Bos mutus (wild yak): 102283365
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Entry
102283365 CDS
T02919
Symbol
SNRNP200
Name
(RefSeq) small nuclear ribonucleoprotein U5 subunit 200
KO
K12854
pre-mRNA-splicing helicase BRR2 [EC:
5.6.2.6
]
Organism
bom
Bos mutus (wild yak)
Pathway
bom03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
bom00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
102283365 (SNRNP200)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
bom03041
]
102283365 (SNRNP200)
Enzymes [BR:
bom01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.6 RNA 3'-5' helicase
102283365 (SNRNP200)
Spliceosome [BR:
bom03041
]
Complex B
U4/U6.U5 tri-snRNP components
U5 snRNP specific factors
102283365 (SNRNP200)
Complex C
U5 SnRNP specific factors
102283365 (SNRNP200)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Sec63
DEAD
Helicase_PWI
ResIII
Helicase_C
BRR2_plug
AAA_22
AAA_30
PhoH
SWI2_SNF2
Sigma54_activ_2
DUF603
Motif
Other DBs
NCBI-GeneID:
102283365
NCBI-ProteinID:
XP_005891670
UniProt:
L8IRZ5
LinkDB
All DBs
Position
Un
AA seq
2136 aa
AA seq
DB search
MADVTARSLQYEYKANSNLVLQADRSLIDRTRRDEPTGEVLSLVGKLEGTRMGDKAQRTK
PQMQEERRAKRRKRDEDRHDINKMKGYTLLSEGIDEMVGIIYKPKTKETRETYEVLLSFI
QAALGDQPRDILCGAADEVLAVLKNEKLRDKERRKEIDLLLGQTDDTRYHVLVNLGKKIT
DYGGDKEIQNMDDNIDETYGVNVQFESDEEEGDEDVYGEVREEASDDDMEGDEAVVRCTL
SANLVASGELMSSKKKDLHPRDIDAFWLQRQLSRFYDDAIVSQKKADEVLEILKTASDDR
ECENQLVLLLGFNTFDFIKVLRQHRMMILYCTLLASAQSEAEKERIMGKMEADPELSKFL
YQLHETEKEDLIREERSRRERVRQSRMDTDLETMDLDQGGEALAPRQVLDLEDLVFTQGS
HFMANKRCQLPDGSFRRQRKGYEEVHVPALKPKPFGSEEQLLPVEKLPKYAQAGFEGFKT
LNRIQSKLYRAALETDENLLLCAPTGAGKTNVALMCMLREIGKHINMDGTINVDDFKIIY
IAPMRSLVQEMVGSFGKRLATYGITVAELTGDHQLCKEEISATQIIVCTPEKWDIITRKG
GERTYTQLVRLVILDEIHLLHDDRGPVLEALVARAIRNIEMTQEDVRLIGLSATLPNYED
VATFLRVDPAKGLFYFDNSFRPVPLEQTYVGITEKKAIKRFQIMNEIVYEKIMEHAGKNQ
VLVFVHSRKETGKTARAIRDMCLEKDTLGLFLREGSASTEVLRTEAEQCKNLELKDLLPY
GFAIHHAGMTRVDRTLVEDLFADKHIQVLVSTATLAWGVNLPAHTVIIKGTQVYSPEKGR
WTELGALDILQMLGRAGRPQYDTKGEGILITSHGELQYYLSLLNQQLPIESQMVSKLPDM
LNAEVVLGNVQNAKDAVNWLGYAYLYIRMLRSPTLYGISHDDLKGDPLLDQRRLDLVHTA
ALMLDKNNLVKYDKKTGNFQVTELGRIASHYYITNDTVQTYNQLLKPTLSEIELFRVFSL
SSEFKNITVREEEKLELQKLLERVPIPVKESIEEPSAKINVLLQAFISQLKLEGFALMAD
MVYVTQSAGRLMRAIFEIVLNRGWAQLTDKTLNLCKMIDKRMWQSMCPLRQFRKLPEEVV
KKIEKKNFPFERLYDLNHNEIGELIRMPKMGKTIHKYVHLFPKLELSVHLQPITRSTLKV
ELTITPDFQWDEKVHGSSEAFWILVEDVDSEVILHHEYFLLKAKYAQDEHLITFFVPVFE
PLPPQYFIRVVSDRWLSCETQLPVSFRHLILPEKYPPPTELLDLQPLPVSALRNSAFESL
YQDKFPFFNPIQTQVFNTVYNSDDNVFVGAPTGSGKTICAEFAILRMLLQNSEGRCVYIT
