KEGG   Bos mutus (wild yak): 102288279Help
Entry
102288279         CDS       T02919                                 

Gene name
SETDB1
Definition
(RefSeq) SET domain bifurcated 1
  KO
K11421  histone-lysine N-methyltransferase SETDB1 [EC:2.1.1.43]
Organism
bom  Bos mutus (wild yak)
Pathway
bom00310  Lysine degradation
bom04550  Signaling pathways regulating pluripotency of stem cells
Brite
KEGG Orthology (KO) [BR:bom00001]
 09100 Metabolism
  09105 Amino acid metabolism
   00310 Lysine degradation
    102288279 (SETDB1)
 09140 Cellular Processes
  09144 Cellular community - eukaryotes
   04550 Signaling pathways regulating pluripotency of stem cells
    102288279 (SETDB1)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03036 Chromosome and associated proteins [BR:bom03036]
    102288279 (SETDB1)
Enzymes [BR:bom01000]
 2. Transferases
  2.1  Transferring one-carbon groups
   2.1.1  Methyltransferases
    2.1.1.43  histone-lysine N-methyltransferase
     102288279 (SETDB1)
Chromosome and associated proteins [BR:bom03036]
 Eukaryotic Type
  Histone modification proteins
   HMTs (histone methyltransferases)
    HKMTs (histone lysine methyltransferases)
     102288279 (SETDB1)
  Heterochromatin formation proteins
   Other heterochromatin formation proteins
    102288279 (SETDB1)
BRITE hierarchy
SSDB OrthologParalogGFIT
Motif
Pfam: SET Pre-SET MBD DUF4537 Chromo
Motif
Other DBs
NCBI-GeneID: 102288279
NCBI-ProteinID: XP_005894978
LinkDB All DBs
Position
Un
AA seq 1321 aa AA seqDB search
MSSLPGCIGLAAATAAVESEEIAELQQSVVEELGISMEELRQFIDEELEKMDCVQQRKKQ
LAELETWVIQKESEVAHVDQLFDDASRAVTNCESLVKDFYSKLGLQYRDSSSEDEASQPT
EIIEIPDEDDDVLSIDSGDAGNRTPKDQKLREAMAALRKSAQDVQKFMDAVNKKSNSQDL
HKGTLSQMPGELSKDGDLVVSMRILGKKRTKTWHKGTLIAIQTVGSGKKYKVKFDNKGKS
LLSGNHIAYDYHPPADKLYVGSRVVAKYKDGNQVWLYAGIVAETPNVKNKLRFLIFFDDG
YASYVTQSELYPICRPLKKTWEDIEDISCRDFIEEYITAYPNRPMVLLKSGQLIKTEWEG
TWWKSRVEEVDGSLVRILFLDDKRCEWIYRGSTRLEPMFSMKTSSASALEKKQGGQLRTR
PNMGAVRSKGPVVQYTQDLTSTGTQFKPMEPPQPTAPPAPPAPPGPALSPQAGDSESLEG
QLAQSRKQVAKKSTSFRPGSVGSGHSSPTSPALSENAPGGKPGINQTYRSPLGSTTSAPA
PPAPPAPPAFHGMLERAPAEPSYRAPMEKLFYLPHVCSYTCLSRVRPMRSEQYRGKNPLL
VPLLYDFRRMTARRRVNRKMGFHVIYKTPCGLCLRTMQEIERYLFETGCDFLFLEMFCLD
PYVLVDRKFQPYKPFYYILDITYGKEDVPLSCVNEIDTTPPPQVAYSKERIPGKGVFINT
GPEFLVGCDCKDGCRDKSKCACHQLTIQATACTPGGQINPNSGYQYKRLEECLPTGVYEC
