFLFQAREVRGADPVDVLKALDFHNSPEGISKTTGF
CTNRKNSKGSDTAYRVSKQAQLSAPTKQLFSGGTFPEDFSILFTIKPQKGIQSFLLSIYN
EHGIQQIGVEVGRSPVFLYEDHTGKPAPEDYPLFRTVNIADGKWHRVAISVEKKTVTMIV
DCKKKTTKPLDRSEKAIVDTNGIMVFGTRILDEEVFEGDIQQLLIIGDPKAAYDYCEHYS
PDCDSSAPEAAQAQEPQVDEKKKFSFKMKMKTVATNSKKKSKKFTPPKSEKFASKKKKTY
QAAAMAKLGVKANIVDDFQEYNYGTESYQTEAPRSVSGSNEPNPVEEVFTEEYLTGEDYD
SQRKNSEDMLYENKQIDGRDSDLLVDGDLGEYDFYEYKEYEDKPTSPTNEEFGPGVPAET
DITETSINGHGAYGEKGQKGEPAVVEPGMLIEGPPGPAGPAGLMGPPGLQGPTGPPGDPG
ERGPPGRPGLPGADGLPGPPGTMLVLPFRYGGDSSKGPTVSAQEAQAQAILQQARIALRG
PPGPMGLTGRPGPVGGPGSSGAKGEMGDPGPQGPRGVQGPPGPTGKPGKRGRPGADGGRG
MPGEPGAKGDRGFDGLPGLPGDKGHRGERGPQGPPGPPGEDGIRGEDGEIGPRGLPGEAG
PRGLLGPRGTPGPIGQPGIAGVDGPPGPKGNMGPQGEPGPPGQQGNPGPQGLPGPQGPIG
PPGEKGPQGKPGLAGLPGADGPPGHPGKEGQSGEKGSLGPPGPQGPIGYPGPRGVKGADG
VRGLKGSKGEKGEDGFPGFKGDMGLKGDRGEVGQVGPRGEDGPEGPKGRAGPTGDPGPPG
QAGEKGKLGVPGLPGYPGRQGPKGSTGFPGFPGANGEKGARGVAGKPGPRGQRGPTGPRG
SRGARGPTGKPGPKGTSGGDGPPGPPGERGPQGPQGPVGFPGPKGPPGPPGKDGLPGHPG
QRGETGFQGKTGPPGPGGVVGPQGPTGETGPIGERGHPGPPGPPGEQGLPGAAGKEGAKG
DPGPQGVSGKDGPAGLRGFPGERGLPGAQGAPGLKGGEGPQGPPGPVGSPGERGSQEKKT
AGTAGPIGLPGRPGPQGPPGPAGEKGAPGEKGPQGPAGRDGVQGPVGLPGPAGPAGSPGE
DGDKGEIGEPGQKGSKGDKGENGPPGPPGLQGPVGAPGIAGGDGEPGPRGQQGMFGQKGD
EGARGFPGPPGPIGLQGLPGPPGEKGENGDVGPMGPPGPPGPRGPQGPNGADGPQGPPGS
IGSVGGVGEKGEPGEAGNPGPPGEAGTGGPKGERGEKGEAGPPGAAGPPGAKGPPGDDGP
KGNPGPVGFPGDPGPPGEPGPAGQDGVGGDKGEDGDPGQPGPPGPSGEAGPPGPPGKRGP
PGAAGAEGRQGEKGAKGEAGAEGPPGKTGPVGPQGPAGKPGPEGLRGIPGPVGEQGLPGA
AGQDGPPGPLGPPGLPGLKGDPGSKGEKGHPGLIGLIGPPGEQGEKGDRGLPGTQGSPGA
KGDGGIPGPAGPIGPPGPPGLPGPQGPKGTKGSTGPAGQKGDSGLPGPPGPPGPPGEVIQ
PLPILSPKKTRRHAESTQADAGDNILDYNDGMEEIFGSLNSLKQDIEHMKFPMGTQTNPA
RTCKDLQLSHPDFPDGEYWIDPNQGCSGDSFKVYCNFTSGGETCIYPDKKSEGVRISSWP
KEKPGSWFSEFKRGKLLSYLDIEGNSINMVQMTFLKLLTASARQNFTYYCHQSVAWYDVS
SGSYDKALRFLGSNDEEMSYDNNPYIKALFDGCASRKGYEKTVIEINTPKIDQVPIVDVM
INDFGDQNQKFGFEVGPVCFLG
NT seq
5469 nt
NT seq
+upstream
nt +downstream
nt
atggagcggtggtcctctaggtggaaaacgaaacggtggctctgggatttcaccataaca
actctcgcactgactttcctcttccaggctagagaggtcagaggagctgatccagttgat
gtactaaaagctctagattttcacaattctccagagggaatatcaaaaacaacgggcttt
tgcacaaacagaaagaattcaaaaggttcagatactgcttacagagtttcaaagcaagca
caacttagcgccccaacgaaacaattattttcagggggaacttttccagaagatttttca
atattatttacaataaaaccccaaaaaggaattcagtctttccttttatctatatataat
gagcacggtattcagcaaattggtgttgaggttgggagatcacctgttttcctgtatgaa
gaccacactggaaaacctgccccagaagactatcccctttttagaaccgttaacattgca
gatggaaagtggcaccgggtagcaatcagcgtggagaagaaaactgtgacaatgattgtt
gattgtaagaagaaaactacaaaaccgcttgacagaagtgagaaagcaatcgttgacacc
