Alkalihalophilus pseudofirmus: BpOF4_07970
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Entry
BpOF4_07970 CDS
T01165
Symbol
recF
Name
(GenBank) recombination protein F
KO
K03629
DNA replication and repair protein RecF
Organism
bpf
Alkalihalophilus pseudofirmus
Pathway
bpf03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
bpf00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
BpOF4_07970 (recF)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
bpf03400
]
BpOF4_07970 (recF)
DNA repair and recombination proteins [BR:
bpf03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecFOR pathway proteins
BpOF4_07970 (recF)
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Ortholog
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GFIT
Motif
Pfam:
SMC_N
AAA_15
AAA_23
DUF2813
AAA_21
AAA_27
DUF6753
Motif
Other DBs
NCBI-ProteinID:
ADC49652
UniProt:
D3FQI0
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Position
3971..5086
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AA seq
371 aa
AA seq
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MFIKSLLIRQFRNYERVELEFDERMNVFIGENAQGKTNTIEAIYVLALAKSHRTSKDKEL
IRWNDEFAKVQGQVQRQSGPIELDLVISTKGKKVKLNGLEQRKLSEYVGAVNVVMFAPED
LNLVKGSPQLRRRFIDMELGQISPVYLHHLGLYQKVLQQRNFLLKDLQIGKGSKDMLDIL
TDQLIELAVQITKRRFVFLGQLQKWAEEIHRDISRAKETLKIIYKPSCDVLEEMDMPKMK
EVFIETYENKKQREIARGVTLFGPHRDDLGFLVNEHDVQTYGSQGQQRTTALSVKLAEIE
LIHAEVGEYPILLLDDVLSELDDYRQTHLLHTIGQRVQTFVTTTSITGVHHEALDGASIF
KVEQGTISNDA
NT seq
1116 nt
NT seq
+upstream
nt +downstream
nt
atgtttattaagtcactccttattcgccaattcagaaattacgaacgggttgaacttgaa
tttgatgaaagaatgaatgtgtttatcggtgagaacgcgcaagggaaaacgaatacgata
gaggcaatctatgtattggcacttgctaagtcacaccggacctcaaaagacaaagagtta
atccgctggaatgatgagtttgctaaagtgcaaggtcaagtacagagacaatctggacca
attgagcttgacttagtgatttcaactaaagggaaaaaagttaaattaaatgggcttgaa
cagcggaagttaagtgaatacgtaggggccgttaatgtcgtcatgtttgcacctgaggat
ttaaacttagtgaaaggcagtccacagctgcgcagacggtttattgatatggaacttggg
cagatcagtccggtttatcttcatcacttaggactctaccaaaaagtcttgcaacagcga
aattttttgttaaaggatttacagattggcaaaggctctaaggatatgcttgatattctt
acggatcaattaattgagttagctgtgcagattacgaagcggcgctttgtctttttaggt
cagctgcaaaagtgggctgaagaaatccatcgcgatatcagccgggctaaagagacgctt
aaaattatatataaaccctcttgtgatgtattagaagagatggatatgccgaaaatgaaa
gaagtattcatagaaacatatgaaaataagaagcaaagagaaattgctcggggcgtaaca
ttatttggtccccacagagatgatcttggttttctagtaaatgagcatgatgttcagacc
tacggttcgcaagggcagcaaagaacaacagctctaagtgtgaaactcgctgagattgaa
ttaattcatgcggaagtaggagagtatcccattcttcttcttgatgatgtcctctcagag
ttagacgattacagacagactcatttactgcatacaataggccagcgtgtacagacattt
gtgacgacaacatcaataactggcgtccatcacgaagcgcttgatggagcttcgatattt
aaagtcgagcaaggaaccatttcaaacgacgcataa
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