NKRCKCDPNMCTNRLVQHGLQVRLQLFKTQNKGWGIRCLDDIAKGSFVCIYAGKILTDDF
ADKEGLEMGDEYFANLDHIESVENFKEGYESDAPCSSDSSGVDLKDQEDGNSGTEDPEES
NDDSSDDNFCKDEDFSTSSVWRSYATRRQTRGQKENGLSEMSSKDSRPPDLGPPHIPVPP
SIPVGGCNPPSSEETPKNKVASWLSCNSVSEGGFADSDSRSSFKTSEGGECRTGGGRGEA
EKASTSGLGFKDEGDIKQAKKEDPDDRNRMSVVTESSRNYGYNPSPVKPEGLRRPPSKTS
MHQSRRLMASAQPNPDDILTLSSSTESEGESGTSRKPTAGQTSAAAVDSDDIQTISSGSE
GDDFEDKKNMSGPMKRQVAVKSTRGFALKSTHGIAIKSTNMASVEKGESAPIRKNTRQFY
DGEESCYIIDAKLEGNLGRYLNHSCSPNLFVQNVFVDTHDLRFPWVAFFASKRIRAGTEL
TWDYNYEVGSVEGKELLCCCGAIECRXXXXXRASSLEDSLPPNLLNLPELPFPQELGLPD
Y
NT seq 3966 nt NT seq  +upstreamnt  +downstreamnt
atgtcctccctccctgggtgcattggtttggcagctgcaacagcagcagtggagtctgaa
gaaattgcagagctgcaacagtccgtggttgaggagctgggcatctcaatggaggagctt
cgacagttcattgatgaagaactggaaaagatggactgtgtacagcagcgcaagaagcaa
ctagcagagttggagacttgggtaatacaaaaggaatctgaggtggcccatgttgaccaa
ctctttgatgatgcatccagggcagtgactaactgtgagtctttggtgaaggacttttat
tccaaactgggactacagtaccgggacagcagctctgaagatgaagcttcccagcctaca
gaaataattgagattcctgatgaagacgacgatgtcctcagtattgattcaggtgatgct
gggaacagaactccaaaagaccagaagctccgtgaagctatggctgccttaagaaaatcg
gctcaagatgtccagaagttcatggatgctgtcaacaagaagagtaattcccaggatcta
cacaaaggaaccttgagtcagatgcctggagaattgagcaaagatggtgacttggtcgtc
agcatgcgcatccttggcaaaaaaagaactaagacgtggcacaaaggcacccttattgcc
atccagacagttgggtcagggaagaagtacaaggtgaaatttgacaacaaaggaaagagt
cttctgtcaggaaaccacattgcctacgattaccaccctcctgctgacaagttgtatgtg
ggcagtcgagtagtggccaaatacaaagatgggaatcaggtctggctctatgctggcatt
gtagctgagacaccaaacgtcaaaaacaagctcaggtttctcattttctttgatgatggc
tatgcttcctatgtgacgcagtctgaactgtatcccatttgccggccactgaaaaagact
tgggaggacatagaagacatctcctgccgagacttcatagaagagtatatcaccgcttac
cccaaccgccccatggtgttgctcaagagtggccagctgatcaagaccgagtgggaaggc
acgtggtggaagtcccgagtcgaggaggtggacggcagcctagtcaggatcctctttctg
gatgacaaaagatgtgaatggatctatcgaggctctacgcgactggagcccatgttcagc
atgaagacatcatccgcctctgcactagagaagaagcaagggggacagctcagaacacgt
ccaaatatgggtgctgtgagaagcaaaggtcctgtggtccagtacactcaggatctaaca
agtactggaacccagttcaagcctatggaacccccacagccgacagccccacctgcccca
cctgccccacctggtccagctctgtccccccaggcaggtgacagtgaaagcttggaaggc
cagcttgcccaatctcggaagcaggtagccaaaaaaagcacatctttccggccaggatct
gtgggctctggtcattcctcccctacatcccctgcactcagtgaaaatgcccctggtggg
aaacctgggatcaatcagacatataggtcacctttaggctccacaacctctgccccagca
cccccagctcccccagcacccccagccttccatggcatgctggagcgggcccctgcagag
ccctcctaccgtgcccccatggagaagcttttctacttacctcatgtctgcagctatact