PMEALAEQVYMDWYEKFQDRLSKKVVLLTGETSTDLKLLGKGNIIISTPEKWDILSRRWK
QRKNVQNINLFVVDEVHLIGGENGPVLEVICSRMRYISSQIERPIRIVALSSSLSNAKDV
AHWLGCSATSTFNFHPNVRPVPLELHIQGFNISHTQTRLLSMAKPVYHAITKHSPKKPVI
VFVPSRKQTRLTAIDILTTCAADIQRQRFLHCTEKDLIPYLEKLSDSTLKETLLNGVGYL
HEGLSPLERRLVEQLFSSGAIQVVVASRSLCWGMNVAAHLVIIMDTQYYNGKIHAYVDYP
IYDVLQMVGHANRPLQDDEGRCVIMCQGSKKDFFKKFLYEPLPVESHLDHCMHDHFNAEI
VTKTIENKQDAVDYLTWTFLYRRMTQNPNYYNLQGISHRHLSDHLSELVEQTLSDLEQSK
CISVEDEMDVAPLNLGMIAAYYYINYTTIELFSMSLNAKTKVRGLIEIISNAAEYENIPI
RHHEDSLLRQLAQKVPHKLNNPKFNDPHVKTNLLLQAHLSRMQLSAELQSDTEEILSKAI
RLIQACVDVLSSNGWLSPALAAMELAQMATQAMWSKDSYLKQLPHFTSEHIKRCTDKGVE
SVFDIMEMEDEERNALLQLSDSQIADVARFCNRYPNIELSYEVVDKDAIRSGGPVVVLVQ
LEREEEVTGPVIAPLFPQKREEGWWVVIGDAKSNSLISIKRLTLQQKAKVKLDFVAPATG
AHNYTLYFMSDAYMGCDQEYKFSVDVKEAETDSDSD
NT seq
6411 nt
NT seq
+upstream
nt +downstream
nt
atggcggatgtaaccgcccgtagcctgcagtacgagtacaaagcgaactcgaatcttgtt
ctccaagctgatcgctctctcattgaccggacccgccgggatgaacccacaggagaagtg
ctgtccctggttgggaagctggagggtacccggatgggagataaggctcaacgaaccaaa
ccacagatgcaagaggaaagacgagctaagcgaagaaagcgtgatgaggaccggcatgac
atcaacaagatgaagggctatactctgctctcagagggcatcgatgagatggtgggcatc
atctataagcccaagaccaaggagacccgggagacctatgaagtgctgctcagtttcatc
caggctgcccttggggaccagccacgtgatattctttgtggggcagcagatgaagttctc
gctgttttaaagaatgaaaagcttcgggacaaggaaaggagaaaagagattgatctgctg
ctgggtcagacagatgataccagataccatgtgctagtaaacttgggcaaaaagatcaca
gactacggtggagacaaggagatccagaatatggacgacaacattgatgagacatatggt
gtgaatgtacagtttgagtctgatgaggaggaaggtgatgaagatgtgtacggggaggtt
cgtgaagaggcgtctgacgacgacatggaaggggatgaggccgtggtgcgctgcaccctc
tcagctaatcttgtggcctcaggggaactgatgagttccaagaagaaggatctgcaccct
cgggacattgatgccttttggcttcagcggcagctcagtcgcttctacgatgatgccatt
gtgtcacagaagaaggcagatgaggtgttggagattttgaagacagccagcgatgaccgg
gagtgtgagaaccagctggttctgctcctcggtttcaacacttttgattttatcaaggtg
ttgcggcagcacaggatgatgattttgtactgcaccttgctggccagtgcacagagtgaa
gctgaaaaggagaggatcatgggcaagatggaggctgacccagagctgtccaagttcctc
taccagctgcacgaaacggagaaggaggacctaatccgggaggaacggtcccgcagagag
cgagtacgtcagtcccggatggacacggacctggaaaccatggatctggaccagggcgga
gaggcactggctccgcggcaggttctggacttggaggaccttgtatttacccaggggagc
cactttatggccaacaaacgctgccagcttcctgacgggtccttccggcgccagcgcaag
ggctacgaagaggtgcacgtgcctgccctgaagcccaagcccttcggctctgaagaacaa
cttcttccagtggagaagctgcccaagtatgcccaggctggctttgagggcttcaaaacc
ctgaatcggatccagagtaagctctaccgtgccgccctggagacggatgaaaatctgctg
ctctgcgctcctacaggtgccgggaagaccaatgtggccctgatgtgtatgctccgagag
ataggcaagcacattaacatggacggcaccatcaacgtggacgacttcaagatcatctat
