KEGG   Burkholderia pseudomallei BPC006: BPC006_I3928
Entry
BPC006_I3928      CDS       T02301                                 
Name
(GenBank) type I site-specific deoxyribonuclease HsdR
  KO
K01153  type I restriction enzyme, R subunit [EC:3.1.21.3]
Organism
bpq  Burkholderia pseudomallei BPC006
Brite
KEGG Orthology (KO) [BR:bpq00001]
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   02048 Prokaryotic defense system [BR:bpq02048]
    BPC006_I3928
Enzymes [BR:bpq01000]
 3. Hydrolases
  3.1  Acting on ester bonds
   3.1.21  Endodeoxyribonucleases producing 5'-phosphomonoesters
    3.1.21.3  type I site-specific deoxyribonuclease
     BPC006_I3928
Prokaryotic defense system [BR:bpq02048]
 Restriction and modification system (R-M system)
  Type I R-M system
   BPC006_I3928
SSDB
Motif
Pfam: EcoR124_C SWI2_SNF2 ResIII HSDR_N DEAD SNF2-rel_dom PBP_GOBP
Other DBs
NCBI-ProteinID: AFR17752
LinkDB
Position
I:complement(3804096..3807068)
AA seq 990 aa
MTSTENQIEQDLITKLGDLKYSYRPDIRDRAALEANFRAKFEALNRVRLTDSEFQRLLDG
IITPDVYNAAQTLRNINSFERDDGTPLNYTLVNIRDWCKNDFEVVNQLRINTDNSHHRYD
VMLLINGVPVVQIELKTLDVSPRRAMQQIVDYKSAPGNGYGKTLLCFVQLFIVSNRTDTW
YFANNNARHFSFNADERFLPVYQFASEDNKKITQLDSFAEKFLAKCTLGQMISRYMVLVA
SEQKLLMMRPYQIYAVKAIVDCIHQNCGNGYIWHTTGSGKTLTSFKASTLLKDNPDIDKC
LFVVDRKDLDRQTREEFNRFQEGCVEENTNTETLVRRLLSDEKADKVIVTTIQKLGLALD
GTNKRNYKERLEPLRNQRMVFIFDECHRSQFGENHKAIKEFFPNAQLFGFTGTPIFERNA
SYQQVEGQQASYRTTDDLFQRCLHQYTITHAIEDRNVLRFHVDYFKPEGKNPPKPGEGLD
KTKVIETILAKHDAATNERKFNAVLATARINDAIEYFEAFKTLQAKKLEEDDTFQPLNVA
CVFSPPAEGDRDVQQIQEDLPQEKEDNQEDPEGKKAALTRIIADYNARCGTNHRISEFDL
YYQDVQKRIKDQQYPNADLPHAQKIDITIVVDMLLTGFDSKYLNTLYVDKNLKHHGLIQA
FSRTNRVLNDSKPYGNILDFRQQQKPVEEAITLFSGEKIDNPREIWLVDPAPRVIDSLQA
ATQKLANFMQSQGLANSPEEVANLRGDAARSQFVNLFKEVQRFKTQLDQYTDLSEEQKTQ
ICQITPPEQLQGFKGVYLETAKRLKEQQDKEGDRALPEVQQLDFEFVLFASAVIDYDYIL
GLIARMTQEKPGKLTLNREQLIGLIQSDAKFIDEREDIADYIRGLPVGEALDEKQIRAGY
ERFKAEKKARELTDIAIRHGLATDALQAFVDEVLRRRIFDGEALSELMAPLGLGWKARTQ
KELALVEELTPLLHKLALGREISGLSAYEQ
NT seq 2973 nt   +upstreamnt  +downstreamnt
atgacctcgacagaaaatcagatcgaacaggacctgatcaccaagctcggcgacctcaag
tacagctaccggcccgatatccgcgatcgtgccgctctcgaagctaacttccgcgcgaag
ttcgaggcgctcaacagggttcgactgacagacagcgagtttcagcgcttgctcgacggc
atcattacgcccgacgtttacaacgccgctcagacgctgcgcaacatcaacagcttcgag
cgcgacgacggaacgccgctgaactacacccttgtcaacatccgcgactggtgcaagaac
gacttcgaagtggtcaatcagttgcgtatcaacaccgacaacagccatcaccggtacgat
gtgatgctgctgatcaacggcgtgccggtggtgcaaatcgagctgaaaaccctggacgtc
agcccgcgccgggctatgcagcagatcgtcgattacaaaagcgcccctggcaacgggtac
ggcaagacgctgctgtgcttcgtccaactcttcatcgtcagcaaccgcaccgatacctgg