tgtctgtctcgagtcagacctatgagaagtgagcagtatcggggcaagaaccctctgtta
gtcccactactctatgactttcggcgaatgacagcccggcgccgagtaaaccgcaagatg
ggctttcatgttatctataagacaccctgtggcctctgccttcggacaatgcaggagatt
gagcgttacctttttgagactggctgtgacttcctcttcctggagatgttctgtttggat
ccatatgttcttgtggaccgaaagtttcagccctataagcctttttactatattttggac
atcacctatgggaaggaagacgttcctctatcctgcgttaacgagattgacacaactccc
ccacctcaggtggcctacagcaaggaacggatcccgggcaagggtgttttcattaacaca
ggccctgaatttcttgtcggctgtgactgcaaagatgggtgccgggacaagtccaagtgt
gcctgccatcagctaactatccaggctacagcctgcaccccaggaggccaaatcaacccc
aactctggctaccaatacaagagactagaagaatgtctgcccacaggagtttatgagtgt
aacaaacgctgcaaatgtgaccctaacatgtgcacaaaccggttggtacagcatggcctg
caggttcgtctgcagctcttcaagacccagaacaagggctggggtatccgttgcttggat
gacattgccaaaggctcctttgtctgtatttatgcagggaagatcctgacagatgacttt
gctgacaaggagggcctagaaatgggtgatgagtactttgccaatctggaccatattgag
agcgtggagaacttcaaggaggggtatgagagtgatgccccctgctcctctgacagcagt
ggtgtagacttgaaggaccaggaagacggcaacagtggtacagaggaccctgaggagtcc
aatgacgacagctcagatgacaacttctgtaaggacgaggacttcagcaccagctcggtg
tggcgcagctatgctacccgacggcagacccggggccagaaggagaatggattgtctgag
atgtcttccaaggactctcgccccccagacctagggcccccacatattcctgtccctcca
tcaatccctgtaggtggctgcaatccaccttcctctgaagagacacctaagaacaaagtg
gcctcgtggttgagctgcaacagtgtcagtgaaggtggctttgctgactctgatagccgt
tcatccttcaagactagtgaaggtggggaatgccgcactgggggaggcagaggggaagct
gagaaggcttccacctcagggcttggcttcaaggatgagggagacatcaagcaggccaag
aaagaggaccctgatgaccgaaacaggatgtcagtagttactgaaagctctcgaaattat
ggttacaatccttctcctgtgaagcctgaaggacttcgccgcccaccaagtaaaactagt
atgcatcagagccgacgactcatggcctctgctcagccaaaccctgatgatatcctgacc
ctgtccagcagcacagaaagtgagggggaaagtgggaccagccggaagcccactgctggc
cagacttcagccgcagccgtggacagtgatgatatccagaccatctcctctggctctgaa
ggggatgactttgaggacaagaagaacatgtctggtccaatgaagcgccaagtggcagta
aaatccacccggggttttgctttgaaatcaacccatggcattgccattaaatcaaccaac
atggcatctgtggaaaagggggagagtgcacccattcgtaagaacacacgccagttctat
gatggggaggagtcttgctacatcatcgatgccaagcttgaaggcaacctgggccgctac
ctcaatcacagttgcagccctaacctgtttgtccagaatgtcttcgtggatactcatgat
ctccgcttcccgtgggtggccttcttcgccagcaagagaatccgggctggcaccgagctt
acctgggactacaactatgaggtgggcagcgtggaaggcaaggagttgctttgctgctgc
ggggccatcgaatgccgnnnnnnnnnnnnnncgagggcgtcttctttagaggacagcctt
cctcctaaccttctgaaccttcctgaactgccctttcctcaggaactgggtcttcctgac
tattga

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