Bipolaris oryzae: COCMIDRAFT_8859
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Entry
COCMIDRAFT_8859 CDS
T03125
Name
(RefSeq) hypothetical protein
KO
K07936
GTP-binding nuclear protein Ran
Organism
bor
Bipolaris oryzae
Pathway
bor03008
Ribosome biogenesis in eukaryotes
bor03013
Nucleocytoplasmic transport
bor03250
Viral life cycle - HIV-1
Brite
KEGG Orthology (KO) [BR:
bor00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
COCMIDRAFT_8859
03008 Ribosome biogenesis in eukaryotes
COCMIDRAFT_8859
09125 Information processing in viruses
03250 Viral life cycle - HIV-1
COCMIDRAFT_8859
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
bor03019
]
COCMIDRAFT_8859
03009 Ribosome biogenesis [BR:
bor03009
]
COCMIDRAFT_8859
03016 Transfer RNA biogenesis [BR:
bor03016
]
COCMIDRAFT_8859
03036 Chromosome and associated proteins [BR:
bor03036
]
COCMIDRAFT_8859
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
bor04147
]
COCMIDRAFT_8859
04031 GTP-binding proteins [BR:
bor04031
]
COCMIDRAFT_8859
Messenger RNA biogenesis [BR:
bor03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Ran-mediated transport factors
COCMIDRAFT_8859
Ribosome biogenesis [BR:
bor03009
]
Eukaryotic type
Pre-40S particles
Export and cytoplasmic maturation factors
COCMIDRAFT_8859
Pre-60S particles
COCMIDRAFT_8859
Transfer RNA biogenesis [BR:
bor03016
]
Eukaryotic type
tRNA transport factors
tRNA export factors
COCMIDRAFT_8859
Chromosome and associated proteins [BR:
bor03036
]
Eukaryotic type
Centrosome formation proteins
Centrosome duplication proteins
Regulators of centriole replication
COCMIDRAFT_8859
Spindle formation proteins
COCMIDRAFT_8859
Exosome [BR:
bor04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
COCMIDRAFT_8859
GTP-binding proteins [BR:
bor04031
]
Small (monomeric) G-proteins
Ran Family
Ran
COCMIDRAFT_8859
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Ras
Roc
Arf
MMR_HSR1
G-alpha
Gtr1_RagA
RNA_helicase
Pox_A32
ArgoMid
AAA_16
AAA_7
AAA_24
TsaE
AAA_33
Motif
Other DBs
NCBI-GeneID:
19127309
NCBI-ProteinID:
XP_007692049
JGI:
Cocmi1_8859
UniProt:
W6YV61
LinkDB
All DBs
Position
Unknown
AA seq
219 aa
AA seq
DB search
MAETAAQPSCPTFKLVLVGDGGTGKTTFVKRHLTGEFEKKYIATLGVEVHPLAFTTNLGP
IQFDVWDTAGQEKFGGLRDGYYINGQCGIIMFDVTSRITYKNVPNWHRDLVRVCENIPIV
LTGNKVDVKERKVKAKSITFHRKKNLQYYDISAKSNYNFEKPFLWLARKLVGNQSLDFVA
APALAPPEVTVDQAVLEQYRQEMENAAQMPLPDEDDADL
NT seq
660 nt
NT seq
+upstream
nt +downstream
nt
atggccgagactgccgcccaacccagctgcccgaccttcaagctcgtgcttgtcggtgac
ggtggtactggaaagactaccttcgtcaagcgccatttgaccggagagttcgagaagaag
tacattgcgacgctcggtgtcgaagtccacccactcgctttcaccaccaaccttggcccc
atccagttcgatgtctgggacactgcaggccaggagaagtttggtggtctccgtgacgga
tactacatcaacggccaatgcggtatcatcatgtttgatgtgacctcgcgtatcacatac
aagaacgtccccaactggcaccgtgacttggtccgtgtctgcgagaacattccaattgtc
ctcaccggcaacaaggtcgacgtcaaggagcgcaaggtcaaggcaaagtccatcaccttc
caccgaaagaagaacctccagtactacgacatctcggccaagtccaactacaacttcgag
aagcctttcctctggctcgccaggaaactggtcggcaaccagtctctggactttgtcgcc
gctcccgctcttgcgccccccgaggttaccgtcgaccaggctgttctcgagcagtaccga
caggagatggagaacgccgctcagatgcctctgcccgatgaggatgatgccgacttgtag
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integrated database retrieval system