Paraburkholderia phymatum: Bphy_0778
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Entry
Bphy_0778 CDS
T00704
Name
(GenBank) Exonuclease RNase T and DNA polymerase III
KO
K13288
oligoribonuclease [EC:3.1.-.-]
Organism
bph
Paraburkholderia phymatum
Brite
KEGG Orthology (KO) [BR:
bph00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
bph03019
]
Bphy_0778
03009 Ribosome biogenesis [BR:
bph03009
]
Bphy_0778
Messenger RNA biogenesis [BR:
bph03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Ribonucreases
Bphy_0778
Ribosome biogenesis [BR:
bph03009
]
Eukaryotic type
Pre-60S particles
RNases
Bphy_0778
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GFIT
Motif
Pfam:
RNase_T
Rv2179c-like
RNase_H_2
Ribosomal_L10
Motif
Other DBs
NCBI-ProteinID:
ACC69967
UniProt:
B2JF38
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All DBs
Position
1:873247..873870
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AA seq
207 aa
AA seq
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MTDIIESVDQPLARTDMNLVWLDMEMTGLDPDNDRIIEIAVVVTNSTLDKMVEGPVLAIH
QSDETLGKMDDWNKNTHGRSGLIDRVRASTVTEADATERIRAFLGQHVPPGKSPMCGNSI
CQDRRFMARWMPELETFFHYRNLDVSTLKELCRRWQPAIYKGFQKRAMHTALADIHESID
ELRYYREHFLVPAASAADASSSDASAQ
NT seq
624 nt
NT seq
+upstream
nt +downstream
nt
atgactgacattatcgaatccgtcgaccagccgctcgcgcgcaccgacatgaatctcgtc
tggctcgacatggaaatgaccgggctcgatcccgacaacgaccgcatcatcgaaatcgcc
gtggtcgtgaccaattcgacgctcgacaagatggtcgaaggccccgtgctggctatccac
cagagcgacgaaacgctcggcaagatggatgactggaacaagaacacgcatggccgttcg
ggactgatcgaccgggtgcgggcatcgacggtgacggaagcggacgccacagagcgcatc
cgcgcttttctcggccagcacgtgccgcctggcaagtcgccgatgtgcggcaactcgatt
tgccaggaccgccgtttcatggcgcgctggatgcccgagctggaaacgttcttccattac
cgcaacctcgacgtcagcacgctgaaggaactgtgccgccgctggcagcccgcgatctac
aagggtttccagaagcgcgcgatgcatacagcattggccgatatccacgaatcgatcgac
gaactccgctactaccgcgagcacttcctcgttccggccgcgagcgcagctgacgcgtcg
tccagcgacgcgagcgcgcaatag
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