Burkholderia pseudomallei BPC006: BPC006_I3830
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Entry
BPC006_I3830 CDS
T02301
Name
(GenBank) DNA-directed RNA polymerase subunit alpha
KO
K03040
DNA-directed RNA polymerase subunit alpha [EC:
2.7.7.6
]
Organism
bpq
Burkholderia pseudomallei BPC006
Pathway
bpq03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
bpq00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
BPC006_I3830
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
bpq03021
]
BPC006_I3830
03400 DNA repair and recombination proteins [BR:
bpq03400
]
BPC006_I3830
Enzymes [BR:
bpq01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
BPC006_I3830
Transcription machinery [BR:
bpq03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Core subunits
BPC006_I3830
DNA repair and recombination proteins [BR:
bpq03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase complex (RNAP)
BPC006_I3830
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_A_bac
RNA_pol_A_CTD
RNA_pol_L
RNA_pol_L_2
RAD51D_N
Motif
Other DBs
NCBI-ProteinID:
AFR17663
LinkDB
All DBs
Position
I:complement(3719715..3720692)
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AA seq
325 aa
AA seq
DB search
MQTSLLKPKIIAVESLGENHAKVVMEPFERGYGHTLGNALRRVLLSSMVGYAPTEVTIAG
VVHEYSTLDGVQEDVVNLLLNLKGVVFKLHNRDEVTVTLRKEGEGVVTAGDIELAHDCEV
INPNHVIAHLSKGGKLDVQIKVEKGRGYVPGNVRRYGDETAKIIGRIVLDASFSPVRRVS
YTVESARVEQRTDLDKLVMNIETSGVITPEEAIRQSARILVDQLSVFAALEGTETAAEAP
SRAPQIDPILLRPVDDLELTVRSANCLKAENIYYIGDLIQRTENELLKTPNLGRKSLNEI
KEVLASRGLTLGMKLENWPPAGLDK
NT seq
978 nt
NT seq
+upstream
nt +downstream
nt
atgcaaaccagtttgttgaaacccaagatcatcgccgtggaatcgctgggcgagaaccac
gcgaaggtggtgatggagccgttcgaacgcggttacggccacaccttgggcaatgcgctt
cgccgtgtgctgctgtcgtcgatggtcggttacgcgccgaccgaagtgacgatcgccggc
gtcgtgcacgagtattcgacgctcgatggtgtgcaagaggacgtcgtcaacctgctgctg
aacctgaagggcgtggtgttcaagctgcataaccgcgacgaagtcacggtgacgctgcgc
aaggaaggcgaaggcgtcgtgacggccggcgatatcgaactggcccacgattgcgaagtc
atcaacccgaatcacgtgatcgcgcatctgtcgaagggcggcaagctcgacgtgcagatc
aaggtggaaaagggccggggctacgtaccgggcaacgtgcgccgctacggcgacgaaacg
gccaagatcatcggccgcatcgtcctcgacgcatcgttctcgccggttcgccgcgtgagc
tacacggtcgagagcgcgcgcgtcgagcagcgtaccgacctcgacaagctcgtgatgaac
atcgaaacgagcggcgtcatcacgccggaagaagcgatccgccagtcggcacgcatcctc
gtcgaccagctgtccgtattcgcggcgctggaaggcacggaaacggccgcggaagccccg
tcgcgcgcgccgcagatcgatccgatcctgctgcgcccggtcgacgacctcgagctgacc
gtgcgttcggcgaactgcctgaaggccgagaacatctactacatcggcgatctgatccag
cgcacggaaaacgagctgctgaagacgccgaacctcggccgcaagtcgctcaacgagatc
aaggaagtgctcgcttcacgcggtctcacgctgggcatgaagctcgagaactggccgccg
gccggcctcgacaagtaa
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