tacttcgccaacaacaacgcgcgccacttcagcttcaatgctgacgaacgcttcttgcct
gtttaccagttcgcgagcgaggacaacaagaagatcacgcaactggacagctttgccgag
aaatttctggctaagtgcaccttggggcagatgatcagccgctatatggtgttggtggcc
agcgagcaaaagctgctcatgatgcggccgtaccaaatctatgccgtcaaggccatcgtg
gactgtatccaccagaactgcggcaatggctacatctggcacaccacgggcagcggcaag
acgctcacctcgttcaaggcctctaccctgctcaaggacaacccggacatcgataaatgc
ttgttcgtggtggaccggaaagacttggatcgccagacccgagaggaattcaaccgcttc
caggaggggtgcgttgaagagaacaccaacaccgaaacgctggtgcgccgattgctgtct
gatgagaaagcggacaaggtcatcgtcacaactatccagaagctggggctggcgctcgac
ggcaccaataagcgcaactacaaggagcgccttgagccactgcgtaaccaacgcatggtg
ttcatcttcgacgaatgccaccgttcgcaattcggtgagaaccacaaggccatcaaggag
ttctttcccaacgcccagttgttcggcttcaccggcacgcccatcttcgaacggaacgcc
agctaccaacaggttgaggggcagcaggccagctaccgcaccacagacgacctctttcag
cgctgcctgcaccagtacacgatcacccacgccatcgaagaccgcaacgtcctgcgcttc
cacgtggattacttcaagcccgagggcaagaacccacccaagcctggcgaaggcttggac
aagaccaaggtcatcgagacaatccttgccaagcacgatgccgccaccaacgagcgcaag
ttcaacgccgttctggctaccgcccgaatcaacgatgccattgagtatttcgaggctttc
aaaacgcttcaggccaagaagctggaagaagacgacaccttccagccgctgaacgtggca
tgcgtattttccccgcccgccgagggagatagggacgtgcagcagattcaagaagatctg
ccgcaggaaaaggaagataaccaagaggaccccgaaggcaagaaagccgcactcacccgc
atcattgccgactacaacgctcgctgtggcaccaaccaccgtatcagcgagttcgatctt
tactatcaggacgtgcaaaagcgcattaaggatcagcaataccccaatgccgatctgccg
cacgcccagaagatcgacatcaccattgtggtggacatgctgctcactggcttcgactcc
aagtacctgaataccttgtacgtggacaagaacctcaagcatcacgggctgattcaggcg
ttctcccgtaccaaccgcgtgctcaacgacagcaagccctacggcaacatcctggacttc
cgtcagcagcaaaagcccgtggaagaagccattacgctcttttccggcgagaagatcgac
aatccacgcgagatctggctggtggatcctgcacccagggtaatcgacagtctgcaggcg
gccacccagaagctggccaacttcatgcaatcgcaggggttggcgaattcaccggaagaa
gtggctaacctcaggggcgacgccgcgcgcagccagttcgtcaacctgttcaaggaagtg
cagcgcttcaagacccagctcgatcagtacaccgacctgagcgaagagcaaaaaacgcag
atctgccaaatcacgccacctgagcagttgcaaggcttcaaaggcgtgtatctggagact
gccaagcggctcaaggagcagcaggacaaagaaggcgatcgggccctgcccgaggtgcag
cagcttgatttcgagtttgtgctcttcgcttccgccgtcatcgactacgactacatcttg
gggctgatcgcccgcatgactcaggagaagcccggcaagctcacacttaatcgcgagcag
cttatcggcctgatccagtccgacgccaagttcatcgacgagcgcgaggacattgccgac
tacatccgcggcctgcctgtgggtgaggcattggacgaaaaacagattcgtgccggctac
gagcgttttaaggccgagaagaaggctcgggaactcaccgacatcgccatcaggcatggg
ctggccactgatgcgctgcaagcctttgtggacgaagtgcttcgccgccgcatcttcgac
ggcgaagcattgagcgagttgatggcgccgctgggtctgggctggaaggcacgtacccag
aaagagctggcgctggtagaggaactgacgccactgctgcacaagctcgccctagggcgt
gagatttcgggactgagtgcgtatgagcaataa

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