KEGG   Bordetella parapertussis Bpp5: BN117_0077
Entry
BN117_0077        CDS       T02297                                 
Symbol
ssb
Name
(RefSeq) single-strand binding protein
  KO
K03111  single-strand DNA-binding protein
Organism
bpar  Bordetella parapertussis Bpp5
Pathway
bpar03030  DNA replication
bpar03430  Mismatch repair
bpar03440  Homologous recombination
Brite
KEGG Orthology (KO) [BR:bpar00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03030 DNA replication
    BN117_0077 (ssb)
   03430 Mismatch repair
    BN117_0077 (ssb)
   03440 Homologous recombination
    BN117_0077 (ssb)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:bpar03032]
    BN117_0077 (ssb)
   03400 DNA repair and recombination proteins [BR:bpar03400]
    BN117_0077 (ssb)
   03029 Mitochondrial biogenesis [BR:bpar03029]
    BN117_0077 (ssb)
DNA replication proteins [BR:bpar03032]
 Prokaryotic type
  DNA Replication Initiation Factors
   Initiation factors (bacterial)
    BN117_0077 (ssb)
DNA repair and recombination proteins [BR:bpar03400]
 Prokaryotic type
  SSBR (single strand breaks repair)
   MMR (mismatch excision repair)
    Other MMR factors
     BN117_0077 (ssb)
  TLS (translesion DNA synthesis) factors
   Other SOS response factors
    BN117_0077 (ssb)
Mitochondrial biogenesis [BR:bpar03029]
 Mitochondrial DNA transcription, translation, and replication factors
  Mitochondrial DNA replication factors
   Other Mitochondrial DNA replication factors
    BN117_0077 (ssb)
SSDB
Motif
Pfam: SSB tRNA_anti-codon
Other DBs
NCBI-GeneID: 13888113
NCBI-ProteinID: YP_006894172
UniProt: K0MA94
LinkDB
Position
74114..74677
AA seq 187 aa
MRSRRRDVPRGGAGGQQRGIGMASVNKVILVGNLGRDPEVRYSPDGAAICNVSIATTSQW
KDKASGERREETEWHRVVMYNRLAEIAGEYLKKGRSVYIEGRLKTRKWQDKDTGADRYST
EIVADQMQMLGGRDSGGDSGGGYGGGYDDAPRQQRAPVQRPAAAPQRPAPQAAPAANLAD
MDDDIPF
NT seq 564 nt   +upstreamnt  +downstreamnt
atgcgcagccggcgccgcgacgttccacgcggcggcgcgggcgggcaacagaggggcatc
ggcatggcatccgtcaacaaagtcattctcgtcggcaatctgggtcgcgacccggaagtg
cgttacagcccggatggggcggccatctgcaacgtgtcgatcgccacgacctcgcaatgg
aaggacaaggccagcggcgagcgccgcgaggaaaccgaatggcaccgcgtggtcatgtac
aaccgcctggccgaaatcgcgggcgaatacctgaagaaggggcgttcggtctacatcgag
ggccgcctgaagacccgcaaatggcaagacaaggacaccggcgccgaccgctacagcacc
gaaatcgtggccgaccagatgcagatgctgggcgggcgcgatagcggcggcgacagcggc
ggcggttacggcggtggctacgacgacgcaccgcgccagcagcgcgccccggtccagcgc
ccggcggccgccccgcagcgccccgcgccgcaggccgcgccggccgccaacctggccgac
atggacgacgatattccgttctga

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