Bifidobacterium pseudocatenulatum: BBPC_0488
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Entry
BBPC_0488 CDS
T03932
Name
(GenBank) oligoribonuclease
KO
K13288
oligoribonuclease [EC:3.1.-.-]
Organism
bpsc
Bifidobacterium pseudocatenulatum
Brite
KEGG Orthology (KO) [BR:
bpsc00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
bpsc03019
]
BBPC_0488
03009 Ribosome biogenesis [BR:
bpsc03009
]
BBPC_0488
Messenger RNA biogenesis [BR:
bpsc03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Ribonucreases
BBPC_0488
Ribosome biogenesis [BR:
bpsc03009
]
Eukaryotic type
Pre-60S particles
RNases
BBPC_0488
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_T
Motif
Other DBs
NCBI-ProteinID:
BAR03166
UniProt:
C0BQ12
LinkDB
All DBs
Position
604926..605576
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AA seq
216 aa
AA seq
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MVDAHDGETYTAKDSRLIWIDCEMTGLDIFHDELCEISVVPTDFDLNVLDEGIDFVIKPS
NAAVANMNDFVRAMHTRSGLINEWENGLSVEEAERKVTEYVARFTPDGVKPLLAGNSIGS
DKKFLDRYMPNLMEHLHYRVIDVSTFKELARRWYPAVYNNRPPKNGGHRALADIIESLDE
LRYYRKAFMAAAPGPDAAEAKAIADQIVATSILNNN
NT seq
651 nt
NT seq
+upstream
nt +downstream
nt
atggttgacgcacatgacggcgaaacgtatacagcgaaagattcgcgactgatttggatc
gattgcgaaatgaccggcttggatattttccacgatgaactgtgcgagatctccgtggta
ccgacggacttcgacctcaacgtgcttgacgagggtattgatttcgtgatcaagccgtct
aatgcggccgttgccaatatgaacgatttcgtgcgtgccatgcacacccgttccggactc
atcaacgaatgggagaacggcctgagcgtcgaagaggccgaacggaaagtcaccgaatac
gtggcccgcttcaccccggacggcgtcaagccgctgctcgcaggcaactccatcggatca
gacaaaaaattcctcgaccgttacatgccgaatctcatggaacacctgcactaccgtgta
atcgacgtgagcacgttcaaagagcttgcccgccgctggtatcctgccgtatacaacaac
cggccgccgaagaacggcggacatcgcgcgctcgccgacatcatcgaatccctggacgaa
ctgcgctactaccgtaaggcgttcatggcagcggcgcccggtcctgacgcagccgaagcc
aaggcgatcgccgatcagatcgtggcaaccagcattttgaacaacaactga
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