Bos mutus (wild yak): 102278077 Help Entry 102278077         CDS       T02919                                  Symbol COL12A1 Name (RefSeq) collagen type XII alpha 1 chain   KO K08132   collagen type XII alpha Organism bom  Bos mutus (wild yak) Pathway bom04974   Protein digestion and absorption Brite KEGG Orthology (KO) [BR:bom00001]  09150 Organismal Systems   09154 Digestive system    04974 Protein digestion and absorption     102278077 (COL12A1)  09180 Brite Hierarchies   09183 Protein families: signaling and cellular processes    00535 Proteoglycans [BR:bom00535]     102278077 (COL12A1) Proteoglycans [BR:bom00535]  Extracellular matrix (ECM) proteoglycans   Others    102278077 (COL12A1) BRITE hierarchy SSDB OrthologParalogGFIT Motif Pfam:  fn3 VWA VWA_2 Pur_ac_phosph_N Collagen Interfer-bind DUF4998 Copine Toxin_R_bind_N Motif Other DBs NCBI-GeneID:  102278077 NCBI-ProteinID:  XP_014335954 LinkDB All DBs Position Un AA seq 3122 aa AA seqDB search MRIRLPPALAALGAALLLSSIEAEVEPPSDLNFKIIDENTVHMSWAIPPDPIVGFKITVD PTTDGPTKEFTLSASTTETLLTELIPEIEYVVTITSYDEVEESVPVIGQLTIQTGGPTKP GEKKPGKTEIQKCSVSAWTDLVFLVDGSWSVGRNNFKYILDFIAALVSAFDIGEEKTRVG VVQYSSDTRTEFNLNQYYQQEELLAAIKKIPYKGGNTMTGEAIDYLIKNTFTESAGARVG FPKVAIIITDGKSQDEVEIPARELRNIGVEVFSLGIKAADAKELKQIASTPSLNHVFNVA NFDAIVDIQNEIISQVCSGVDEQLGELVSGEEVVEPPSNLIATEVSSKYVKLSWSPSPSA VTGYKVLLIPMTTGSRQHALSVGPQTTTLSVRDLSADTEYQISVSAMKGLTSSEPVSIME KTQPMKVQVECSRGVDIKADIVFLVDGSYSIGIANFVKVRAFLEVLVKSFEISPNRVQIS LVQYSRDPHTEFTLKKFTKVEDIIEAINTFPYRGGSTNTGKAMTYVREKIFVPSKGSRSN VPKVMILITDGKSSDAFRDPAIKLRNSDVEIFAVGVKDAVRSELEAIASPPAETHVFTVE DFDAFQRISFELTQSICLRIEQELAAIKKKAYVPPKDINFSEVTSNSLKTSWSPAGENVF SYHITYKEATGDDEVTLVEPASSTSVVLSNLKPETLYLVNVTAEYEDGFSIPLAGEETTA EVKGAPRNLKVTDETTDSFKITWTQAPGRVLRYRIIYRPVAGGESKEVTTPANQRRRTLE NLTPDTKYEVSVIPEYVSGPGSPLTGNAATEEVRGNPRDLRVSDPTTSTMKLSWTRAPGK VKQYLITYTPVAGGDTQEVTVKGDTASTVLRGLNEGTQYALSVTALYASGAGDALFGEGT TLEERGSPGDLITKDITDTSIGAYWTSAPGMVRGYRVSWQSLYDDIETGEKSLPADVIHT VIENLQPETKYRVSIFATYSSGEGEPLSGEAMTELSEDSKTLKVDEETENTMRVTWKPAP GKVVNYRVMYRPRGGGRQMVAKVSPTVTSTVLKRLQPQTTYDITVLPVYKTGEGKLRQGS GTTASRFKSPRNLKTSDPTMSSFRVTWEPAPGEVKGYKVTFHPTGDDRRLGELVVGPYDN TVVLEELRAGTTYKVNVFGMFDGGESSPLVGQEMTTLSDTTVMPILSSGMECLTRAEADI VLLVDGSWSIGRANFRTVRSFISRIVEVFEIGPKRVQIALAQYSGDPRTEWQLNAHKDKK SLLQAVANLPYKGGNTLTGMALNFIRQQSFKTQAGMRPRARKIGVLITDGKSQDDVEAPS