Bordetella parapertussis Bpp5: BN117_0934
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Entry
BN117_0934 CDS
T02297
Symbol
ddlB
Name
(RefSeq) D-alanine--D-alanine ligase
KO
K01921
D-alanine-D-alanine ligase [EC:
6.3.2.4
]
Organism
bpar
Bordetella parapertussis Bpp5
Pathway
bpar00470
D-Amino acid metabolism
bpar00550
Peptidoglycan biosynthesis
bpar01100
Metabolic pathways
bpar01502
Vancomycin resistance
Brite
KEGG Orthology (KO) [BR:
bpar00001
]
09100 Metabolism
09106 Metabolism of other amino acids
00470 D-Amino acid metabolism
BN117_0934 (ddlB)
09107 Glycan biosynthesis and metabolism
00550 Peptidoglycan biosynthesis
BN117_0934 (ddlB)
09160 Human Diseases
09175 Drug resistance: antimicrobial
01502 Vancomycin resistance
BN117_0934 (ddlB)
09180 Brite Hierarchies
09181 Protein families: metabolism
01011 Peptidoglycan biosynthesis and degradation proteins [BR:
bpar01011
]
BN117_0934 (ddlB)
Enzymes [BR:
bpar01000
]
6. Ligases
6.3 Forming carbon-nitrogen bonds
6.3.2 Acid-D-amino-acid ligases (peptide synthases)
6.3.2.4 D-alanine---D-alanine ligase
BN117_0934 (ddlB)
Peptidoglycan biosynthesis and degradation proteins [BR:
bpar01011
]
Precursor biosynthesis
Amino acid ligase
BN117_0934 (ddlB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Dala_Dala_lig_C
Dala_Dala_lig_N
ATP-grasp_3
ATP-grasp
ATPgrasp_ST
TTL
ATPgrasp_YheCD
ATP-grasp_4
Motif
Other DBs
NCBI-GeneID:
13888970
NCBI-ProteinID:
YP_006894943
UniProt:
K0ME19
LinkDB
All DBs
Position
1023109..1024071
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AA seq
320 aa
AA seq
DB search
MSKQFGKVGVLYGGRSAEREVSLMSGKGVHEALLSAGVDAHLFDTGERSLADLAAAGFER
VFIALHGRYGEDGTLQGALELLGIPYTGSGPLASSLSMDKIMTKRVWLQHGLPTPAFEVL
GGSTELRLVPDRLGLPLILKPPHEGSTVGITKVAGYSDMKAAYELAARFDAEVLAEQFIT
GRELTVAVLGSGAAARALPVIEIVAPGGNYDYEHKYFSDDTQYFCPADLPADLPADVAAD
VAAVAERAYAALGCEGWGRVDFILDRENRPWLLEMNTSPGMTGHSLVPMAARAVGMSYAD
LCVAILAEAACKVRSPARQD
NT seq
963 nt
NT seq
+upstream
nt +downstream
nt
atgagcaagcaattcggcaaagtcggcgtgttgtacggcggccgttcggccgagcgggaa
gtgtcgctgatgtccggcaagggcgtgcacgaagccctgctgagcgccggcgtggacgcg
cacctgttcgacaccggcgagcgcagcctggcggacctcgccgcggcgggtttcgagcgc
gtgttcatcgccctgcatggccgctatggcgaggacggcacgctgcagggagcgctggag
ctgttgggcattccttacaccggcagcgggccgctggcttcaagcctgtcgatggacaag
atcatgaccaagcgggtgtggctgcagcacggcttgcccacgccggccttcgaggtgctg
ggcggcagcaccgaactgcgcctggtgcccgaccgcctgggcctgccgctgatactcaag
ccgccgcacgagggctcgaccgtcggcatcaccaaggtggcgggctattcggacatgaag
gcggcgtacgagctggctgcgcgtttcgacgccgaggtgctggccgaacagttcatcacg
ggccgcgaactgaccgtcgccgtgctgggctcgggcgccgcggcgcgcgccttgccggtg
atcgagatcgtcgcgcctggcggcaattacgactacgaacacaagtacttctcggacgac
acgcagtacttctgcccggccgacctgcccgcggacctgcccgcggacgtggccgcggac
gtggccgccgtcgccgagcgcgcctacgccgcgctaggttgcgagggttggggccgggtc
gacttcatcctggaccgggagaaccggccctggctgctggaaatgaatacttcgcccggc
atgaccggccattcactggtgccgatggcggcgcgcgcggtgggcatgagctatgccgac
ctgtgcgtggccatcctggccgaggccgcgtgcaaagtgcgcagcccggcgcgacaagat
tga
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