Bathycoccus prasinos: Bathy13g01730
Help
Entry
Bathy13g01730 CDS
T03089
Name
(RefSeq) hypothetical protein
KO
K10777
DNA ligase 4 [EC:
6.5.1.1
]
Organism
bpg
Bathycoccus prasinos
Pathway
bpg03450
Non-homologous end-joining
Brite
KEGG Orthology (KO) [BR:
bpg00001
]
09120 Genetic Information Processing
09124 Replication and repair
03450 Non-homologous end-joining
Bathy13g01730
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
bpg03400
]
Bathy13g01730
Enzymes [BR:
bpg01000
]
6. Ligases
6.5 Forming phosphoric-ester bonds
6.5.1 Ligases that form phosphoric-ester bonds (only sub-subclass identified to date)
6.5.1.1 DNA ligase (ATP)
Bathy13g01730
DNA repair and recombination proteins [BR:
bpg03400
]
Eukaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
DNA Ligase 4 complex
Bathy13g01730
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_ligase_A_M
DNA_ligase_A_N
DNA_ligase_A_C
BRCT_2
BRCT
Serinc
Motif
Other DBs
NCBI-GeneID:
19012125
NCBI-ProteinID:
XP_007509592
UniProt:
K8F3P7
LinkDB
All DBs
Position
13:complement(390436..393300)
Genome browser
AA seq
954 aa
AA seq
DB search
MLCFCAQLDKERAAYNLKEGALSDVICLALNLDKHSEMRTRIKNWKMSSKGLDFAVICGN
VAGEFIGRRNKKKSGGETGMTIDEVNEMLDNMCMGNDREAKARELRKFIMRATEKEVVWI
VSIILKDLKLGGVSEKDFLMHYHPQAYEAYTCKADLRKACEALSDRNAVLKKHDIECGEG
VIIAQLAGRKNTPKEVAKWARSKAFAVETKFDGERVQIHRNKESLGEKCQYWTRNMNDFG
PRGYGIMDVLFCDAAEEEGTRDTVDEHRRGLPPKCILDGEILVYNKRIKEFVPFGTIKRA
FNAANWKKNMGKNMPIIPKGFYENPTMQTKEKGQAKDKEEDDDEEGEEEEKEGNEDEEEE
EEEEEGEEGRVRYEWKDFEIVYVPFDILYNEDTSVIHEPLRKRYDLLKGAIRGCLNKGAV
KVGDTGITCAVVSPFQDDIADNESQAEIARKFRTVVEQNDPNAIAKISDCLREAQDHGEE
GIVVKLLDSPWVPGERGHNWVKLKPDYCETSDYDCVIIGGYYGEGRGRAGKISQWLLGVI
KDGTQRDKNPTIMTFCKVGTGFNREDQHYLRDKLKDLMRFNRKNVDKNYTKTYERYECSG
MLGETPDVWITNPEKSVVMTVKGDVRLVPSHTFNAPYGLRFPRCSAIRPEKPWNEICTDK
DIAETAERYVTKVTHKGSRGGDGVGNGEQGDDERTAYKEYDRKNAKGLKRKQKRSLAVQE
KYVAHMQPVDVRNVVTISKIFEGTTFSAIGCDRDVKKEIAQFVVARGGKFFESVVRNVNR
VVAPPTIEVDDAYLQACDEVLSTNWLFSCKEQEIWPPKARDWIKVSPSVATLYDKTIDAF
GDAHMSEDLNDEDFRAMRHQVCSRKRKGTEFKTLRHIDDDDRQNLGKIVRLSEESNTVIL
SQNSRPKKDLDPAIKEDDEREADRKRKNQDSSAHTQALELIQRRKAAAEMLRIY
NT seq
2865 nt
NT seq
+upstream
nt +downstream
nt
atgctctgtttttgcgcacagttggacaaagaacgcgcggcgtacaatctgaaagaaggc
gcgttatcggacgtcatatgcttggcgttaaacttagacaagcactcagagatgaggacg
agaataaaaaactggaagatgagctcgaaaggtttagatttcgcggtgatttgcgggaac
gtggcgggcgagttcatcgggagaaggaacaagaagaagagcgggggcgagaccgggatg
acgatagatgaagtcaacgaaatgttggataacatgtgcatgggaaacgatcgagaggcg
aaagcgagggagttgagaaagtttatcatgcgagcgacggagaaagaggtggtgtggatc
gtttccattattttgaaagacttgaagttgggaggcgtgtcggagaaggattttttaatg