KKLKDEGVELFAIGIKNADEVELKMIATDPDDIHAYNVADFDSLSRIVDDLTNNLCNSVK GPGDLEAPSNLVLSERTHRSMRVSWTPPSDSVDRYKVEYYPVSGGKRQEFYVSRLERSTV LKDLKPETEYVVNVYSVVEDEYSEPLKGTEKTLPVPVVSLNIYDIGSTTMHVQWQPVGGA TGYTVTYEPINATVPTKPKEMRLEPTVNDVQLSDLFPNTEYAVTVQAVLHDLTSEPVTAR EVTLPLPSPRDLKLRDVTHSTMNVAWEPAPGKVRKYIVRYKTPEEEAKEVEVDRSRASTP LKDLFSQTLYTVSVSAVYEEGESPPVTAQETTHTVPAPTNLQITEVTPESFRGTWDHGAS DVSLYRITWAPSGSADKMETILNGDENTLVFQNLNPNTLYEVSVTAIYPDESESDDLIGS ERTLRLIPLTTQAPKSGPRNLQVYNATSNSLTVKWDPASGRVQKYRITYQPSTGEGNEQT TTIGGRQNSVLLQKLKPDTPYTITVSSLYPDGEGGRMTGRGKTKPLNTVRNLRVYDPSTS SLNVRWDHAEGSPRQYKLFYAPTAGGPEELVPIPGNTNYAILRNLQPDTQYTVTVVPVYS EGDGGRTSDTGRTLVRGLARNVQVYNPTPNSLDVRWDSAPGPVQQYRIVYSPQDGTRPSE SIVVPGNTYTVHLEQLIPDTPYSVNIVALYSDAEGNPSPAQGRTLPRSGPRNLRVFGETT NSLSVAWDHADGPVQQYRIIYSPTVGDPIDEYTTVPGRRNNVILQPLQPDTPYKITVIPV YEDGDGTHLTGNGRTVGLLPPQNIHISDEWYTRFRVSWDPSPSPVLGYKIVYKPVGSNEP MEVFVGEVTSYTLHNLNPSTTYDVNVYAQYDSGLSVPLTDQGTTLYLNVTDLKTYQVGWD TFCVRWLAHRAATSYRLKLSPADGTRGQEITVRGSETSHCFTDLSPETDYGVTVFVQTPN LEGPGVSVKERTTLKPTEAPTEPPTPPPPPTIPPAREVCKGAKADIVFLTDASWSIGDDN FNKVVKFIFHTVGGFDEISPAGIQVSFVQYSDEVKSEFKLNTYNDKALALGALQNIRYRG GNTRTGKALTFIKEKVLTWESGMRKNVPKVLVVVTDGRSQDEVKKAALVIQQSGFSVFVV GVADVDYNELANIASKPSERHVFIVDDFESFEKIEDNLITFVCETATSSCPLIYLDGYTS PGFKMLEAYNLTEKNFASVQGVSLESGSFPSYSSYRLQKNAFVNQPTVELHPNGLPPSYT IILLFRLLPETPSDPFAIWQITDRDYKPQVGVIADPSSKTLSFFNKDTRGEVQTVTFDTD EVKALFYGSFHKVHIVVTSKSVKIYIDCYEIVEKDIKEAGNITTDGYEILGKLLKGERKS ATFQIQNFDIVCSPVWTSRDRCCDIPSRRDEAKCPAXXXXXXXLPNACTCTQDSVGPPGP PGPAGGPGAKGPRGERGVSGAVGPPGPRGDTGPPGPQGPPGPQGPNGLSIPGEQGRQGMK GDAGEPGLPGRTGTPGLPGPPGPMGPPGDRGFTGKDGAMGPRGPPGPPGSPGSPGVTGPS GKPGKPGDHGRPGPSGLKGEKGDRGDIASQNMMRAVARQVCEQLISGQMNRFNQMLNQIP NDYHSSRNQPGPPGPPGPPGSAGARGEPGPGGRPGFPGTPGMQGPQGERGLPGEKGERGI GSPGPRGLPGPPGPQGESRTGPPGSTGSRGPPGPPGRPGNSGIRGPPGPPGYCDSSQCAS IPYNGQGYPEPYVPEGGHEPFIVPVEPERTADEYEDYGADEPAGEHPPHARWRRALPHRP RQ NT seq 9369 nt NT seq  +upstreamnt  +downstreamnt atgcggatcaggcttcccccagcgctcgcggccctgggcgcggccctgctcctgtcttcc atcgaggcagaagttgaaccaccttcagacttgaattttaaaattatagatgaaaatact gttcatatgtcatgggcaataccacctgatccaattgtgggtttcaaaataacagtggac cctacaacggatgggcccactaaagaatttaccctttcagctagtaccactgaaacttta ttaacagagcttatacctgaaatagagtatgtggtgacaatcacttcatatgatgaagta gaagaaagtgtaccagttataggccaattaacaattcaaacaggtggcccgacaaagcca ggggagaagaaacctggaaaaacagagatacaaaaatgttctgtcagtgcctggactgat