Bipolaris oryzae: COCMIDRAFT_34845
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Entry
COCMIDRAFT_34845 CDS
T03125
Name
(RefSeq) hypothetical protein
KO
K14015
nuclear protein localization protein 4
Organism
bor
Bipolaris oryzae
Pathway
bor04141
Protein processing in endoplasmic reticulum
Brite
KEGG Orthology (KO) [BR:
bor00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04141 Protein processing in endoplasmic reticulum
COCMIDRAFT_34845
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
bor03009
]
COCMIDRAFT_34845
Ribosome biogenesis [BR:
bor03009
]
Eukaryotic type
Pre-60S particles
Ribosome quality control proteins
COCMIDRAFT_34845
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
NPL4
zf-NPL4
AAA
Rep_fac_C
DNA_pol3_delta2
Rad17
AAA_22
RuvB_N
AAA_11
AAA_assoc_2
AAA_16
AAA_19
SLFN-g3_helicase
AAA_28
DUF815
AAA_7
Mg_chelatase
AAA_24
AAA_5
UN_NPL4
AAA_18
bpMoxR
DNA_pol3_delta
Motif
Other DBs
NCBI-GeneID:
19122653
NCBI-ProteinID:
XP_007685840
JGI:
Cocmi1_34845
UniProt:
W6Z7A8
LinkDB
All DBs
Position
Unknown
AA seq
1070 aa
AA seq
DB search
MILRFVSKEGQFRLTVQPEDTFPDILPQIAEKLPKNIDLQSLSVSNRPQGGDERKFVDLK
GVSFKQVNLSNGAQLFLSFEEQSTPSNGHAAIASGGARLNGKPVQPSETASVPLDAPTQI
IKNPWEVVRQSPLDDRLDRQDGKIPRKRDARMCTHGHKGMCDYCMPLEPYSPEYLAEKKI
KHLSFHSYLRKVNSAKNRPELGSSYIPPLTEPYYRVKPDCPSGHKPFPEGICTKCMPSAI
SLKPQEYRMVDHVEFASIQVVDDLINFWRQTGCQRLGFLYGRYEEYTEVPLGTKAVVETI
YEPPQINEVDGISLGDWDNEQVIDDIAAQCGLQRVGVIFTDLLDADKGDGSVICKRHIDS
YYLSSLEVCFAARYQAKYPRPSKWSDTGRHGSNFVTCVISGDDQGQIGISSYQVSNDAVE
MVRADIIEPSAEPKVMLVQSEEDNEALNRTRYIPEVFYRKINEHGANVQEIAKPDFPVEY
LLLTLTHGFPTQPNPLFTGGKFPIENREAMGEMPEITHLSKALNAKANGLALNTASGLKA
ISNFHMLCFIHNLGILSKDEESLLFKVASTHDTSEGSALQHTPGWATLLTILKESGERPP
KRSYQSPSPSQSARRGAAAPLPLEHQRTMRQSSYGSDSDSVQLAKRVKGPPQVTMADFFN
IKARQQAAAQASSSKAPTTKQEPNRLQPWVEKYRPKTLSEVTAQDNTIQVLSRTMQSSNL
PHMLFYGPPGTGKTSTILALAKELYGPELMKSRVLELNASDERGISIVRQKVKDFARQQL
SVAPTYNVMVEDKSGTGEEGMVRYRDKYPCPPFKIIVLDEADSMTQDAQSALRRTMETYS
RMTRFCLVCNYVTRIIDPLASRCSKFRFKSLDQGNAVKRVSDIAALENVKLDDGVAEELV
RVADGDLRKAITFLQSAARLVGAIQSQGGGSKKGKKRTAVPEDDEMDIDSGNTATPSVSL
PTIAEIAGVLPPETLSTFTSALFPKSSAQKSIRYNEIAKVVENMVAEGWSAAQTVGQLYE
QIMFDERVEDVKKVRLAAVFSETDKRLVDGSDEHLAVLDLGVRVAGVLCL
NT seq
3213 nt
NT seq
+upstream
nt +downstream
nt
atgatactcaggttcgttagcaaagagggtcagttcagattgacagtacagcccgaagac
acttttccagacattcttccccaaatcgccgagaagctccccaagaacatcgatctccag
agcctcagtgtcagtaaccgtccgcaaggtggcgatgagaggaaattcgtagatctcaaa
ggtgtgagctttaagcaagtgaacctgtcgaacggcgcacaactcttcctctcctttgaa
gagcaatctacgccatcgaatggccatgctgcaattgcctctggcggcgcgcgactgaat
ggcaaacccgtccagccctccgaaaccgcctctgtgcccctcgatgcccccacccaaatt
ataaagaacccatgggaagtggtcagacaatctccgcttgacgatcggctcgacaggcaa
gatggcaagattccccgcaaacgcgacgcccgcatgtgcacccacggacataagggcatg
tgcgactactgtatgccgctggagccctactcacccgagtaccttgccgaaaagaagatc
