Bordetella pertussis B1917: B1917_0138
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Entry
B1917_0138 CDS
T03638
Symbol
rpoN
Name
(GenBank) RNA polymerase sigma-54 factor
KO
K03092
RNA polymerase sigma-54 factor
Organism
bpet
Bordetella pertussis B1917
Pathway
bpet02020
Two-component system
bpet02040
Flagellar assembly
Brite
KEGG Orthology (KO) [BR:
bpet00001
]
09130 Environmental Information Processing
09132 Signal transduction
02020 Two-component system
B1917_0138 (rpoN)
09140 Cellular Processes
09142 Cell motility
02040 Flagellar assembly
B1917_0138 (rpoN)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
bpet03021
]
B1917_0138 (rpoN)
Transcription machinery [BR:
bpet03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
B1917_0138 (rpoN)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma54_DBD
Sigma54_CBD
Sigma54_AID
Motif
Other DBs
NCBI-ProteinID:
AIW90722
LinkDB
All DBs
Position
131169..132590
Genome browser
AA seq
473 aa
AA seq
DB search
MTRPALELRPGQHLTLTPQLQQSIRLLQLSSLELEAELSQALAENPLLERDEDPAREEQA
DPEREASVEADEAPDTELRLDEMPGSGGVLPDDDSDLPQAARPDTLREHLLGQLALTRAA
PRDAALCGLLIDELDENGYLDSPLEEILTWLPAEVQADLDELRAALALLQSFDPAGIGAR
DMAECLQLQLRQPDPARLPEAADAEVLACARRICAQHLPLLATGNVARVREAVQCDEAVV
RAAHALIPRLEPRPGRAWTVPAADYAIPDVIVRRTRQGWQAVLNSAVVPRLHVNAVYAQV
LGGQRQGGNAGLQAQLQQARWMIRNVEQRFDTILRVAQAIVAHQQAFFTQGPAAMRPLIL
KDIAGELDLHESTISRATTQKYMLTPFGTLELKRFFGAGVSTDGGDATSATAVQAVIRQM
VADEDRAKPLSDSQIMQRLADQGIVIARRTVAKYREALRIAPATLRKAHAAGR
NT seq
1422 nt
NT seq
+upstream
nt +downstream
nt
atgactcgtcccgcgctagaacttcgtcctggtcaacatttgacgttgacccctcaactg
caacagtcgatccggctgttgcagctgtcgtcgctggagctggaggccgaactgtcgcag
gcgctggccgagaatccgttgctggaacgcgacgaagatccggcgcgcgaggagcaggcc
gaccccgagcgcgaggcctcggtcgaggccgacgaggcgccggataccgaactgcgcctg
gacgagatgcccggttcgggcggcgttcttcccgacgacgacagcgacctgccgcaggcg
gcgcgcccggataccctgcgcgaacacctgctggggcagctggcgctgacgcgcgccgcg
ccgcgcgatgcggcgctgtgcggtctgctgatcgacgaactggacgagaacggctacctg
gattcgcccctggaagagatcctgacctggctgccggccgaggtgcaggccgacctggac
gagctgcgcgcggcgctggcattgctgcagtcgttcgatccggcaggcatcggcgcgcgc
gacatggccgaatgcctgcagctgcagttgcgccagcccgatccggcgcgcctgcccgag
gcggccgatgccgaggtgctggcctgtgcgcggcgcatctgcgcgcagcatctgcccttg
ctggccaccggcaacgtggcccgcgtgcgcgaggccgtgcaatgcgacgaggcggtcgtg
cgcgccgcgcatgcgctgatcccgcgcctggaaccgcggccgggccgcgcctggacggtg
ccggcggccgattacgccattcccgacgtgatcgtgcgccgtacccgccagggctggcag
gcggtgctcaacagcgccgtcgtgccgcggctgcatgtcaatgccgtctatgcgcaagtg
ctgggcggccagcgccagggcggcaacgccggcctgcaggcgcagctgcaacaggcgcgc
tggatgatacgcaacgtggagcagcgcttcgacaccatcctgcgcgtggcgcaggcgatc
gtggcgcatcagcaggcgttcttcacccaggggccggcggccatgcggccgctgatcctc
aaggacatcgccggcgaactggatctgcacgaatcgaccatttcgcgcgcgacgacgcag
aagtacatgctcacaccgttcggtacgctggagctcaagcgcttctttggcgcgggcgtg
tccaccgatggcggagacgccacctcggccaccgcggtgcaggcggtgatccgccagatg
gtggccgacgaggatcgcgccaagcccttgtcggacagccagatcatgcagcgcctggcc
gaccagggcatcgtcattgcccgccgcacggtggccaagtaccgcgaggcgctgcggatt
gcgccagcgacgctgcgcaaggcccacgccgcgggtcgttag
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