ttagtttttcttgtggatggctcatggagtgtgggaagaaacaatttcaagtacatctta gacttcattgctgctctcgtgtctgcttttgacattggggaagagaagacaagggttgga gttgttcagtacagctctgacaccaggacggaatttaacttaaatcagtactaccaacag gaagagctgcttgctgcaattaaaaaaatcccatacaaaggtggcaacacaatgacaggg gaagccattgattacttaattaaaaataccttcacggaatctgctggggcaagagttggc tttcccaaagtggcaattattattacagatggcaaatcccaggacgaagtggaaattcca gcaagagagcttcgaaatattggggttgaagttttctctttgggcattaaagctgcagat gcaaaagaactcaaacaaattgcctccacaccttcactcaatcatgttttcaatgtggcc aactttgatgcaattgtggatattcagaatgagatcatctcccaggtgtgctcaggtgtg gatgaacagctcggggaactggtcagtggagaagaagttgttgaacctccttcaaatttg attgccacggaagtctcgtcgaaatacgttaagctaagctggagtccatctcctagcgca gtgactggctataaagttctccttatacccatgaccacgggaagccgacagcacgctctg agtgtgggacctcagacgaccacgctcagcgtccgtgacctctcagcagacacggaatac cagatcagcgtttctgccatgaagggactgacatccagtgagcccgtttcaataatggag aagactcaaccaatgaaagttcaagtggaatgttcacgtggtgtggatataaaagccgat attgtgtttttggttgatggttcctatagcattgggattgcaaactttgttaaagttagg gcctttttggaagttcttgtaaaaagttttgagatttcaccaaatagggtacagataagt cttgtccagtacagccgggatcctcatactgaattcacattgaaaaaattcaccaaagtt gaagatataattgaagcaataaacactttcccgtaccgaggagggtctaccaacactggg aaagcaatgacttatgtcagagagaaaatatttgtgccgagcaagggttcaagaagcaat gtcccaaaggtcatgattcttatcacagatggaaaatcttcagatgctttcagagacccg gctataaaactgaggaattcagatgttgaaatctttgctgttggtgtgaaggatgctgtt cgctcagagctagaagccatcgcctctcctcctgccgagacccatgtgttcacagtggaa gattttgatgcttttcagaggatatcttttgaactcacacagtctatatgccttagaatt gaacaagaattggcagccataaagaaaaaagcttatgtgcctccaaaggatattaatttt tctgaggtgacttccaacagtttgaaaaccagctggtctcctgctggagaaaacgttttt tcataccacatcacctacaaagaagctactggggatgatgaagtgacgttggtggagcca gcctcgagcaccagtgtggtcctcagcaacctgaaaccagagaccctgtacctggtcaat gtgaccgcggagtacgaggatggcttcagcatccccttagctggagaggagaccaccgca gaagtgaaaggagcacctcgaaacctaaaggtgacagacgagactacggatagctttaaa attacctggactcaagctccggggagagtcttaaggtaccgaattatttatagacctgtt gctggtggagaaagcaaagaagttaccactccagccaatcagaggaggagaacgctggag aacctgactccagacacaaaatatgaagtatctgtaattcctgaatatgtctcgggaccc gggtctccgttgactggaaatgcagccactgaagaagttagagggaacccaagggattta cgagtttctgaccctacgacatcaacaatgaaactgtcttggacgagggcaccaggaaag gtgaaacagtatctcatcacatacacaccggtggcaggaggtgacactcaagaggtcact gtgaagggagacacagcgagtactgtcctgagaggattaaacgaagggacgcagtatgcc