Bifidobacterium pseudocatenulatum: BBPC_0195
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Entry
BBPC_0195 CDS
T03932
Name
(GenBank) D-alanine-D-alanine ligase
KO
K01921
D-alanine-D-alanine ligase [EC:
6.3.2.4
]
Organism
bpsc
Bifidobacterium pseudocatenulatum
Pathway
bpsc00470
D-Amino acid metabolism
bpsc00550
Peptidoglycan biosynthesis
bpsc01100
Metabolic pathways
bpsc01502
Vancomycin resistance
Brite
KEGG Orthology (KO) [BR:
bpsc00001
]
09100 Metabolism
09106 Metabolism of other amino acids
00470 D-Amino acid metabolism
BBPC_0195
09107 Glycan biosynthesis and metabolism
00550 Peptidoglycan biosynthesis
BBPC_0195
09160 Human Diseases
09175 Drug resistance: antimicrobial
01502 Vancomycin resistance
BBPC_0195
09180 Brite Hierarchies
09181 Protein families: metabolism
01011 Peptidoglycan biosynthesis and degradation proteins [BR:
bpsc01011
]
BBPC_0195
Enzymes [BR:
bpsc01000
]
6. Ligases
6.3 Forming carbon-nitrogen bonds
6.3.2 Acid-D-amino-acid ligases (peptide synthases)
6.3.2.4 D-alanine---D-alanine ligase
BBPC_0195
Peptidoglycan biosynthesis and degradation proteins [BR:
bpsc01011
]
Precursor biosynthesis
Amino acid ligase
BBPC_0195
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Dala_Dala_lig_C
Dala_Dala_lig_N
ATP-grasp
CPSase_L_D2
ATP-grasp_4
GARS_A
Motif
Other DBs
NCBI-ProteinID:
BAR02873
UniProt:
C0BQZ4
LinkDB
All DBs
Position
261582..262736
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AA seq
384 aa
AA seq
DB search
MEHKTKMAKQRIVVMYGGKADEHSISCISAAGVLRALDTDKFEAIEVGITKNGEWIVGGE
DPRKWNMSEGLPMVEKTDSSKDVVLDVALGQDGFFAREDDGTLTSLGHVDAVLPVLHGPY
GEDGTIQGLFEMMNVPYVGCGVLASAACMDKHYTKVLLAAAGIPVAPGITLDVRDYDAAS
EFAAEADEMLAAVQQAGLQYPLFVKPSRAGSSFGVTKVEHEGDAAELAAAVFEASHHDWR
VLVEQGIDAREIECAVLCPKAGEAPQASWPGEIVLDKRAEGDDQFYDFDSKYVNSDASHV
EVPASLPEETLNRVRETAKKAFIAVDGAGLSRVDTFVTADGEVMVNEINTMPGFTPISMY
PKAWEATGVSYTDLITTLIEGVLR
NT seq
1155 nt
NT seq
+upstream
nt +downstream
nt
atggagcataagacaaagatggcaaaacagcgcattgtggtgatgtatggcggcaaagcc
gacgagcattcgatttcctgcatctctgcggcgggcgtgctgcgcgcgttggatactgac
aagttcgaagccattgaggtgggaatcaccaagaacggcgagtggatcgtaggcggcgag
gatccacgcaagtggaacatgagcgaaggcctgccgatggtggagaagacggattcctcc
aaagatgtggtgctggatgtggcactcggccaggatggtttcttcgctcgtgaagatgac
ggcacgctgacttcgcttggccacgtggacgccgtgcttccggtattgcatggtccgtac
ggtgaggatggcacgattcagggcctgttcgaaatgatgaacgtgccgtacgttggctgc
ggtgtgctcgcttccgccgcttgcatggacaagcattatacgaaggtattgctggctgcg
gccggtattcccgtggctccaggcatcacgttggatgtgcgcgattatgatgccgcttcc
gaattcgccgccgaggcggacgagatgcttgccgcggtgcagcaggccggattgcagtac
ccgctgttcgtgaagccgtcccgcgccggttccagcttcggcgtgaccaaggtcgaacat
gagggcgatgcggccgagcttgccgccgcagtgttcgaagcgtcccaccatgattggcgt
gtgctcgtggaacagggcatcgacgcgcgcgaaatcgaatgcgccgtgctctgcccgaag
gccggcgaggctccgcaggccagctggccgggcgaaatcgtgcttgacaagcgtgccgag
ggcgacgaccagttctatgatttcgacagcaagtacgtgaactccgacgcaagccatgtg
gaagtgcccgcaagcctgccggaagaaactctgaaccgcgtgcgcgaaaccgccaaaaaa
gcgttcatcgcagtcgacggcgccggcctgagtcgtgtcgacaccttcgtgacggccgac
ggcgaagtgatggtcaacgaaatcaacaccatgccgggcttcaccccgatttccatgtat
cccaaggcatgggaggcaaccggcgtgagctacaccgatctgatcaccacgctgatcgag
ggcgtgctgcgctga
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