Boleophthalmus pectinirostris (great blue-spotted mudskipper): 110168483
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Entry
110168483 CDS
T05002
Name
(RefSeq) general transcription factor IIH subunit 2-like
KO
K03142
transcription initiation factor TFIIH subunit 2
Organism
bpec
Boleophthalmus pectinirostris (great blue-spotted mudskipper)
Pathway
bpec03022
Basal transcription factors
bpec03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
bpec00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
110168483
09124 Replication and repair
03420 Nucleotide excision repair
110168483
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
bpec03021
]
110168483
03400 DNA repair and recombination proteins [BR:
bpec03400
]
110168483
Transcription machinery [BR:
bpec03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIIH
110168483
DNA repair and recombination proteins [BR:
bpec03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TFIIH complex
110168483
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Ssl1
VWA_2
C1_4
VWA
IBR
DZR
Motif
Other DBs
NCBI-GeneID:
110168483
NCBI-ProteinID:
XP_020789579
LinkDB
All DBs
Position
Unknown
AA seq
408 aa
AA seq
DB search
MDEEPERTKRWEGGYERTWEVLKEDESGSLKASVEEILFQNKRKRVIENHGQVRLGMMRH
LFVVVDCSRSMEDQDLKPTRLTCTLKLLEKFVEEYFDQNPISQLGIITTKNKRAEKLTDL
SGNPSKHVFALRKAADGVCLGEPSLYNALNLAAATLRHMPGHTSREVLIVMSSLTTCDPS
NIYDLIKTLKSLRVRVSVVGLCAEVRVCSVLTRETGGRYHVILDEGHFKELLLMHVTPPP
SAAAADCSLIRMGFPQHTVVSLNDPDAKPSFSSAHLESSAGPGPGSGSGPGPGSGPGPGP
GLSLGGYFCPQCNAKYTELPVECKVCGLTLVSAPHLARSFHHLFPLEVFREKLLEEHQGQ
RFCEACQGELRDKSVFECPSCSSVFCVECDVFIHEALHCCPHCIHSTP
NT seq
1227 nt
NT seq
+upstream
nt +downstream
nt
atggacgaggagccggaacgaacgaaacgctgggagggcggctacgagaggacctgggag
gtgttgaaggaggatgagtctggttctctcaaagcttcagtggaagaaatcctgtttcag
aacaaacgcaaacgggtgatcgagaatcatggacaagtccgtctgggaatgatgcgtcac
ttgtttgtggtggtggactgttccaggagcatggaggaccaggacctcaaacccacaaga
ctcacctgcactctgaagcttctggaaaagtttgtggaggagtatttcgaccagaatcca
atcagccagttgggaatcatcacgaccaagaacaaacgggccgagaagctcacggacctg
tcaggaaacccgtccaaacacgtgtttgctctgaggaaggcggcggacggcgtctgtctg
ggagaaccatctctctacaacgccctgaacctcgccgccgccacactcaggcacatgcct
ggacacacgagcagagaggtcctgatcgtcatgagcagcttgaccacgtgtgacccgagc
aacatctacgacctcatcaagaccctgaagtccctgcgtgtgcgtgtgtctgtggtgggt
ctgtgtgccgaggtccgtgtgtgttcggttctgacccgtgagaccggaggtcggtaccac
gtgatcctggacgagggacacttcaaagaactgctcctgatgcacgtgactccgcccccg
agcgccgccgccgccgactgctcgctcatacgcatgggtttccctcagcacacagttgtg
tctctgaacgacccggacgccaaaccttcgttcagttcagctcacctggagagcagcgcc
ggtccaggtccgggttcgggttctggtccgggtcctggttccggtccgggtccaggtccg
ggtctctctctgggcgggtacttctgtcctcagtgtaacgccaaatacaccgagctcccg
gtcgagtgtaaagtctgtggtctcactctggtctccgctcctcatctggcccgttccttc
catcatctgtttcctctggaggtcttcagggagaagcttctggaggagcaccagggacag
aggttctgtgaggcgtgtcagggggagctccgggacaaaagcgttttcgagtgtccttcg
tgttcgtcggttttctgtgtggagtgtgacgtcttcatccacgaagctctgcactgctgc
ccccactgcatccacagcaccccctga
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