cattatcatccgcaagcgtacgaggcgtacacgtgtaaagctgatttgaggaaagcgtgc
gaggcgctgtccgatcgaaatgcagttctgaagaagcacgatatcgagtgcggggaagga
gtaatcatagcgcagttggccgggaggaagaacacgccgaaggaagtggccaagtgggcg
aggtcgaaagcgtttgccgtggagacgaaatttgacggggagagggtgcagatacatagg
aacaaggagagtttaggtgaaaagtgtcagtattggacaaggaacatgaacgatttcggg
ccgagaggctacgggatcatggatgttttgttttgcgacgcagcggaagaagaagggacg
cgggacaccgtcgacgagcatcgacgaggattgccccctaaatgtattttagacggtgaa
atcctcgtatataacaagagaataaaagagtttgtgccgtttggaacgatcaaacgcgcg
tttaatgccgcgaactggaaaaaaaatatgggtaagaacatgccgatcataccgaaagga
ttttacgagaatccgacgatgcaaacgaaggaaaaggggcaagcgaaagataaagaagaa
gatgacgatgaagaaggagaagaagaagaaaaagaaggaaacgaggacgaagaggaagaa
gaagaagaagaagaaggggaagaagggagagtgcgatatgaatggaaagatttcgaaatc
gtatacgtcccgtttgatattctctacaacgaagacacgtcggtcattcacgaaccgttg
agaaaacgctacgacctcttgaaaggtgccattcgaggatgcttaaacaaaggtgccgtc
aaagtcggtgacactggaataacgtgtgcggtagtctcgccgttccaagatgacatcgcg
gataatgagtcgcaggcagagattgcgcgtaaatttagaacagttgtggagcaaaacgat
ccgaacgccattgcaaagattagcgattgcttgcgagaggctcaagatcacggcgaagaa
ggtatcgtcgtcaaattactcgattcgccgtgggttccaggagaacgggggcataattgg
gtgaaattgaagccagattactgcgaaacttcggattacgactgcgtcatcatcggcggc
tattacggcgaagggcgcggcagagcgggtaagatttcacagtggttgctcggggttatc
aaagacgggacgcaacgggataaaaatccaaccatcatgacgttctgtaaagtcgggacc
ggctttaaccgcgaggatcagcactatttgcgcgataagttgaaagatttgatgcgcttt
aatcgaaaaaacgtagataaaaactacacgaaaacttacgaaagatacgagtgctcgggg
atgctcggtgaaactccggatgtttggataacgaatccggagaaatccgtcgtgatgacg
gtgaaaggcgacgtacgtttggtaccttcgcacaccttcaacgctccttacgggttgcgc
tttccgagatgctcggcgatccgcccggagaaaccttggaacgaaatatgtacggataaa
gacatcgcggaaacagccgaacgctatgtgaccaaagtcacgcacaaaggaagtcgcggt
ggtgatggtgttggcaacggagaacaaggcgacgacgagcgaacggcgtataaagagtac
gatcgcaaaaatgccaaaggtttgaaacgaaaacaaaagagatccctagcggtccaggag
aagtacgtcgcgcacatgcaaccagtagacgttcgaaacgtcgtcaccatttccaaaatt
ttcgaaggcactacttttagtgccatcgggtgcgaccgagacgtcaaaaaggaaatcgca
caattcgtcgttgcccgcggcggtaaattttttgaaagcgtcgtcaggaacgtcaatcgc
gtggtcgccccgccaactatcgaagtcgacgacgcgtacctccaagcctgcgacgaagtt
ctatccacaaattggctcttctcgtgtaaagaacaagaaatatggccacctaaagccaga
gattggattaaagtgtccccgtctgtcgcgacgctctacgacaaaaccatcgacgcgttt
ggcgacgcgcacatgagcgaagacttgaacgacgaagattttcgcgcgatgaggcaccaa
gtgtgctcgcgcaaacgcaaaggcacggaattcaaaacgttgaggcacatagacgacgac
gatcgtcaaaatctcgggaagattgtgcgcctttcggaagaatccaacaccgtcatcctc
tcgcaaaacagccgcccgaagaaagacttggaccctgcgataaaagaagatgatgagaga
gaagcggaccgaaaaagaaaaaaccaagactcctccgcgcacacgcaagcgctggagtta
atccagagacgaaaagccgccgcagagatgttgcggatctattag
DBGET
integrated database retrieval system