aagcatctttctttccactcgtacctgcgcaaggtcaactcggcaaagaacagaccagag
ctcggaagttcttacatcccacctctgaccgaaccctactaccgcgtaaaacccgactgt
ccatcggggcacaagccgttcccagagggtatctgcacaaagtgcatgcccagcgccatc
tcacttaaaccgcaagaatatcgcatggtggaccacgtcgaatttgcatctatacaggtt
gtcgacgatttgatcaacttctggaggcaaactggttgtcagcgactgggtttcttatac
ggcagatatgaggagtacactgaggtgccactaggaacaaaggctgtggttgagaccatc
tacgagccaccacaaatcaatgaagtagacggcatatcgttgggtgactgggataacgag
caggtcattgacgacatcgccgcgcagtgcgggctgcaacgagtcggtgtcatctttact
gatcttctcgacgccgacaagggtgatggctccgtcatctgcaagcgacacatagattcc
tattatctgtcttcacttgaggtttgctttgcggcacggtatcaggcaaagtatcctcgg
ccatcaaaatggagcgataccggccggcacggatctaactttgtaacatgtgttattagc
ggtgatgaccaaggtcagattggcatctcatcttatcaggtatcaaacgacgctgtcgag
atggtacgcgccgacatcatcgagccttcagcggaacccaaggtcatgcttgtccagtca
gaagaagacaacgaggcgctcaaccgcacgcgatatatccccgaagttttctaccgaaag
atcaacgaacacggcgcaaacgtacaagaaattgctaaacctgactttccagttgagtat
ctgcttcttacacttactcatggtttccctactcagccaaaccctctctttactggcggc
aagtttccaattgaaaaccgcgaagccatgggcgaaatgcccgagattacgcatcttagc
aaggctctcaatgccaaggcaaatggcctcgctctcaatactgccagtggcctgaaggcg
atttcgaactttcacatgctctgcttcatccacaacctgggaatcttatcaaaggacgaa
gaatcgcttctgttcaaggttgcgtcaacgcacgatacctcagaaggctcagcactccag
cacacgccaggctgggcaactcttctaaccattctcaaagaaagtggtgagcgccccccg
aaacgttcctatcagtctccgtctccctctcaatcagccaggaggggggctgcagcacct
cttcccctggagcaccagcgtacaatgcgacagtcctcctatggctcagattccgattca
gtacaattggctaagcgggtcaaggggccaccacaagtcacaatggccgatttcttcaac
atcaaggcccggcaacaggccgctgcgcaggcgagttcgtcaaaagcccctacaacaaag
caagagccaaatcgcttgcaaccatgggtagagaaataccgacccaagacgctgtccgaa
gtcacagcccaggacaatactatccaagtcctctcccgcacaatgcagtcctccaactta
ccccacatgctcttctacggccccccaggaacaggaaaaacctcgactatcctcgccctt
gccaaagaactctacggacctgaactcatgaagtcgcgtgtactggaactgaacgcatcc
gacgagcgcggtatcagtatcgtacggcaaaaagtcaaagactttgcccgccaacaactt
agcgtagcaccaacatacaacgtcatggtagaagacaagagcgggacaggagaagagggt
atggtacgataccgagacaagtacccgtgcccacccttcaaaatcatcgttctcgacgag
gcagacagcatgacgcaagacgcacaatccgcgctccgccgcacaatggagacatacagc
cgcatgacgcgcttctgcctcgtctgcaactacgtcacccgcattatcgaccctctcgcc
tcccgctgctccaaattccgcttcaaaagcctcgaccagggcaacgccgtcaagcgcgtt
agcgacatcgcagcgctcgagaatgtgaagttggacgacggtgtagcagaggaattggtg
cgtgtagcagacggcgatttacgaaaggcaattacgttcttacagtctgctgcgcggctt
gtcggcgctatacaatctcaaggcggcggcagcaaaaaaggaaagaaacgtactgcggtc
ccagaggatgacgagatggatattgattccggtaacacagcgacaccgtctgtatccctc
cccaccatcgccgaaatcgcaggcgtcttaccacctgaaactctctctactttcacatct
gcactcttccccaagtcctcggcacaaaagtcgatacggtataatgaaattgccaaggta
gtcgagaatatggtggcggaggggtggagcgcagcgcagacggtggggcagctgtacgag
cagattatgtttgatgagcgggtggaggatgtgaagaaggtgcggcttgcggcagtgttt
agtgagacggacaagaggctagtggatggtagtgatgagcaccttgctgtgcttgatctg
ggggttagggttgcaggagtgttatgtttgtga
DBGET
integrated database retrieval system
