Bordetella parapertussis Bpp5: BN117_3996 Help Entry BN117_3996        CDS       T02297                                  Name (RefSeq) hypothetical protein   KO K01147   exoribonuclease II [EC:3.1.13.1] Organism bpar  Bordetella parapertussis Bpp5 Brite KEGG Orthology (KO) [BR:bpar00001]  09180 Brite Hierarchies   09182 Protein families: genetic information processing    03016 Transfer RNA biogenesis [BR:bpar03016]     BN117_3996 Enzymes [BR:bpar01000]  3. Hydrolases   3.1  Acting on ester bonds    3.1.13  Exoribonucleases producing 5'-phosphomonoesters     3.1.13.1  exoribonuclease II      BN117_3996 Transfer RNA biogenesis [BR:bpar03016]  Prokaryotic type   3'processing and CCA adding factors    3'processing factors     BN117_3996 BRITE hierarchy SSDB OrthologParalogGene clusterGFIT Motif Pfam:  RNB Motif Other DBs NCBI-GeneID:  13892033 NCBI-ProteinID:  YP_006897742 UniProt:  K0MIN4 LinkDB All DBs Position 4295277..4297160 Genome browser AA seq 627 aa AA seqDB search MYVFYDDDGGFKAGNILSETDASLQVESETGKRSKIKRASTLFTFAAPEPAALMAQAATL AEDIDLQFLWECAPQEEFDAPALAAEYFGHAPGPVEQAALLMRLHGAPAYFHRRGKGRYR PAPPDILAAALAALEKKRLQAEQQQQWIDEMAQGRLPEAIAQAAESLLVRPDKNSMQWKA FDAACTQLQKTPERLLLDLGAWPHPLALHKRRFLAVNFPRGVGFPAMDVPSIERELPLAE GEIYSVDDITTTEIDDALSVSALPDGKIRVGIHVAAPGLAITRGSEHDKLARTRLSTVYM PGEKIPMQPDNVIQAFSLDAGRPVPAVSLYVTADPRTGAIEASETRLERIVVRENLRHND LDAQISEAALADPDAPLAYGHWLRPLWQLAQALGAQREAVRGKPENNTRVEYSFYLDGSP DDPDTPVRLVPRQRNAPLDRMVAEYMILANNIWGGLLNQHGVPGIYRSQQAGRVRMSTQA LPHEAIGVPQYAWSTSPLRRYVDLVNQWQLIAAVEHGVSARLVAPFKPRDADLYAIIGAF DAQYAAWADFQNAMERYWCMRWLKQQGISRTTAHVLREDLVRLANAPLVTRVGGLPELER GAAVQIDIMNMDELALELDCRYLGPAD NT seq 1884 nt NT seq  +upstreamnt  +downstreamnt atgtacgtgttttacgacgacgacggcggcttcaaggccggcaatatcctgtccgagacc gacgccagcctgcaggttgagtcggaaacgggcaagcgcagcaagatcaagcgcgccagc accctgttcaccttcgcggcgccggagccggccgcgctgatggcccaggcggccacgctg gccgaggacatcgacctgcagttcctctgggagtgcgcgccgcaggaggaattcgacgcg cccgcgctggcggccgagtacttcggccacgcccccggcccggtcgagcaggccgccctg ctgatgcgcctgcacggcgcgccggcctatttccatcgccgcggcaagggccgctaccgc ccggccccgcccgacatcctggccgccgccctggccgcgctcgagaaaaagcgcctgcag gccgaacagcagcagcagtggatcgacgaaatggcccagggccgcctgcccgaggccatc gcccaggcggccgaatcgctgctggtgcgtccggacaagaattcgatgcagtggaaggcg ttcgacgccgcctgcacccagctgcagaagacgcccgagcgcctgctgctggacctgggc gcctggccgcatccgctggcgctgcacaagcggcgcttcctggccgtgaacttccccagg ggcgtgggatttccggccatggacgtgccgtcgatcgaacgcgaactgccgctggccgag ggcgagatctactcggtcgacgacatcaccaccaccgagatcgacgacgcgctgtcggtc agcgccctacccgacggcaagatccgcgtcggcatccacgtcgccgcgcccggactggcc attacgcgcggcagcgaacacgacaagctggcgcgcacccgcctgtccacggtctacatg ccgggcgagaagattccgatgcagcccgacaatgtgatccaggcgttttcgctggacgcg ggccggccggtaccggccgtgtcgctgtatgtcacggccgacccgcgcaccggcgcgatc gaagcctcggaaacccgcctggaacgcatcgtggtgcgcgagaacctgcgccacaacgac ctggacgcgcagatttccgaagccgcgctggccgatccggacgcccccctggcttatggc cactggctgcggccgctgtggcagctggcgcaggcgctgggcgcgcagcgcgaagccgtg cgcggcaagcccgaaaacaatacgcgggtcgaatacagcttctacctggacggcagcccg gacgacccggataccccggtgcggctggtgccgcgccagcgcaacgcgccgctggaccgc atggtggccgagtacatgatcctggccaacaacatctggggcggcctgctgaaccagcac ggcgtgccgggcatctaccgctcgcagcaggccggccgggtgcgcatgagcacgcaggcg ctgccgcacgaagcgatcggcgtgccgcaatatgcctggagcacctcgccgctgcgccgc tatgtcgacctggtcaaccagtggcaattgatcgcggccgtcgagcacggcgtgtcggcg cgcctggtggcgcccttcaagccgcgcgacgccgacctctatgccatcatcggcgcgttc gacgcgcagtatgcggcctgggctgatttccagaatgccatggagcgctattggtgcatg cgctggctcaagcagcagggaatcagccgcacgaccgcccacgtgctgcgcgaggacctg gtgcgcctggccaacgcgccgctggtcacgcgcgtgggcggcctgcccgagctggaacgc ggcgcggcggtgcagatcgacatcatgaatatggacgaactggcgctggagctggactgc cgctacctggggccggcggactga

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