Bathycoccus prasinos: Bathy12g03250
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Entry
Bathy12g03250 CDS
T03089
Name
(RefSeq) histidyl-tRNA synthetase
KO
K01892
histidyl-tRNA synthetase [EC:
6.1.1.21
]
Organism
bpg
Bathycoccus prasinos
Pathway
bpg00970
Aminoacyl-tRNA biosynthesis
Brite
KEGG Orthology (KO) [BR:
bpg00001
]
09120 Genetic Information Processing
09122 Translation
00970 Aminoacyl-tRNA biosynthesis
Bathy12g03250
09180 Brite Hierarchies
09181 Protein families: metabolism
01007 Amino acid related enzymes [BR:
bpg01007
]
Bathy12g03250
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
bpg03016
]
Bathy12g03250
Enzymes [BR:
bpg01000
]
6. Ligases
6.1 Forming carbon-oxygen bonds
6.1.1 Ligases forming aminoacyl-tRNA and related compounds
6.1.1.21 histidine---tRNA ligase
Bathy12g03250
Amino acid related enzymes [BR:
bpg01007
]
Aminoacyl-tRNA synthetase
Class II (A)
Bathy12g03250
Transfer RNA biogenesis [BR:
bpg03016
]
Eukaryotic type
Aminoacyl-tRNA synthetases (AARSs)
Other AARSs
Bathy12g03250
Prokaryotic type
Bathy12g03250
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
tRNA-synt_His
Glyco_transf_29
HGTP_anticodon
tRNA-synt_2b
Mpp10
tRNA-synt_2d
Motif
Other DBs
NCBI-GeneID:
19012567
NCBI-ProteinID:
XP_007509939
UniProt:
K8EM54
LinkDB
All DBs
Position
12:complement(join(593452..595091,595125..596736))
Genome browser
AA seq
1083 aa
AA seq
DB search
MSVRRRCYYHHHCVLLLVKLAFVLFLCAEDESNERRATLFVSGAKPSPRGKGGKGKGKDS
IGLEELKTKLSIAESAIAKVTQELVARGEDIGEKKKIMMKGDSEEEKEEEEEEKNNDNNK
KRVEYVSSWGSLNNHFQYVSDTYNDYFGNNNKKGGSGASLSSALFGGGGDRNRGNSDDNS
RVAGEGEEKSSSNNDDDDDDSGDKNNEGEISSSSCSPSCSKYHRCVDGKCRCPVLYSGPN
CTENGFERAIDTNVFEKEKVIKCAMGVNHDPFYSQYEEKYGEKADRKMRVAHILRSRFIA
TTKESAPDLPDLLPFNTCAVVGSNGNIENNKNYGKDIDTHDVVIRFNDAPTVGYESVVGA
KTTIRIQNSDFCAKGERGSKNFGNEVCVHYTASPPDKMCERDKSKGGKGGSSAGNGSCRL
VYPSHRDSKYIFWYWKLNKIKGVEDLSCAENQKLGKKCNMLKMSAGYYGIQLALNLCGKV
NLYGFGTSRETRETKHYFVKKSASWDRKGWAQRHHWSYERFCIDAFEDGLIDGLKVNPCS
IYSAQRAKRDFLSTNINTFSSFLSNRFFFKNLKKSSKHWIKETKMLSSVSSKFLFRTHHQ
WPNYYRRHHAQYVLKRTTLRALSSTAEGGGGNGGGRSVTTQTANVDAKKSNAQQQQQSQI
ELNPPKGTRDFPPEEMRKRNWLFDSFRQTALLFGFEEFDAPVLESEALFTRKAGEEIQGQ
LYNFSDKGDRRVSLRPELTPSLARLIMQKGKSLAVPAKWFAIGQCWRYERMTRGRRREHY
QWNMDIVGVEGVEAEVELLSAICHFFASVGITSEDVGIKVNSRKVLARVMEKAGVPEEIF
ANVCVVVDKIEKLPREKIIEELREVGLNEEATQSVLTCMETNSLEGLKSLLGEEDECAKE
MEKLFVLARAYGIEDWLVFDASVVRGLAYYTGVVFEGFDRRGELRAICGGGRYDGLISTL
GGEYTPMVGFGFGDAVIVELLKDRGLMPEEALKTMNVDDVVFSMDESCRETAMRAASVLR
KNGRRVDVVLEDGKKSKWTFKHAERVGAKRLLTIGKKEQEEGIVKVKNLETREEVDVSLD
KLA
NT seq
3252 nt
NT seq
+upstream
nt +downstream
nt
atgagtgttcgtcgtcgttgttattatcatcatcactgcgttcttcttttagtaaaactc
gcgtttgtgctttttttatgcgctgaagatgaaagcaacgagagaagagcaactttgttc
gtttcgggggcgaaaccatcaccgcgaggaaaaggaggaaaaggaaaaggaaaagacagc
atcggtttagaggagttaaaaacgaagttatcgattgcggagtcggcgatcgcgaaggtg
acgcaagagctcgtcgccagaggggaagatattggggagaagaagaagattatgatgaaa
ggagattccgaagaggaaaaggaagaggaagaggaggagaaaaacaacgacaacaacaag
aaaagagttgaatacgtttccagttggggatcgctgaacaaccactttcaatacgtctcg
