Bipolaris oryzae: COCMIDRAFT_41005
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Entry
COCMIDRAFT_41005 CDS
T03125
Name
(RefSeq) hypothetical protein
KO
K10981
DNA polymerase IV [EC:
2.7.7.7
]
Organism
bor
Bipolaris oryzae
Pathway
bor03450
Non-homologous end-joining
Brite
KEGG Orthology (KO) [BR:
bor00001
]
09120 Genetic Information Processing
09124 Replication and repair
03450 Non-homologous end-joining
COCMIDRAFT_41005
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
bor03400
]
COCMIDRAFT_41005
Enzymes [BR:
bor01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
COCMIDRAFT_41005
DNA repair and recombination proteins [BR:
bor03400
]
Eukaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
X-family DNA polymerases
COCMIDRAFT_41005
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DNA_pol_B_palm
DNA_pol_lambd_f
DNA_pol_B_thumb
HHH_8
NTP_transf_2
MG3
Motif
Other DBs
NCBI-GeneID:
19123983
NCBI-ProteinID:
XP_007692772
JGI:
Cocmi1_41005
UniProt:
W6YYW4
LinkDB
All DBs
Position
Unknown
AA seq
706 aa
AA seq
DB search
MDRHVQAARAESLSQTLGTPITDLDFSKLPPIAILQTRLSQDEEKSLKETLRLYNASLTT
DMSRAKILLGKVGTKGRAAFELRSRNLIAEEFVMPKRRASTAKTGTPHKKQRVFESPYEP
ISASQEDYPAKKEAEETSDTEDEAPIQNSSFSQSPLLYAEDEVPFPTIVENGSSIDIVWV
VNLNWIEACRTAGHLVPLGDNLIYQGKVQQRPKPRSTKSIKDIFSVTPKEPPAAQTLKPT
GTRQSQNILGRAKLDAPTMTGKTTHKSPQFGNQASRRFGDKHLAPSQPSTHSFASQTALL
LQQTTSEYEGEDSDIPPPPEWVKQGVKYACQRLTPANGPNEDFLDLLKKIRTNRILVEDE
IGVRAYSTIIAAIAAYPYKLSHPREIAQLPGCDEKTAVLFVEWKNTGKIKEVEDYENDEA
MKVLRSFCDIWGVGAKTARHFYYDNHWTELDDIIEHGWNDLDRVQQIGVKYYAEFQEPIP
RPEVEHIAAVVRDHAVKLRDERISVTIVGGYRRGKSVSGDVDIIVSHPELESTAELVQEI
VESLEDAQWITHTLTLSLANTKRGQHTLPFRSAKGAGVGFDTLDKALVVWQDPAWPTREE
DLERNPRAKNPAIRRRVDIIVAPWRTVGCAVMGWSGGTTFQRDLRRYAKYVKGWKFDSSG
IRSRANGEAIMIEGPDGIEGTPEDAEKAVFKGLGLEYIPPEYRVTY
NT seq
2121 nt
NT seq
+upstream
nt +downstream
nt
atggaccgccatgttcaggcggcgcgcgcggagtcgttatctcagacattgggaacacct
ataacagaccttgattttagtaaacttccgccgatagctatactgcaaacacgcttgagc
caggatgaagaaaaatcgctcaaagaaactttgcgcctgtacaatgcgtcgcttaccacg
gacatgtcgagggcaaaaatactcctaggtaaggtgggcactaagggaagagctgcattt
gagttgcgctcgaggaacctaatcgccgaagaatttgtaatgccgaaacgccgtgctagt
actgcaaaaacagggacacctcacaagaaacaaagagtcttcgagtcgccatatgaacct
atctcagctagtcaagaagattatcctgcgaagaaagaagccgaagaaacgtccgacact
gaagacgaagcgccgatccagaattcgagtttttcacagtctccgctgttgtatgctgag
gatgaagtgccctttccaacgatcgtcgagaatggctcaagcattgacattgtttgggtt
gtcaacttgaactggatagaggcttgtagaactgcagggcacctcgttcctctaggtgac
aacttgatatatcaggggaaagtgcagcaacgaccaaaaccacgcagtaccaaatccatc
aaggatatcttttcagtaactccaaaagaaccacctgcagctcagacactcaagcccacg
gggacacgtcagtcacaaaacatattaggtcgagcaaagttggatgcacctacaatgaca
ggcaagactacacacaagtctccccaatttggtaatcaagcgtctcggcgcttcggtgac
aagcatttagcgccctcgcagccttcgacccactcctttgcttcacagacggcgcttctg
cttcagcaaacgacgagcgagtatgaaggcgaagatagtgatataccgccaccacccgag
tgggtgaagcaaggcgtcaagtatgcatgccaacgcttgacacccgctaacgggccgaat
gaggatttcctagacctactcaagaagattaggactaatcggatccttgtcgaagatgag
ataggtgtacgtgcgtactcaaccattattgcagccattgctgcttatccgtacaagctc
agtcacccacgtgagattgcgcaattaccagggtgtgacgagaagactgcagttcttttc
gttgaatggaagaataccggaaaaattaaggaagttgaggattatgagaacgatgaggca
atgaaggttctgcgttcattctgtgatatatggggtgttggagcaaagacggcacgacat
ttctattacgacaaccactggacggagttggacgatatcattgaacatggctggaatgac
cttgaccgagtgcagcagattggcgtgaaatactatgccgagttccaagaaccgattcca
cgtcccgaagtcgaacacatagccgctgttgttcgagaccatgcggtaaaactccgggac
gaacgcatcagtgtcaccatagtcggtggctatagacgcggcaaatcagtttctggcgat
gtggatataatcgtatcgcaccctgaattggaaagtacggcggaattagttcaggaaatt
gtcgaatcattggaagatgctcagtggatcacacacaccttgacattgagcttggcaaac
acgaagcgcggacaacacaccctaccttttcgttctgcaaaaggagctggagtaggattc
gatactcttgataaagcacttgtagtgtggcaggatccggcttggccaactcgcgaagag
gacctcgagcgaaatccgcgagcgaagaacccagctattcgtcggcgggtcgacatcatc
gttgcaccttggcgaactgtgggctgtgcagtaatgggctggagcggtggcacgacattt
cagcgggatttgcggcggtatgcaaaatatgtgaagggctggaagttcgacagcagcggc
attcgcagtcgagctaatggtgaggccatcatgattgaagggccagacggtattgaaggg
actcctgaagatgcagaaaaggccgtgttcaaagggctaggcctggaatatatcccaccc
gagtatagagtcacatattga
DBGET
integrated database retrieval system