ttatctgtgacagccttgtatgcctctggagctggagatgccctttttggagaagggaca acacttgaagagcgcggttcacctggagatttgattactaaagatatcacggacacatcg attggggcttattggacgtcagctccaggaatggttcgcggttacagggtctcttggcaa tcactttatgatgatatagagactggagaaaagagtcttcctgcagatgtaattcatact gtgatagaaaacctgcagccagagaccaagtacagagtttccatatttgcaacttacagt agtggagaaggggaacccttgagtggagaagccatgactgaattgtctgaagactcaaaa accttgaaagtggatgaagaaacagaaaacacaatgagagttacctggaaaccagcacct gggaaagttgtcaactaccgtgttatgtatcgcccccgtgggggtgggaggcagatggtc gccaaagtgtcacccacagtcacctcaaccgtgttaaagcgacttcagccccagaccacg tatgacatcacagttctcccagtttacaagacaggggaaggaaagcttaggcaaggatcg ggaacaacagcttctcgatttaaatcacccagaaacctcaaaacatctgatccaaccatg tcaagcttccgggtgacttgggagcctgcacccggtgaggtcaagggttacaaggtcacg tttcatcccacgggagatgacagaagactgggggagttggtggttggaccgtatgacaac acagttgttctagaggaacttagggcaggtaccacctataaagtaaacgtttttggaatg tttgatggaggagaaagttcaccacttgttggacaagaaatgacaactctttctgacaca actgtaatgccaattttatcctctgggatggagtgtctcacccgggctgaagcagacatc gtgctgctggtggatggatcgtggagcatcggccgggcgaactttagaaccgtcaggagc ttcatttctcgtatcgtggaagtctttgagattggccccaaaagagtacagattgccctc gcgcagtatagtggggaccccagaacagagtggcagctaaatgctcacaaagacaagaag agcttgctgcaggccgtggcgaacctgccttacaaaggaggcaacaccctcacagggatg gccttgaatttcattcgccagcagagcttcaagacccaagctggcatgagacctcgagct cgaaaaatcggtgttcttatcactgatggaaaatcccaggatgatgtagaggcaccttcc aaaaaactcaaggatgaaggcgtggaactgtttgccattggtattaaaaatgctgatgaa gttgagttaaagatgattgcaacagatcctgatgatatccacgcgtacaacgtggcggat tttgattcactttctaggatcgtggatgacctcaccaacaacttgtgtaacagtgtcaaa ggtccaggtgacttggaagcgccttccaacctagttctttctgagcggacccatcgttct atgagagtgagctggacacctccttctgacagcgtggacaggtacaaggtggaatactac ccagtgtcaggagggaaacggcaagaattttatgtgagccgattggaaaggagcacggtc ctgaaagatctgaagcctgaaactgaatatgttgtcaatgtgtattctgtagtggaagat gaatacagtgagcctctgaagggcacagaaaaaacattgccagtgcctgtggtcagcctg aacatttacgacattggctcaaccaccatgcacgtgcagtggcagccagtggggggcgct actggctacactgtgacctacgaacccatcaatgccacagttccgaccaagcccaaagag atgcgcctggagccgacagtgaatgatgtgcagctgagtgacctcttccccaacaccgag tatgcagttacagtccaggctgtcctgcatgacctcaccagtgaacccgtcacagcaagg gaagtcaccttgcctctgcccagtccccgagacctgaaactcagagacgtgactcacagc accatgaacgtcgcatgggaacccgcacctggaaaagtgcgaaaatacatcgttcgctac aaaaccccagaagaggaagccaaagaggtagaggtggacaggtcacgggccagcacacca cttaaagacctcttctcacaaaccctgtacacagtcagcgtgtctgctgtatacgaagag