aatggaattatggtttttgggacaaggattttggatgaagaagtttttgagggggacatc
cagcaattgttgatcataggtgaccccaaagcagcatatgactactgtgagcattacagt
ccagactgtgattcctcagctcccgaggctgctcaggctcaggaaccccaggtcgacgag
aaaaagaaattcagtttcaaaatgaagatgaagacagtggccactaattcaaagaaaaag
tccaaaaagtttacaccccctaaatctgaaaaatttgcatccaagaagaagaaaacttat
caagcagcagcaatggccaagctaggggtaaaggcaaatattgttgatgattttcaagaa
tacaactatgggacagaaagttaccagacggaagctcctaggagtgtatctggatcaaat
gagccaaatccagttgaagaagtatttactgaagaatatctaactggagaggattatgat
tcccagaggaaaaattctgaggatatgctatatgaaaacaaacaaatagacggcagggac
tctgatcttctggtagatggagatttaggcgaatatgatttttatgaatataaggaatat
gaagataaaccaacaagtcccactaatgaagaatttggtccaggtgttccagcagaaaca
gatatcacagaaacaagtataaatggccatggtgcatatggagaaaaaggacagaaagga
gaaccagcagtagttgaacctggcatgcttattgaaggaccaccagggcctgcaggacct
gcgggtcttatgggtcctccaggtctacaaggccccactggaccccctggtgaccctggc
gagaggggtcctccaggacgtcctggtttaccaggggctgatggtctacctggtcctcct
ggtaccatgttagtgttaccgtttcgttatggcggtgatagttccaaaggaccaaccgtc
tctgctcaggaagctcaggcccaggccattcttcagcaggctcggattgctctgagaggt
ccacctggcccaatgggtctgactggaagaccgggtcctgtgggtgggcctggttcttct
ggggccaaaggtgagatgggtgatccaggtcctcagggcccacgtggtgtccaaggtcct
cctggtccaacaggaaaacctggaaaaaggggtcgtccgggtgctgatggaggaagagga
atgccaggagaacccggggccaagggggatcgaggatttgatggacttccaggtctacca
ggtgacaagggtcacaggggtgaacgaggtcctcaaggtcctcctggtcctcctggtgaa
gatggaataaggggagaagatggagaaataggaccaaggggtcttccaggtgaagctggt
ccacgaggtttgctaggaccaagaggaactccaggacctattggacagcctggtatagcc
ggtgtggatggccccccaggaccaaaagggaacatgggtcctcaaggggagccgggacct
cctggtcagcagggaaacccaggacctcagggtcttcctggtccacaaggtccaattggt
cctccgggtgaaaaaggtccacaaggaaaaccagggcttgcaggacttcctggtgctgat
gggcctcctggtcatcctggaaaagaaggccagtctggagaaaaaggttctctgggccct
cctggtccacagggtcccattggctaccctggtccccgaggagtaaagggagcagatggt
gtcagaggtctcaaaggctctaaaggtgaaaagggtgaagatggttttccaggattcaaa
ggtgacatgggtctcaaaggtgatagaggagaagttggtcaagtaggtccaagaggagag
gatggccctgaaggccccaaaggtcgagctggtccaaccggagaccccggtcctcctggt
caggcaggagagaaggggaaacttggcgttccaggattaccaggatatccaggaagacaa
ggtccaaagggttccactggatttcctgggtttccaggtgccaatggagagaaaggtgcc
cggggcgtagctggcaaaccaggtcctcggggtcagcgtggtccaacgggacctcgaggt
tcaagaggagcaagaggtcccactgggaaaccaggtccaaagggcacttcaggtggtgat
ggccctcctggccctcctggtgaaagaggtcctcaaggacctcaaggtccagttggattc
cctggaccaaaaggccctcctggaccacctggaaaagatggcctgccaggacatcctggg
caacgtggagagactggatttcaaggcaagaccggccctcctgggccagggggtgttgtt
ggaccacagggaccaactggtgagactggtccaataggtgaacgtggacatcctggccct
cctggccctcctggggagcaaggtcttcctggtgctgcaggaaaagaaggtgcaaagggt
