Bipolaris oryzae: COCMIDRAFT_7439
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Entry
COCMIDRAFT_7439 CDS
T03125
Name
(RefSeq) hypothetical protein
KO
K08736
DNA mismatch repair protein MSH3
Organism
bor
Bipolaris oryzae
Pathway
bor03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
bor00001
]
09120 Genetic Information Processing
09124 Replication and repair
03430 Mismatch repair
COCMIDRAFT_7439
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
bor03400
]
COCMIDRAFT_7439
DNA repair and recombination proteins [BR:
bor03400
]
Eukaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
Mismatch and loop recognition factors
COCMIDRAFT_7439
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
MutS_V
MutS_III
MutS_I
MutS_IV
MutS_II
DUF4911
Motif
Other DBs
NCBI-GeneID:
19125288
NCBI-ProteinID:
XP_007690385
JGI:
Cocmi1_7439
UniProt:
W6YZS9
LinkDB
All DBs
Position
Unknown
AA seq
1142 aa
AA seq
DB search
MAPKSSQSSQKSTQPTISSFFTRKPAQPPKAAATTSAAPAATPASPPRTKSPPATNGTTQ
KDDSDDDEEDGLPIRAPLTLRKRAVHDDDQPQDSGRSSPSKRVRFTKNASPQQSPTHTSV
TTSGTSKPPRITDRTSKFLFSSSPAIQDENKPDDDDEDEEDAAAAQKQKEKLHEKFVKKL
GRPDSFAELRRRNKIISEDNANEEEGEGDEDDEEEPPPKPVKGKKAVATKKASKLTPMEI
QYLDIKRKHLDTVIIMEVGYKYKFFGEDARIASKELGIVCIPGKFRYDEHPSEAHLDKFA
SASFPTHRLQVHVKRLVQANHKVGVVRQVETAALKAAGNNRNAPFVRKLTNLYTKGTYVD
DVEGLETPTEGSGASAQSTGYLLCITESNAKGWGTDEKVQVGLVAVQPATGDIIYDDFED
SFMRSEIETRLLHIAPAEFLVVGDLSKATNKLIEHLSASKTNVFGDRSRVERVEKPKTMA
AQAYSHISNFYAGKMKSSADADSEKQGAVLDKVHQLSEHVTICLSAMITYLTEYGLEHVF
DLTKYFQPFSARSYMLLNGNTLSSLEIYQNQTDFTSKGSLFWTMNRTKTRFGQRLLRKWV
GRPLIDKAKLEERIAAVEELKEGEHTIPVDKLRFVLGKIKTDLEKVLIRIYYKKCTRPEL
LSALQALQEISSQYLSAQTPEQSGFSSTLLSEAVSNVPKIYEDLNGFLDKINASAAKDDD
KYSFFREEHEAEDINDLKLSIASVEDDLNTHRKEAAAKLGKSKVDYVTVAGIEYLIEVKR
KSAEEKKVPASWQQISATKTTLRFHTPEVKRMLQERDQYKESLAAACDRAYMRLLEEISS
KYQQLRDCIASLATLDALLSLATLANQPGYVKPTFTDDIQINITGGRHPMVEQLLLDSYV
PNDLSLSHDSTRALLVTGPNMGGKSSFVRSAALITIMGQIGSYVPASEARLGMLDAVFTR
MGAFDNMLKGESTFMVELNETSDILKSATPRSLVILDELGRGTSTFDGVAIAEAVLDYVI
RDLQSLTLFITHYQHLAKVPSRFPDGQLKNVHMRFEEQNGGREVVFLYEATEGISHRSYG
LNVARLARVPDKVIDVAEVKSAELEQSMEVHKLANLSRMMKGLLSDDSEAMLDKFVEGIE
QL
NT seq
3429 nt
NT seq
+upstream
nt +downstream
nt
atggcgccgaaaagcagtcaatcgtcccagaagagtacccagccgacaatatcgagcttc
ttcacgcgcaagccggcgcaaccccccaaagctgctgctaccacttctgccgctcccgct
gccactcccgcatctccaccaagaacaaagtctccgcccgccaccaacggcacgacccag
aaagacgatagtgacgatgacgaagaagatggtcttccaataagggcgcctcttactctc
cgtaagcgcgcagtacatgacgatgatcaaccacaagactcaggtcggtcctcgccttcc
aaacgcgttcgcttcaccaaaaatgcctctccgcaacaatcacctacgcacacatccgtc
actacctcgggtacatcgaaaccccccagaattaccgacagaacctccaagtttctgttc
tcctcatcaccagcgattcaagatgagaacaaaccagacgacgacgatgaggatgaggaa
gatgccgctgctgcccagaagcaaaaggagaagctacacgagaagtttgtgaagaagctg
ggtcggcctgatagctttgctgagctgcgaaggcggaacaagatcatttcagaggataat
gccaatgaggaagagggcgaaggcgacgaagatgacgaagaagagcccccgccaaagcct
