Butyrate-producing bacterium SM4/1: CL3_16610
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Entry
CL3_16610 CDS
T02610
Name
(GenBank) DNA polymerase III, delta' subunit
KO
K02341
DNA polymerase III subunit delta' [EC:
2.7.7.7
]
Organism
bprm
Butyrate-producing bacterium SM4/1
Pathway
bprm03030
DNA replication
bprm03430
Mismatch repair
bprm03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
bprm00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
CL3_16610
03430 Mismatch repair
CL3_16610
03440 Homologous recombination
CL3_16610
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
bprm03032
]
CL3_16610
03400 DNA repair and recombination proteins [BR:
bprm03400
]
CL3_16610
Enzymes [BR:
bprm01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
CL3_16610
DNA replication proteins [BR:
bprm03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
CL3_16610
DNA repair and recombination proteins [BR:
bprm03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
CL3_16610
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol3_delta2
DNApol3-delta_C
AAA
nSTAND3
AAA_22
DNA_pol3_gamma3
AAA_2
DUF5520
AAA_19
Motif
Other DBs
NCBI-ProteinID:
CBL36217
UniProt:
D4MR31
LinkDB
All DBs
Position
complement(1451280..1452269)
Genome browser
AA seq
329 aa
AA seq
DB search
MAGFKDIIGHEMIKDHFQKAIEYHKVSHAYILSGEQGMGRKTLAKAFAMTLLCEKSDKEP
CMECHSCKQILSGNHPDVIWVTHEKPNSIGVDDIREQLNDTIQIKPYSSAYKIYLVDEAE
KMTVQAQNALLKTIEEPPSYAVIILMTTNEEAFLPTILSRCIKLKLRPLKDQTVSSYLME
SMGIGESQADIYAAFARGNLGKAIHLASSEEFKLLYREILNLLKHVKEMDLVMLLDYIKK
MQEENLDLDECLDFMQLWYRDILMYKVTKDMNCLIFKEEYTTVSKLCQNSSYEGLETILN
AIDKAKARLAANVNTELALELMLLTMKEN
NT seq
990 nt
NT seq
+upstream
nt +downstream
nt
atggcaggctttaaagatattatcggacatgaaatgataaaggatcattttcagaaagca
atcgaataccacaaggtttcccatgcgtatatcctttcgggcgagcaggggatgggaagg
aagacattagctaaggcatttgccatgacgctgctctgtgaaaaaagtgataaggaaccg
tgcatggaatgtcattcctgcaaacagatactgagcgggaaccatccggatgtgatctgg
gtcacccatgaaaagccaaacagcatcggtgttgacgatatacgggagcagctcaatgac
accatacagattaagccctacagcagcgcctacaagatctatctggtggacgaggcggag
aaaatgacggttcaggctcagaacgcccttttaaagaccattgaggagccgccgtcctat
gcggtgattattctgatgaccaccaacgaggaggcatttctgccgaccatcctgtcacgg
tgtattaagctgaagctgagaccattaaaggatcagaccgtcagcagctatctgatggaa
tccatgggaatcggggagagccaagcggatatctatgcggcatttgccagaggaaatctg
ggaaaggccattcatctggcgtcttcagaggagtttaagctgctttacagggagattctg
aaccttttaaagcatgtgaaggagatggatcttgtcatgcttctcgactacatcaagaag
atgcaggaggaaaacctcgatctggacgagtgcctggatttcatgcagctctggtacagg
gacattttgatgtacaaggtgacaaaggatatgaactgcctgatttttaaggaggaatat
acaaccgtcagcaagctctgccagaacagctcctatgaggggcttgagaccattctgaat
gccattgacaaggcaaaggcaaggctggcggccaatgtaaatacagagctcgcccttgag
cttatgctcttaacaatgaaggagaattag
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