KEGG   Bipolaris oryzae: COCMIDRAFT_8859
Entry
COCMIDRAFT_8859   CDS       T03125                                 
Name
(RefSeq) hypothetical protein
  KO
K07936  GTP-binding nuclear protein Ran
Organism
bor  Bipolaris oryzae
Pathway
bor03008  Ribosome biogenesis in eukaryotes
bor03013  Nucleocytoplasmic transport
bor03250  Viral life cycle - HIV-1
Brite
KEGG Orthology (KO) [BR:bor00001]
 09120 Genetic Information Processing
  09122 Translation
   03013 Nucleocytoplasmic transport
    COCMIDRAFT_8859
   03008 Ribosome biogenesis in eukaryotes
    COCMIDRAFT_8859
  09125 Information processing in viruses
   03250 Viral life cycle - HIV-1
    COCMIDRAFT_8859
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:bor03019]
    COCMIDRAFT_8859
   03009 Ribosome biogenesis [BR:bor03009]
    COCMIDRAFT_8859
   03016 Transfer RNA biogenesis [BR:bor03016]
    COCMIDRAFT_8859
   03036 Chromosome and associated proteins [BR:bor03036]
    COCMIDRAFT_8859
  09183 Protein families: signaling and cellular processes
   04147 Exosome [BR:bor04147]
    COCMIDRAFT_8859
   04031 GTP-binding proteins [BR:bor04031]
    COCMIDRAFT_8859
Messenger RNA biogenesis [BR:bor03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   Transport factors
    Ran-mediated transport factors
     COCMIDRAFT_8859
Ribosome biogenesis [BR:bor03009]
 Eukaryotic type
  Pre-40S particles
   Export and cytoplasmic maturation factors
    COCMIDRAFT_8859
  Pre-60S particles
    COCMIDRAFT_8859
Transfer RNA biogenesis [BR:bor03016]
 Eukaryotic type
  tRNA transport factors
   tRNA export factors
    COCMIDRAFT_8859
Chromosome and associated proteins [BR:bor03036]
 Eukaryotic type
  Centrosome formation proteins
   Centrosome duplication proteins
    Regulators of centriole replication
     COCMIDRAFT_8859
   Spindle formation proteins
    COCMIDRAFT_8859
Exosome [BR:bor04147]
 Exosomal proteins
  Exosomal proteins of haemopoietic cells  (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
   COCMIDRAFT_8859
GTP-binding proteins [BR:bor04031]
 Small (monomeric) G-proteins
  Ran Family
   Ran
    COCMIDRAFT_8859
SSDB
Motif
Pfam: Ras Roc Arf MMR_HSR1 G-alpha Gtr1_RagA RNA_helicase Pox_A32 ArgoMid AAA_16 AAA_7 AAA_24 TsaE AAA_33
Other DBs
NCBI-GeneID: 19127309
NCBI-ProteinID: XP_007692049
JGI: Cocmi1_8859
UniProt: W6YV61
LinkDB
Position
Unknown
AA seq 219 aa
MAETAAQPSCPTFKLVLVGDGGTGKTTFVKRHLTGEFEKKYIATLGVEVHPLAFTTNLGP
IQFDVWDTAGQEKFGGLRDGYYINGQCGIIMFDVTSRITYKNVPNWHRDLVRVCENIPIV
LTGNKVDVKERKVKAKSITFHRKKNLQYYDISAKSNYNFEKPFLWLARKLVGNQSLDFVA
APALAPPEVTVDQAVLEQYRQEMENAAQMPLPDEDDADL
NT seq 660 nt   +upstreamnt  +downstreamnt
atggccgagactgccgcccaacccagctgcccgaccttcaagctcgtgcttgtcggtgac
ggtggtactggaaagactaccttcgtcaagcgccatttgaccggagagttcgagaagaag
tacattgcgacgctcggtgtcgaagtccacccactcgctttcaccaccaaccttggcccc
atccagttcgatgtctgggacactgcaggccaggagaagtttggtggtctccgtgacgga
tactacatcaacggccaatgcggtatcatcatgtttgatgtgacctcgcgtatcacatac
aagaacgtccccaactggcaccgtgacttggtccgtgtctgcgagaacattccaattgtc
ctcaccggcaacaaggtcgacgtcaaggagcgcaaggtcaaggcaaagtccatcaccttc
caccgaaagaagaacctccagtactacgacatctcggccaagtccaactacaacttcgag
aagcctttcctctggctcgccaggaaactggtcggcaaccagtctctggactttgtcgcc
gctcccgctcttgcgccccccgaggttaccgtcgaccaggctgttctcgagcagtaccga
caggagatggagaacgccgctcagatgcctctgcccgatgaggatgatgccgacttgtag

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