Boleophthalmus pectinirostris (great blue-spotted mudskipper): 110163547
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Entry
110163547 CDS
T05002
Symbol
dhx36
Name
(RefSeq) ATP-dependent RNA helicase DHX36
KO
K14442
ATP-dependent RNA helicase DHX36 [EC:
5.6.2.6
]
Organism
bpec
Boleophthalmus pectinirostris (great blue-spotted mudskipper)
Pathway
bpec03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
bpec00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
110163547 (dhx36)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
bpec03019
]
110163547 (dhx36)
Enzymes [BR:
bpec01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.6 RNA 3'-5' helicase
110163547 (dhx36)
Messenger RNA biogenesis [BR:
bpec03019
]
Eukaryotic type
mRNA degradation factors
3'-5' decay
Other 3'-5' decay factors
110163547 (dhx36)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
OB_NTP_bind
DEAD
HA2_C
Helicase_C
HA2_N
nSTAND3
AAA_22
ATPase
AAA_19
T2SSE
AAA_16
Motif
Other DBs
NCBI-GeneID:
110163547
NCBI-ProteinID:
XP_020784178
LinkDB
All DBs
Position
Unknown
AA seq
1060 aa
AA seq
DB search
MSYGYGGGGRRGRRGGGRGYRDGSRERWDRGGGSAARGHSSDQDQERGGRGGGQRDRPPP
HLKGREIGLWYARYGAVRRKQADRRSRAVVQMDEAREQHITRLLDSVQSDQPEPERLNRA
STSDSSHFSGQSGHCYFDGEMPEEKKHSFLKHRKSDEDDECLEDQKTQAQSQCSFKVKDE
PPDAWDEEEVQKTDTERWTDKDAEFLLQEIAKDSSLDIFLKQDLQTKRSDPKYKEMLNFR
EKLPAFSKKEELVDLINSHHVLVVSGETGCGKTTQVTQFILDDLIDQGVGSTCRVVCTQP
RRISAISVAERVAAERAESVGNGNSCGYQIRLQSRLPRRQGSILYCTTGIILQWLRSDPL
LSTISHLVLDEIHERNLQSDVLLVIVKNLLTIRHDLKVILMSATLNAEKFSKYFGNCPMI
HIPGLTFPVEEFLLEDVLEMTRYQPRNQDRRSSWKRGFWQGRNCPPEKKEKEAEYRESWP
CYARTLQGRYADSTIESLEKLDNDDKIDLELILALIRHIVNKDEEGAILVFLPGWDNIST
LHDLLMAQQMFRSDCFIIIPLHSLMPTVNQTQVFKKPPPGVRKIVIATNIAETRYDLDDV
VYVIDGGKIKETNFDTENNISTMAAEWVSLANAKQRKGRAGRVQPGKCYHLYNGLRASLL
DAYQLPEIMRTPLEELCLQIKILKLGSIARFLQKSLDPPSEKAVTLAIKNLTDLNALDHS
ENLTALGIHLARLPVEPHIGKLILFGALLGCLDPILTIAASLSFKDPFFIPLGKEKMADM
RRKTLSRNSKSDHLTIVNAFKGWEEAKRRGARYEREFCWDNFLSANTLQMLHNMKGQFAE
HLMHAGFVSSKDPKDPKSNVNSGNDKLIKAVIVAGLYPKVAKIRPCHSKKRPMVKVYTHA
DGKVCIHPKSVNAEETEFNYHWLIYHLKMRTSSIFLYDCTEVSPFSLLFFGGDITIQKDG
DQETIAVDEWIIFRSPARIAHLVKSLKKELDSLLEEKIRNPAPVDWQNRQSKDCAVITAI
IDLITTQDNPTGGTGFYSRAEESGPRGQHLYFNDDDDDDD
NT seq
3183 nt
NT seq
+upstream
nt +downstream
nt
atgagttatgggtatggtggaggtgggagaagaggcaggagaggtggaggacgcggctac
agagacggcagcagagaaagatgggaccgtggaggtgggagcgcagccagaggacacagc
tccgaccaggaccaggagcgagggggcagaggaggtggtcaacgggaccgtccaccccct
cacctgaagggcagggagatcggcctgtggtacgccagatacggagctgtgaggaggaaa
caggctgaccgcagatcgcgggcagtggtccagatggatgaggccagggagcagcacatc
actagactgcttgactctgtccaaagtgatcagcctgaaccagaaagactcaacagagct
tctacctcagacagcagccacttctctggtcagtctggacactgctactttgatggtgaa
atgcctgaggaaaagaaacactcttttttaaaacacagaaaatccgatgaagatgatgag
tgtcttgaagatcaaaaaacacaagcgcagtctcagtgttcctttaaggttaaggatgag