atcgcccccatgcggtctctggtgcaggagatggtgggcagttttggaaagcgcctggcc
acatatggcatcactgttgcggagctgactggtgaccaccagctgtgtaaggaggagatc
agcgccacccagatcatcgtctgcacccccgagaagtgggacatcattacccgcaagggt
ggggaacgcacctacacccagctcgtgcggctcgtcatcctggatgagatccatcttctc
catgatgacagaggtcctgtcctagaagcgttggtggccagggccatccggaacattgaa
atgacccaggaggacgtccgcctcattggccttagcgccaccctccccaactatgaagat
gtggctacctttctacgtgtagatcctgccaagggcctcttctactttgacaacagcttc
cgcccagtgcctctagaacagacgtatgtgggcatcacggagaagaaagccatcaagcgt
ttccaaatcatgaatgaaattgtctatgagaaaatcatggaacatgctggaaaaaatcag
gtactggtatttgtgcactcccggaaggagaccgggaagacagccagggccatccgggac
atgtgcctggagaaggacacgctgggtctgtttctgagagagggctcggcctccacagag
gtcctccggacagaagctgagcagtgcaagaacctggagctgaaggacctgctgccctat
ggctttgctatccatcacgcgggcatgaccagagttgaccggacacttgtcgaggatctc
tttgctgataaacacatccaggttttagtttccacggcaaccctggcttggggtgtgaac
ctccctgcccacaccgtcatcatcaaaggcacccaggtgtacagtcccgagaagggccgc
tggactgagctgggagcgctggacatcctgcaaatgctgggacgagcgggccggccgcag
tacgacaccaagggcgaaggcatcctcatcacctcgcacggggagctgcagtactacctg
tcgctgctcaaccagcagcttcccattgagagccagatggtatccaagctgcccgacatg
ctcaacgccgaggtcgtgctggggaacgtgcagaacgcaaaggatgcagtgaactggctg
ggctacgcctacctgtacatccgaatgctccggtccccgaccctctatggcatctctcat
gatgacctcaagggagacccactgctagaccagcgccgactggatctggttcataccgct
gccttgatgctggataagaacaacctggtcaagtacgacaagaagacaggcaacttccag
gtgacagaactgggccgtatagccagccactactacatcaccaatgacacggtgcagact
tataaccagcttctaaagcccaccctgagcgagatcgagctcttcagagtcttctcgttg
tcttcagagttcaagaacatcactgtgagagaggaggagaaactggagctgcagaagttg
ctggagagggtgcccatccccgtcaaggagagcattgaggagcccagtgcaaagatcaat
gtgctgctccaggctttcatctcgcagctgaagctggagggctttgcgctgatggccgac
atggtctatgttactcagtcggctggccgcttgatgcgggccatctttgaaattgtcctg
aaccgcgggtgggcacagcttacagacaagaccctgaacctctgcaagatgatcgacaaa
cgcatgtggcagtccatgtgtcctctgcgccagttccggaaactccctgaggaggtcgtg
aagaagattgagaagaagaacttcccctttgagcgtctgtacgacctgaatcacaatgag
ataggcgagctcatccgcatgcccaagatggggaagaccatccacaagtatgtccacctc
ttccccaagctggagctgtcggtgcacctccagccaatcacgcgctccaccctgaaggtg
gagctgaccatcacgcccgacttccagtgggatgagaaggtccacggttcgtcggaggcc
ttctggattcttgtggaagacgtggacagtgaggtgatccttcaccacgagtacttcctg
ctcaaggccaagtatgcccaggacgagcacctcatcacgttcttcgtgcccgtctttgag
ccgctgccccctcagtacttcatccgtgtggtgtctgaccgctggctttcttgtgagacc
cagctgcccgtctctttccggcacctgatcctgccagagaagtacccacccccaaccgag
ctgctagaccttcagcccttgcctgtgtctgccctgagaaatagcgcctttgagagcctc
taccaggataaatttcctttcttcaaccccatccagacccaggtgttcaacaccgtgtac