gtcaagggcaaaaaagccgtcgccacaaaaaaggccagcaagttgacgcctatggaaatc
caatatctcgatatcaagcgcaagcacctcgacactgtcatcattatggaggttggatac
aagtacaagttctttggtgaagacgcaagaatcgcatcgaaggagctaggaatcgtttgc
ataccaggaaaatttcgctacgacgagcacccttctgaggcgcacttggacaaatttgcg
tctgcgagttttcccacccatcgcctgcaagtccatgtcaaacgtcttgtacaggcaaac
cacaaagtgggtgtggtgcgccaggtcgaaacagcagcgctcaaggcggctggcaacaac
agaaacgcaccatttgttcgaaaactcacaaacctttacaccaaaggcacatatgtagat
gacgtggaaggcctggaaacaccaaccgagggttcaggtgctagtgcacagtcgactgga
tatctgctttgcatcaccgagagcaatgccaagggttggggtacagacgagaaggtccag
gtcggactggtagctgtacaaccggcaacaggcgatatcatctacgatgactttgaggac
agcttcatgcgtagcgagatcgagacgcgcctgctccatattgcgccagctgaatttctg
gtggttggtgatctgtccaaagctaccaataagctgatagaacacctctcagccagcaag
accaatgtatttggagacaggtcacgagtggagagggtggagaagcccaaaacaatggct
gcacaagcctacagtcacatctcgaacttctatgcaggtaaaatgaaatccagtgcagac
gctgattcagaaaagcaaggtgcggtcctagacaaggtgcatcaactatcagagcacgtt
actatatgtctatctgccatgattacatacctcaccgagtacgggctggaacatgtcttc
gatcttaccaagtattttcagcccttcagcgcacgatcatacatgctgctcaacggaaac
acattgtccagtctggagatttaccaaaaccagacagacttcacttcaaaaggcagtctg
ttctggaccatgaatcggacaaagactcgcttcggacaacggctgctcaggaaatgggtt
ggtcgaccactgattgataaagccaagttggaagagcgcattgcggctgttgaagagctc
aaggaaggcgaacacaccatacccgtggataaattgaggtttgtgttgggaaagatcaag
actgatcttgagaaagtcctcatccggatatactacaagaaatgcacgagacctgaactc
ctatcagctttgcaggcgcttcaagaaatatcaagccaatacttatctgctcagacacct
gagcaaagcggcttctcgtcaacactactgagtgaagctgtctcaaatgttccaaagata
tatgaggacttgaatggcttccttgacaagatcaacgcgagtgccgccaaagatgacgat
aagtactcattcttccgagaggagcatgaagcggaggacatcaacgatctgaagctcagc
attgcgtcggtagaagatgacctcaacacacaccgcaaagaggcagcagcaaagcttggg
aagagcaaggtggactacgtcaccgttgcgggtattgagtacctgattgaagtcaagagg
aaatcagccgaggagaagaaagtccctgcatcatggcagcaaatctccgctaccaagact
actcttcgcttccacactccagaagtcaagcgtatgctccaagagcgggatcagtacaaa
gagtcacttgccgccgcgtgtgatagagcctacatgcgtctactggaggagatctcatcc
aagtaccagcaactgcgagattgcatagcttctttagctacgcttgacgctcttctgtct
ctcgctaccctagcaaatcagccaggctacgtaaagcccactttcacagacgatattcaa
atcaacatcaccggcggtcgacatccaatggttgagcagctacttctcgatagctacgtg
ccaaatgatctctcattatcgcacgactcgactcgtgcccttctcgtaacaggtcctaac
atgggcggaaaatcctctttcgtacgctctgccgctctgatcaccatcatgggacaaatc
gggtcctacgttccagccagcgaggcacgtctaggaatgctagacgcagtgtttactcgc
atgggcgcattcgacaacatgcttaaaggcgagtcgacattcatggtcgaacttaacgaa
acatccgatatcctcaaatccgcaaccccgcgctcactcgttatcctcgacgagcttggt
cgcggcacttcgaccttcgacggtgttgccatagccgaagcagtgctcgactacgtcatt
cgtgacttgcagtctctgacgctattcatcacgcactaccagcaccttgccaaggtgccg
tcgcgatttcctgatggccagttgaagaatgtgcacatgcggtttgaagaacagaatggt
ggaagggaagtggtgtttttgtacgaagcaacagaaggtattagtcatcggtcatacgga
ctcaatgtcgctcggttggcgagagtgcccgataaggttattgatgtggcggaggtgaag
agcgcagagttggagcagagcatggaggttcacaagctggcaaatctatcgcgcatgatg
aaaggtctgttgagtgatgattcggaagcaatgcttgacaagtttgttgagggaatcgag
cagttgtaa
DBGET
integrated database retrieval system