cctcccgatgcttgggatgaagaggaagtgcagaaaacagatactgagagatggactgac
aaagatgcagagtttttacttcaggaaatagccaaagacagctctttggacattttttta
aaacaagatcttcaaaccaagcgatcagatccaaagtacaaagaaatgctgaattttaga
gaaaagctcccagcattcagtaaaaaagaggagcttgtagatctaatcaactctcaccat
gttctggtggtgagtggtgagactggctgtggaaagaccactcaggtcacacagttcatc
ctggatgatcttattgaccaaggcgtgggctcaacctgcagagtggtgtgcactcagcct
aggcgaatcagtgccatttctgtggctgaacgtgtagcagctgagagggcagaaagtgtt
ggaaatgggaattcttgtggctatcaaatccgtcttcagagccggttgccacggagacaa
ggctctatcctgtactgtacaacaggcattattcttcagtggctccgctcagacccctta
ttgtcaactataagtcaccttgtattggacgagattcatgaaagaaaccttcagtcggat
gttttattagtcattgtcaagaaccttctcacaatcagacatgatctaaaagtaattctc
atgagcgcaactttaaatgctgaaaagttctcaaaatattttggtaattgcccaatgata
catattcctggtttgactttccctgttgaagaatttttacttgaagacgttttggagatg
actcgatatcaaccacgtaatcaggatcgtcgttcctcttggaagcggggcttttggcaa
ggacgtaactgtccaccagagaaaaaggagaaagaggctgaatatagagagagctggcct
tgttacgcacgtaccttacagggcagatacgctgacagcaccattgaatctctagagaaa
ctggacaatgatgacaagattgacttggagctgatcctggccttgatacgtcacattgta
aacaaagatgaagaaggagcgattttagtttttcttcctgggtgggataatatcagcact
ctacatgacctgctgatggcccagcagatgtttcgatcagattgtttcattatcatccct
ctacactcccttatgcccaccgtcaatcagacgcaggtctttaagaagcctcctcctggt
gtcagaaagattgtcatagccaccaatattgctgaaacaaggtatgatcttgatgatgtt
gtctatgtgatagatggaggcaaaattaaggagaccaactttgacactgaaaacaacatt
agcacaatggccgccgagtgggtcagtctggcaaatgccaaacaacgaaaaggtcgtgct
ggaagagtgcaaccaggaaagtgctatcatctgtacaatggtctccgggccagccttctg
gatgcctatcagctacctgaaatcatgaggacgcctcttgaggagctctgcctgcagatc
aagatattgaagcttggttccattgccagatttctacagaaatccctagaccctccatct
gaaaaagctgtgactcttgctatcaagaaccttacggacctgaatgccctggaccattct
gaaaacctgacagcactgggcatccatctggctcgtcttcctgttgagccacacattggc
aaactcattctgtttggagctttgctgggctgcctcgaccccatactcaccatcgctgca
tcccttagtttcaaagaccctttctttatccctttgggcaaagagaaaatggcagacatg
agaagaaagaccctgtccagaaactctaaaagtgatcatctcactattgtcaatgccttt
aagggctgggaagaagccaagcggcgaggtgcaaggtatgagcgggagttctgctgggat
aattttctctctgccaatacgcttcagatgcttcacaatatgaagggtcagtttgcagag
cacctaatgcatgctgggtttgtaagcagcaaagatcctaaagatcccaaatccaatgtc
aattcaggcaatgataagttaatcaaagcagtgattgttgctggtctctacccaaaagtg
gcaaagattagaccttgtcacagcaagaaaagacctatggttaaagtgtacacgcatgca
gatgggaaagtttgcatccacccaaagtctgtgaatgctgaggagacagaattcaactac
cactggctcatttatcacctgaagatgaggaccagcagtattttcctgtatgactgtacc
gaggtgtctcccttctcactcctgttttttggaggtgacattacaatacaaaaggatgga
gaccaagaaaccattgctgttgatgagtggattatttttagatcaccagcacgcatcgct
catcttgtcaagagtctgaagaaagaactggactcactattggaggagaaaatccgtaat
cctgctccagtagactggcaaaatcgtcagtctaaagactgtgctgtcatcactgccatt
atagacctgatcacgacccaggacaatcccacaggaggcacggggttttacagcagagcg
gaggagtctggccccagaggacaacacctttacttcaatgatgatgatgacgatgatgac
tag
DBGET
integrated database retrieval system