aacagcgatgacaacgtgtttgtgggggcccccacgggcagcgggaagaccatctgtgcg
gagtttgccatcctgcggatgctgctgcagaactcggagggccgctgtgtctacatcacc
cccatggaggccctcgccgaacaggtgtacatggactggtacgagaagttccaggacagg
ctcagcaagaaggtggtgctcctgacgggggagaccagcacagacctgaagctcctgggc
aaaggcaacatcatcatcagcacacccgagaagtgggacatcctctcccggcggtggaag
cagcgcaagaacgtgcagaacattaacctcttcgtggtggatgaggtccacctcatcggg
ggcgagaacgggcccgtcctggaggtcatctgttcccggatgcgctacatctcctcccag
atcgagcggcccatccgcatcgtggctctcagctcctcgctctccaacgcgaaggacgtg
gcccactggctgggctgcagcgccacctccaccttcaacttccacccgaacgtgcgcccc
gtgcccttggagctgcacatccagggcttcaacatcagccacacgcagactcgcctgctg
tccatggccaagcctgtgtaccacgccatcaccaagcactcgcccaagaagcccgtcatc
gtcttcgtgccctcccgcaagcagacgcgcctcaccgccatcgacatcctcaccacgtgc
gcagccgacatccagcgccagagattcctgcactgcactgagaaggacctgatcccgtac
ctggagaaactgagcgacagcacgctcaaggagacgctgctgaacggagtcggctacctg
catgaggggctcagccccctagagcggcgcctggtggagcagctcttcagctcaggggcc
atccaggtggtggtcgcttctcggagtctctgctggggcatgaatgtggccgcgcacctg
gtgatcatcatggacacccagtactacaacggcaagatccacgcgtacgtggattacccc
atctacgatgttctgcagatggtgggccatgccaaccgccctctgcaggatgatgagggg
cgctgcgtcatcatgtgccagggctccaagaaggatttcttcaagaagttcttgtatgag
cctttgccggtggagtctcacctggaccactgtatgcacgaccacttcaacgccgagatc
gtcaccaagaccatcgagaacaagcaggatgccgtggactacctcacctggaccttcctg
taccgccgcatgacgcagaaccccaactactacaacctgcagggcatctcccatcgtcac
ctgtctgaccacttgtcggagctcgtggagcagaccctgagtgacctggagcagtccaag
tgcatcagcgttgaggacgagatggacgtggcacccctgaacctaggcatgatcgccgcc
tactattacatcaactacaccaccatcgagctcttcagcatgtccctgaacgccaagacc
aaggtgcgaggactcatcgagatcatctccaacgcggctgagtatgagaacatccccatc
cgtcaccacgaggacagcctcctgcggcagctggcccagaaggtcccccacaagctgaat
aaccctaagttcaacgacccgcacgtcaagaccaacctgcttctgcaggcccacctgtcc
cgcatgcagctgagtgccgagctgcagtcggacacagaggagatcctcagcaaggccatc
cggctcatccaggcctgtgtggacgtcctctctagcaacgggtggctcagccccgccctg
gcggccatggagctggcccagatggccacccaagccatgtggtccaaggactcctacctg
aaacagctgccgcacttcacctccgagcacatcaaacgttgcacagacaagggggtggag
agtgttttcgacatcatggaaatggaggacgaagagcgcaacgccttgctgcagctgtcg
gacagccagatcgcggacgtggcccgcttctgtaaccgctaccccaacatcgagctgtcc
tatgaggtggtggacaaggatgccatccgcagtggcgggccagtcgtcgtgctggtgcag
ctggagcgggaggaggaagtcacgggccctgtgatcgcgcctctcttcccgcagaaacgt
gaagagggctggtgggtggtgatcggagacgccaagtccaacagtctcatctccatcaag
aggctgaccctgcagcagaaggccaaggtgaaactcgacttcgtggccccggccactggc
gcccacaactacaccctgtatttcatgagtgacgcttacatggggtgtgaccaggagtac
aaattcagtgtggatgtgaaagaagccgagacagacagtgactcagattga
DBGET
integrated database retrieval system