ggggagtctcccccagtgactgcgcaggaaaccacccacaccgtgccagccccaacaaac ctacagattactgaagtaacaccagagagtttcagagggacttgggaccatggagcttct gatgtgtctctctatagaatcacctgggcgccttcaggaagcgcagataagatggagacc atcctaaatggagatgagaatactctggtgtttcaaaacctgaaccccaacactctctat gaagtttctgttaccgccatttatcctgatgagtcagaaagcgatgacctgattggcagt gagcgtacactgcgtttgatacccttaacaacacaagctccaaagagtggcccacgaaac cttcaggtgtacaatgcaacatccaatagcttgactgttaagtgggatcccgctagtggt cgtgtgcagaaatacagaatcacctaccagccttcgacaggggaaggcaatgaacaaacg accactataggaggacggcagaacagtgttctgctgcagaagctgaagcctgacactcct tacaccatcactgtgtcctccctgtatccggacggcgaaggtggtcgcatgacgggaaga ggcaagaccaaacctttgaataccgtgaggaacctcagagtgtacgacccttccaccagc agtttgaatgttcgctgggaccacgctgagggcagtcctcgccagtacaagctcttctac gcacccacagcagggggcccggaggaactggtaccaatccctgggaataccaattatgcc attcttaggaatctacagccggatacccaatacaccgttacagtggtgcctgtttattct gaaggtgacggaggacgcacgtcagatactggaaggacactggtgagagggctggcaaga aacgtccaagtgtacaatccgacaccaaacagcctggacgttcgctgggactcggcacct ggcccagttcagcagtatcgcattgtgtattcacctcaggatggtacaagaccctccgaa tctattgtggtgccaggaaatacctacacggtgcacttggagcagctgattccggacacg ccctattctgtgaacatcgtcgcgctctactcagatgccgaagggaatcccagccctgcc cagggccgcacattaccacgaagtggaccaagaaatctcagagtctttggggagaccacc aacagcctctcggtagcctgggatcacgctgacgggccggttcaacaatacaggatcatt tattctcccactgttggtgacccgattgatgaatataccaccgtcccaggcagaagaaac aacgtaattctccagcccctgcagcctgatactccgtataaaattactgttattcctgtt tatgaagatggagatggtacccatttgactggaaatggaagaactgtgggattacttcct cctcagaacatacacatctctgatgaatggtataccagattcagggtgtcctgggatcct tcaccctctcctgttcttggatataaaattgtgtataagccagtgggttccaatgagccc atggaagtttttgttggagaagtgacatcatacacattacacaatctgaaccccagcacc acctatgatgtgaatgtctacgctcagtatgattctggactcagtgttcctctgaccgac caaggcactacattatatttgaatgtgacggatctgaaaacttatcaagtcgggtgggat acattctgtgtcagatggttggctcaccgagcagccacttcctacagactaaaactaagc cccgcagatggaaccagaggacaggaaatcacagtgcgtggatcagaaaccagtcactgc ttcaccgacctgtcaccagaaactgattatggcgtcactgtctttgtgcagacaccaaat cttgagggaccaggtgtttcagtcaaagaacgtactaccttaaaaccaacggaagccccg acagagccacccacaccccctcctcctcctacaattccaccagcccgggaagtgtgcaaa ggggccaaagcagatattgtattcctgaccgatgcttcctggagtattggggatgataat tttaacaaagttgtaaaattcatcttccataccgtgggaggctttgatgaaatcagtcct gctggaattcaggtctcatttgtgcagtacagtgacgaggtcaagtctgagtttaagctg