KEGG   Boleophthalmus pectinirostris (great blue-spotted mudskipper): 110165995Help
Entry
110165995         CDS       T05002                                 

Gene name
lig4
Definition
(RefSeq) DNA ligase 4
  KO
K10777  DNA ligase 4 [EC:6.5.1.1]
Organism
bpec  Boleophthalmus pectinirostris (great blue-spotted mudskipper)
Pathway
bpec03450  Non-homologous end-joining
Brite
KEGG Orthology (KO) [BR:bpec00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03450 Non-homologous end-joining
    110165995 (lig4)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:bpec03400]
    110165995 (lig4)
Enzymes [BR:bpec01000]
 6. Ligases
  6.5  Forming phosphoric-ester bonds
   6.5.1  Ligases that form phosphoric-ester bonds (only sub-subclass identified to date)
    6.5.1.1  DNA ligase (ATP)
     110165995 (lig4)
DNA repair and recombination proteins [BR:bpec03400]
 Eukaryotic Type
  DSBR (double strand breaks repair)
   NHEJ (non-homologous end-joining)
    DNA Ligase 4 complex
     110165995 (lig4)
BRITE hierarchy
SSDB OrthologParalogGFIT
Motif
Pfam: DNA_ligase_A_M DNA_ligase_A_N DNA_ligase_A_C BRCT_2 DNA_ligase_IV BRCT RNA_ligase mRNA_cap_enzyme
Motif
Other DBs
NCBI-GeneID: 110165995
NCBI-ProteinID: XP_020786852
LinkDB All DBs
Position
Unknown
AA seq 921 aa AA seqDB search
MEGSSNNVASTSSSSSSSSSSSASPSVAAQVPFLHLCNTLERIQKAKTRPEKSKILGDFM
ETWRKFHSVLHKENPKTTDSFYPAMRLIVPAFERERMAYGIKENMLAKLYIDVLGLPKNG
PEANKLLNYRAPTSTQGEAGDFAGMAFFVLKKRCTGDGKLTIKEVNDFLDSVAINNANKK
KDLVRQSLLHLITQSSALEQKWLIRMIIKDMKISISKETVLQVFHSDAPELYNVNTDLKK
VCLQLHDPAVSLSEVSIGLFSAFKPMLAAVANLRNIEKQMSNSPFYIETKLDGERIQLHK
DGDVYKYFSRNAFEYTQQFGGSPLEGSLTPYIHNVFKSDVVNCILDGEMMAYNPTAETFM
QKGSKFDIKKLMEDSELQTCFCVFDVLLVNDRKLGKETLKKRYEILQTVFTPVKGRIHIV
PKTEVKSTKEVINALNDAIDGREEGIMVKDPMSIYKPDKRGEGWLKIKPEYVDGLMDELD
LLIVGGYWGKGRRGGMMSHFLCAVAEAPKPGETKPSVFHTLCRIGSGYTMKELYDLGLKL
AKHWKVYKKNDPPASILCATEKPEVYIEPCNSVIIQVKAAEIVSSDMYKTNCTLRFPRIE
KIRDDKEWHQCTTLAELDQFRSKASGKLASRHLSLEDGAPQKKKRKVPVKPKKVVGVVEH
FKPQDLSGVQKETDMFEDVEFCVINGTEEHDKAALERGVASCGGIVVQNPGPDTYCVLVG
AENMRVKNLVASNKHDVVRAAWLLECLERKEMVPWQPRHMISMTPSTREYFAKKYDRYGD
SYDVDTDAEQLREVFDRITSVDVEVEAARVEQRYGWEDLPTSMFRPFAAYMDRFEDIGES
RVPRAGSVLDVRALEFELHGGRVERRLEEGVTHVVVQDEGSVLELRTLRRTFRRKFKIVR
DSWVTDSISAGFVLDDHDYLV
NT seq 2766 nt NT seq  +upstreamnt  +downstreamnt
atggagggttcgtccaataacgtcgcatctacctcctcctcttcctcctcgtcttcctct
tcttcggcctcgccctctgtcgccgctcaggtcccgttccttcacctctgcaacactttg
gagcgaatccaaaaggccaaaacgcgcccggaaaaatccaaaatcctgggagacttcatg
gaaacctggcgaaagttccactcggttttacacaaagaaaatcccaaaaccacagactcg
ttttacccggcaatgcgtcttatcgtgccggcgttcgaacgggagcgcatggcgtacggc