gatacgtacaacgattattttggtaacaataataagaaaggcggttccggcgcttcgttg
agttcggcgctgttcggcggcggcggcgatagaaatagaggtaatagcgacgataatagt
agagtagctggggagggagaagagaagagtagcagtaataacgatgatgatgacgacgac
agtggtgacaaaaacaacgaaggagaaatctcgtcgtcgtcgtgctcgccgtcgtgttcc
aaataccaccggtgcgtggatgggaaatgtcgatgtcctgttttgtattcgggaccgaat
tgcacggaaaacggattcgaacgagccatagatacgaacgtcttcgaaaaggaaaaagta
atcaaatgcgccatgggtgtcaaccacgacccgttctattcgcaatacgaagaaaagtac
ggcgaaaaagcggacagaaaaatgcgcgtggcgcacattctccgttcgcgattcatcgcg
acgacgaaagaatctgctccagatctgcccgatttactcccgttcaatacgtgcgccgtc
gtcggatccaacggtaacatcgagaacaacaaaaactacggcaaagatatcgatactcac
gacgttgtcattcgattcaacgacgcgccaaccgtcggttacgaatccgtcgtcggcgcg
aaaacaaccattcgcatccaaaattccgatttctgcgccaaaggcgaacgaggctcaaaa
aatttcggcaacgaagtctgcgtccactacaccgcctctccaccggataaaatgtgcgaa
cgcgataaatccaaaggcggcaaaggaggttcttccgccggcaacggctcttgccgcctc
gtctacccttctcaccgcgacagcaaatacatcttctggtactggaaactcaacaaaatc
aaaggcgtcgaagacctctcctgcgcggaaaaccaaaagctcgggaagaagtgcaacatg
ttgaaaatgtccgccgggtattacggcatacaattagccttgaacttatgcggtaaagtc
aatttatacggtttcggcacgagccgagagacgcgagagacgaaacattacttcgtgaag
aaaagcgcctcctgggaccgcaaaggctgggcgcaacgacaccactggtcgtacgaaagg
ttttgcatcgacgcgttcgaagacgggttaatcgatgggttgaaagtgaatccttgtagt
atatactccgcgcaaagagcaaagagagattttttatcaacaaacataaacactttttca
agttttttgtcaaatcgatttttcttcaaaaacctcaaaaaaagctcaaagcattggata
aaagagacgaagatgttgagctcagtctcctcgaagtttctcttccggacacaccatcag
tggccaaattattatcgtcgtcatcacgcgcaatacgttttgaagaggacaactttgcgc
gcgctctcatctaccgcggaaggtggtggtggtaatggtggaggacgttcggtgacgaca
caaaccgccaacgtggacgcaaaaaaatccaacgcgcaacaacaacaacaatcacaaata
gagttgaatcctccgaaaggcacgcgagatttcccacccgaggaaatgcgaaaacgaaac
tggctcttcgacagttttcgccaaacggcgttgttgttcgggttcgaagagttcgacgcg
cccgtgttagaatccgaggcgttgtttactcgcaaagcgggcgaggagattcaaggacag
ctgtataatttttcggataaaggcgatcgaagagtgagtttacgaccggagttgacgccg
agtttagcgagattgatcatgcagaaagggaagagtttagcggtgccggcgaagtggttc
gcgattgggcagtgttggagatacgagaggatgactcgagggaggagaagagagcattac
cagtggaacatggacatcgtcggcgtggaaggcgtggaggcggaggtggaactgttgagc
gcgatttgccatttctttgcgagcgtggggattacgagcgaagacgtcggtatcaaggtg
aactcgaggaaagtgttagcgagagtaatggaaaaagcgggcgtgccggaggagatattc
gcgaacgtgtgcgtcgtcgtggacaaaattgaaaaattaccgagagagaaaatcatcgaa
gagttgagagaggttgggttgaacgaagaggcgacgcaatccgttttgacgtgcatggaa
acaaattcgttggaaggattgaaaagtttattaggcgaagaagacgagtgcgcgaaagag
atggagaagttgttcgtattagcgagagcgtatgggattgaagattggttagtctttgac
gcgtccgtggtgagaggattggcgtattataccggggttgttttcgaaggtttcgatcga
cgaggcgagctgagggcgatttgtggcggtgggaggtacgacgggttgattagcacgtta
ggcggtgaatacactcctatggttggttttggctttggcgacgcggtgattgtggaattg
ttgaaagatcgaggcttgatgccggaggaggcgttgaaaacgatgaatgtggacgacgtg
gtgttttccatggacgaaagttgccgagaaacggcaatgcgagcggcgagtgttttgagg
aaaaacgggagaagagtagacgtggttttagaggatgggaaaaagtccaagtggacgttt
aaacacgccgaacgcgtcggcgcgaagcggttgttgaccattgggaagaaagaacaggaa
gaggggattgtcaaggtgaagaatttggaaaccagggaggaagtggacgttagcttagat
aaactcgcataa
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