aacacatacaacgacaaggccctggccctgggggccctccagaacattcggtacagagga ggaaacacaagaacaggcaaggctctgacctttatcaaggagaaggtgttgacctgggag agcggcatgaggaagaatgtccccaaggtgctggttgtagtcacggatggtcggtcgcag gatgaggtcaagaaggcggctttggtcatccagcagtcagggttcagcgtctttgtagtt ggtgtggctgatgtcgactacaatgaacttgccaacatagcgagcaaaccaagcgaacgg catgtgttcatcgtggatgactttgaatcttttgagaagatcgaggacaacctcatcaca tttgtgtgtgaaactgccacttcaagttgccctctcatttatttggatggctacacctca ccaggttttaagatgcttgaagcgtacaatctgacagaaaagaattttgcttctgtgcaa ggagtctccctggagtcaggctctttccccagctactcatcttacaggcttcagaagaac gcctttgtgaaccagcctacagtagaactacatcccaatggactccctccttcatataca attatattactattcagactcctcccagaaactcccagcgacccttttgcaatttggcag atcacagacagagactataaaccacaagttggtgtgattgcagatccttctagcaagaca ttatcattctttaacaaggatacaagaggtgaggtgcagactgttacatttgacacagat gaagtgaaggcattattttatggaagttttcataaggttcatatcgtagtgacctcgaaa agtgttaagatttacatcgactgctatgagattgtagagaaggatatcaaggaagctgga aatatcaccactgacggttatgaaattcttggaaaactgcttaaaggggagaggaagtca gccacattccaaatccagaattttgatattgtctgcagtccggtgtggaccagtagagac agatgttgtgatattccctccagaagagatgaagcaaaatgcccagctnnnnnnnnnnnn nnnnnnnnncttccgaacgcttgcacgtgtacacaggacagcgttggacctccgggaccc cccggccctgcaggaggacctggtgctaaaggtccgagaggtgaaagaggtgtcagtggg gcagttggcccccccggtcctcgtggagatacaggtcctcctgggccccagggtcctcca ggccctcagggacccaatggcctctctattcccggtgaacaaggtcgccagggaatgaag ggcgatgccggagagccaggacttccaggcaggactggaactccaggattacctggccca ccaggaccaatgggccctccaggagacagaggctttactggaaaagatggagcaatggga cccaggggtccccctggaccaccgggaagtccaggctctccaggagtcacaggaccaagt gggaaaccaggaaagcccggagatcacggcagaccaggtccatcaggactgaaaggagag aaaggcgacagaggagacatcgcttcccagaacatgatgcgagcagttgcaagacaagtc tgtgaacaattgataagtggtcagatgaacagattcaatcagatgctgaaccagattcca aatgattaccactctagtcgcaaccagccaggccctccaggccccccaggcccccccggc agcgcaggagccagaggagaaccaggacctggggggcggcctggcttcccaggcacacca gggatgcaggggccccagggggaacgaggtttgccgggagagaaaggtgaaaggggtatt ggatctccaggacctcgagggctgcctggccccccaggtccacaaggagaatcgaggacg ggtccaccagggtccacaggttccagaggtcctccaggtccccctggtcgtcctggaaac tcaggtatccgaggccccccgggtcctcctggatactgtgactcatcccagtgtgccagc atcccatacaatggacaaggctatccagagccctacgtgcccgagggcgggcacgagccc ttcatcgtgccggtggagcctgagcggacagcggacgagtacgaggactacggcgccgac gagcccgcaggcgagcatcctccccacgcgcgctggcggcgcgccctgccccaccgcccc cggcagtga

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