atcaaggaaaacatgctcgcgaaactgtacatcgacgtcctggggctgccgaaaaacggg
cctgaagcgaataaacttttaaattaccgcgcgccgacttctacgcaaggagaggccggc
gatttcgctggaatggccttctttgttttgaaaaagcgctgcactggtgatggcaaactt
accataaaagaagtcaacgattttctagattctgtggcgattaacaacgcaaacaagaag
aaggacttggtcaggcaaagtttgctgcatctcatcacgcagagttcggcgttggagcaa
aaatggttgatccgaatgattataaaagacatgaagattagtatcagtaaagaaacggtg
ctgcaggttttccactcggacgcgccagagctttacaacgtcaacacggacttgaagaaa
gtttgtctgcagctccacgaccccgcagtgtcgctgagtgaagtctcgatcggattattc
tccgcgttcaaaccgatgctcgccgccgtcgccaacctccgcaacatcgaaaagcaaatg
agcaacagccctttttacatcgagaccaaactcgacggcgagcgcatccagctgcacaaa
gacggcgacgtttacaagtacttcagccgcaacgccttcgagtacacgcagcagttcggg
ggctcgccgctcgagggctccctcacgccgtacatccacaacgttttcaaaagcgacgtc
gtgaactgcattttggacggggagatgatggcgtacaacccgaccgccgagacgttcatg
caaaagggaagcaagttcgacatcaagaagttaatggaggactccgagctgcagacgtgc
ttttgcgtgttcgacgttttgctggtgaacgatcggaaactggggaaggagacgttgaaa
aagcgatacgagattctgcagaccgtcttcacgccggttaaagggcgcattcacatcgtg
cccaaaaccgaagtgaaaagcaccaaagaggttataaacgctttgaacgacgcgatagac
ggacgcgaggaagggatcatggtcaaagatccgatgtccatctacaaaccagataaacgc
ggcgagggctggctcaaaatcaaacccgagtacgtcgacggtttgatggacgagctcgac
ttgcttatagtcggcggttattggggaaaaggcagacggggcggaatgatgtcgcacttt
ctctgcgctgtagccgaagcaccaaaaccgggagaaacgaaaccttcagttttccacacg
ctttgccgaatcggatcgggctacaccatgaaagagctttacgatctgggtttgaaactg
gcaaaacactggaaagtttacaagaaaaacgatccgccggcgtccattctgtgcgcgacg
gaaaagccggaggtttacatcgaaccgtgcaactccgtgatcatccaagtcaaagcggca
gagatcgtgagcagcgacatgtacaagacgaactgcacgctgcgctttccccggatcgag
aaaatccgagacgacaaagagtggcaccagtgcacgacgctggccgagctggatcagttc
cggagcaaagcgtcggggaagctggcgtcgcggcacctgagcctggaggacggagcgcca
cagaagaagaagaggaaggtcccggtgaagcccaagaaggtggtgggggtcgtggagcac
ttcaaaccacaggacctgagcggcgtccagaaggagacggacatgttcgaggacgtggag
ttctgcgtcatcaacggcacagaggagcatgacaaagcggcgctggagcggggcgtggcc
agttgcggcggtatcgtggtgcagaatccgggtccggacacgtactgcgtcctggtcggc
gccgagaacatgcgcgtgaagaacctcgtcgcctccaacaaacacgacgtggtgcgggcg
gcgtggctcctcgagtgcctggagcggaaggagatggtgccgtggcagccgcgtcacatg
atcagcatgacgccctccacccgggagtacttcgccaaaaagtacgaccggtacggcgac
agctacgacgtggacacggacgcggagcagctgcgggaggtgttcgacaggatcacgtcg
gtggatgtggaggtggaggcggcgcgggtggagcagcggtacggctgggaggacctgccc
acgagcatgttccgacccttcgccgcgtacatggatcgtttcgaggacatcggggagtcg
cgcgtgccgagggcggggagcgtgctggacgttcgggcgctggagttcgagctccacggg
gggcgggtggagcggcggctggaggagggggtgactcacgtggtggtgcaggacgagggc
tcggttctggagctcaggactttgcgcagaaccttcaggaggaagttcaagatcgtgaga
gactcgtgggtcacggactcgatcagcgccgggtttgtgctcgacgatcacgactacctc
gtttaa

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