Burkholderia pseudomallei NAU35A-3: BBU_4108
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Entry
BBU_4108 CDS
T03476
Symbol
benM
Name
(GenBank) HTH-type transcriptional regulator BenM
KO
K21757
LysR family transcriptional regulator, benzoate and cis,cis-muconate-responsive activator of ben and cat genes
Organism
bpsa
Burkholderia pseudomallei NAU35A-3
Brite
KEGG Orthology (KO) [BR:
bpsa00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
bpsa03000
]
BBU_4108 (benM)
Transcription factors [BR:
bpsa03000
]
Prokaryotic type
Helix-turn-helix
LysR family
BBU_4108 (benM)
BRITE hierarchy
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Ortholog
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GFIT
Motif
Pfam:
LysR_substrate
HTH_1
NMT1_3
HTH_30
DUF2802
SBP_bac_3
HTH_24
HTH_20
SBP_bac_11
Motif
Other DBs
NCBI-ProteinID:
AIS90112
LinkDB
All DBs
Position
2:865079..865993
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AA seq
304 aa
AA seq
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MELRHLRYFVAVAEEQNFTRAAERLHIAQPPLSRQIQQLEEALGVTLFERHARPLKMTDA
GRFFYSHAVQLLAQTAELEAMTKRVGKIERALSVGFVGSTLYGMLPRIIRRFRAEHGEVE
LSLHEMSTMDQIQALKDGRIDVGFGRIRHEDARVRRVVLREERMIVALPDGHPLEAAKPV
LSLHDLVNETLIIFPKSPRPSYADQVLAAFHDRALKPRRIYETRELQIALGLVAAGEGVS
VVPHSVYGLKRDDVGYKELDDPNLVSPIIMSTRMLDESEDIRAMLELIYRLYDEFKMTYL
PPHG
NT seq
915 nt
NT seq
+upstream
nt +downstream
nt
atggaactgcggcatctacgctacttcgtcgcggtcgcggaggagcagaacttcacgcgc
gcggccgagcgcctgcacatcgcgcagccgccgttgagccgccagatccagcagctcgag
gaggcgctcggcgtgacgctgttcgagcgccatgcgcggccgctgaagatgaccgacgcg
gggcgcttcttctattcgcacgcggtgcaattgctcgcgcagacagccgagctcgaagcg
atgacgaagcgcgtcggcaagatcgagcgcgcgctgtcggtgggctttgtcggctcgacg
ctgtacgggatgctgccgcgcatcatccggcgctttcgcgccgagcacggcgaagtcgag
ctgagcctgcacgagatgtcgacgatggatcagatccaggcgctcaaggacgggcgcatc
gacgtcggcttcgggcgcattcgtcatgaggatgcgcgcgtgcggcgcgtcgtgctgcgc
gaggagcggatgatcgtcgcgctgccggacgggcatccgctcgaggcggccaagccggtg
ctgtcgctgcacgacctcgtcaacgagacgctgatcatctttccgaagtcgccgcggccg
agctacgcggaccaggtgctcgccgcgtttcacgaccgcgcgctgaagccgcgccggatc
tacgagacgcgcgagctgcagatcgcgctcgggctcgtcgcggcgggcgagggcgtgtcc
gtcgtgccgcacagcgtgtacgggctcaagcgcgacgacgtcggctacaaggagctcgac
gatccgaacctcgtgtcgccgatcatcatgagcacgcggatgctcgacgaatcggaggac
attcgcgcgatgctcgagttgatttatcgtttgtacgacgaattcaagatgacgtatctg
ccgccgcacggatga
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