gacccaggtcctcaaggtgtctcagggaaagatggaccagcaggactacgtggtttccca
ggtgaaagagggcttcctggagctcagggtgcccctggattgaaaggaggagaaggtccc
cagggcccaccaggtccagttggctcaccaggagaacgtggatcacaggaaaaaaaaaca
gcaggaacagctggcccaattggtttgccagggcggccaggaccccagggtccccctggt
ccagctggagagaaaggtgctccaggagaaaaaggtccccaaggtcctgcagggagagat
ggagtacaaggccctgtgggtctccccgggcctgcggggcctgctggctcccctggagaa
gatggagacaagggtgaaattggtgaaccaggacaaaaaggcagcaagggtgacaaagga
gaaaacggtcctcctggtcccccaggtcttcaaggtccagttggtgcccctggaattgct
ggaggtgatggtgaaccaggtcccagaggtcagcaggggatgtttggacaaaaaggtgat
gagggtgccagaggtttcccaggacctcctggtcccataggtcttcagggtcttccaggc
ccacctggtgaaaaaggagaaaatggggatgttggtcccatgggtccacctggtcctcca
ggcccaagaggtcctcaaggtcccaatggagctgatggaccacaaggacctccaggatcc
attggctcagttggtggtgttggagaaaagggtgaacctggagaagcagggaacccaggg
cctcctggggaagcaggcacaggtggtcccaaaggagaaagaggagagaaaggagaagct
ggtcccccaggtgctgctggacctcctggtgctaagggaccgccaggtgatgatggccct
aagggtaatccgggtcctgttggttttcctggagatcctggtcctcctggtgagcctggc
cctgcaggtcaggatggtgttggtggtgacaagggtgaagatggagatcctggacaaccg
ggtcctcctggcccatctggtgaggctggcccaccaggtcctcctggtaaaagaggtcct
cctggagctgcaggggcagagggaagacaaggtgaaaaaggcgctaagggagaagcagga
gctgagggtcctccaggaaaaactggcccggttggtcctcagggaccggccggaaagcct
ggtccagagggtcttcggggcatccctggccctgtgggagaacaaggtctccctggagct
gcaggccaagatgggccacctggtcctttgggacctcctggcttacccggtctcaaaggt
gaccctggctccaagggtgaaaagggacatcctggtttaattggcctaattggtcctcca
ggagaacaaggtgaaaagggtgacagaggactccctggaactcaaggatctccaggagca
aagggagatggaggaattccaggtcctgccggtcccattggtccacctggtcctccgggc
ttaccaggtcctcaaggtccaaagggcactaaaggctctacgggacctgctggccagaag
ggtgacagtggtcttccagggcctcctgggcctccgggtccaccaggtgaagtcatacag
cctttaccaatcttgtcacccaaaaaaacaagaagacatgctgaaagcacgcaagcagat
gcaggtgataatattctggattacaatgatggaatggaggaaatatttggttccctcaat
tccttgaaacaagacatcgagcatatgaagtttccaatggggacacagaccaatccagcc
cgaacttgcaaagatctgcaactcagccaccctgacttcccagatggtgaatattggatt
gatcccaaccaaggttgctcaggagattccttcaaagtttactgtaatttcacatctggt
ggtgagacttgcatttatccagacaaaaaatcggagggagtaagaatttcatcatggcca
aaggagaaaccaggaagctggtttagtgaatttaagagaggaaaactgctttcatattta
gatatcgaaggcaattccattaatatggtgcaaatgacatttctgaaactgctgactgcc
tctgctcggcaaaatttcacctattactgtcatcagtcagtggcctggtatgatgtgtca
tcaggaagctatgacaaagcacttcggttcttgggatcaaatgatgaggagatgtcctat
gacaacaacccttacatcaaagccctatttgatggctgtgcgtccagaaaaggctatgaa
aagactgtgattgaaatcaatacaccgaaaattgatcaagtacctatcgttgatgtaatg
atcaatgactttggtgatcagaatcagaagtttggatttgaagttggtcctgtttgtttt
cttggctaa
DBGET
integrated database retrieval system