KEGG   Bifidobacterium pseudocatenulatum: BBPC_0488
Entry
BBPC_0488         CDS       T03932                                 
Name
(GenBank) oligoribonuclease
  KO
K13288  oligoribonuclease [EC:3.1.-.-]
Organism
bpsc  Bifidobacterium pseudocatenulatum
Brite
KEGG Orthology (KO) [BR:bpsc00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:bpsc03019]
    BBPC_0488
   03009 Ribosome biogenesis [BR:bpsc03009]
    BBPC_0488
Messenger RNA biogenesis [BR:bpsc03019]
 Prokaryotic type
  Bacterial mRNA degradation factors
   RNA degradosome components
    Ribonucreases
     BBPC_0488
Ribosome biogenesis [BR:bpsc03009]
 Eukaryotic type
  Pre-60S particles
   RNases
    BBPC_0488
SSDB
Motif
Pfam: RNase_T
Other DBs
NCBI-ProteinID: BAR03166
UniProt: C0BQ12
LinkDB
Position
604926..605576
AA seq 216 aa
MVDAHDGETYTAKDSRLIWIDCEMTGLDIFHDELCEISVVPTDFDLNVLDEGIDFVIKPS
NAAVANMNDFVRAMHTRSGLINEWENGLSVEEAERKVTEYVARFTPDGVKPLLAGNSIGS
DKKFLDRYMPNLMEHLHYRVIDVSTFKELARRWYPAVYNNRPPKNGGHRALADIIESLDE
LRYYRKAFMAAAPGPDAAEAKAIADQIVATSILNNN
NT seq 651 nt   +upstreamnt  +downstreamnt
atggttgacgcacatgacggcgaaacgtatacagcgaaagattcgcgactgatttggatc
gattgcgaaatgaccggcttggatattttccacgatgaactgtgcgagatctccgtggta
ccgacggacttcgacctcaacgtgcttgacgagggtattgatttcgtgatcaagccgtct
aatgcggccgttgccaatatgaacgatttcgtgcgtgccatgcacacccgttccggactc
atcaacgaatgggagaacggcctgagcgtcgaagaggccgaacggaaagtcaccgaatac
gtggcccgcttcaccccggacggcgtcaagccgctgctcgcaggcaactccatcggatca
gacaaaaaattcctcgaccgttacatgccgaatctcatggaacacctgcactaccgtgta
atcgacgtgagcacgttcaaagagcttgcccgccgctggtatcctgccgtatacaacaac
cggccgccgaagaacggcggacatcgcgcgctcgccgacatcatcgaatccctggacgaa
ctgcgctactaccgtaaggcgttcatggcagcggcgcccggtcctgacgcagccgaagcc
aaggcgatcgccgatcagatcgtggcaaccagcattttgaacaacaactga

DBGET integrated database retrieval system