Bifidobacterium pseudocatenulatum: BBPC_1287 Help Entry BBPC_1287         CDS       T03932                                  Name (GenBank) ATP-dependent helicase   KO K03578   ATP-dependent helicase HrpA [EC:5.6.2.6] Organism bpsc  Bifidobacterium pseudocatenulatum Brite KEGG Orthology (KO) [BR:bpsc00001]  09190 Not Included in Pathway or Brite   09191 Unclassified: metabolism    99980 Enzymes with EC numbers     BBPC_1287 Enzymes [BR:bpsc01000]  5. Isomerases   5.6  Isomerases altering macromolecular conformation    5.6.2  Enzymes altering nucleic acid conformation     5.6.2.6  RNA 3'-5' helicase      BBPC_1287 BRITE hierarchy SSDB OrthologParalogGene clusterGFIT Motif Pfam:  DUF3418 OB_NTP_bind DEAD Helicase_C AAA_22 AAA_19 HA2_C SLFN-g3_helicase T2SSE nSTAND3 AAA_30 NACHT AAA_11 Zeta_toxin AAA_16 ResIII TsaE SRP54 Motif Other DBs NCBI-ProteinID:  BAR03965 UniProt:  C0BSB6 LinkDB All DBs Position 1538797..1542897 Genome browser AA seq 1366 aa AA seqDB search MKFEYPSQLPVSAARSDIAEAVKSSQVVIVSGQTGSGKTTQLPKILLELGRGSHGRQIVH TQPRRLAARTVAERIAAEMGVRLGDEVGYQVRFTDESSPKTRLRVVTDGILLAQIQRDPK LMQYDTIVIDEAHERSLNIDFLLGYLTALLPKRRDLKLVITSATIDSVKFQEHFEHALHT KVPVIEVSGRTYPVQVVYEPLGTAPALMRSVPGFETGAMPGDADYETLSAAPDAKDSREP NVDMPTAVARACAELVIHSSHDRGPRDILVFASGERDIHDFENALRHHYGPRAIDMRRPD AIEIVPLFARLSSKEQHRVFEPHDHQRIVIATNVAETSLTVPGIRYVVDPGTARISRYSK SAKVQRLPIEPISQASANQRSGRCGRIADGIAIRLYSREDFETRPEFTEPEILRTSLGAV VLHMLSVGVARTAQDVTDFGFIDPPDMKAVSDGFNELTELKAVARKHGEVVLTHTGRMLA RIPIDVRLGRMIIEAAKSTTPNTLAAVLVVVAFLSLQDPRERPDENREEADRIHNRYADP SSDFLTALNLWDRVFQADGEPSNSALRRICKTEYLSWLRIRQWKDLVTQLREMCKEFKFK VGDPIPASRPPLEIRQLPSNQQAAHSLCCSWDAQGIHTSMLSGLLSMMGMQIVREPKASD FAGLKGAARARAMKRAQKMAKNDYQGARGTHFALFPASAVAKSTPQWVMSTELVETSRLW ARYSAQIDPAWAEPLAGSLTRTTYADPHWSGSRGSAVASAKVLLYGLPIVQDRTVQWGRI NPLEARDFLIRQGLVEGDIQQRFSYDDFIAKNRDVLEDAADDASRTRQMAQAVSDEDLFD FYNSVIPNTVTSVADLAKWWKSKHDEQPDLLDFDPEKVERLADAESVSLADYPDHWHTLG TDGSPIDLRLSYVYDPHDPNDGVTVHVPLKVLSRLTPEQFTWNVPGLLDELIVGMIKSLP KTLRVQFVPAPDTARKIRAWIDERYPDLPGSGNQQKPNLAPTNAEGVAAWPDLPHTFTQA AISIVGAQIHPEVLTGELWSKLMPYLRVTFSVEQQLPPSRKSQHGRRHARGPVKVLGSGK SLVELQRKFAEQAEASARQMVKKQAENAGNQGKLVEQANLLHKAGATTEARSTMLWRGAL DVLRMPSERISSRWLGAEALMLASAPYQSTKDLTEDLQLAAVKRLLPNVDELPDDEALAN AVLDVREVFEDTVYAVAHDVIAILKRYAEVDKAVSGKADLPMLSVLQSIREHIATLVYPG FIGKTPPDALAPIERYLHADVLRLGKAKNDKNRDVRWAWEADEAKQLADKAMAKAEREPA GPRHEALMKQAVTARWMLEEFYVSLWAQELGTPKPISLQRIKKALS NT seq 4101 nt NT seq  +upstreamnt  +downstreamnt atgaaattcgaatatccttcccaactgccggtttccgctgcacgtagcgatattgccgag gcggtgaagtcgagccaagtcgtgattgtgtctggtcagacgggttccggtaagaccacg cagctgccgaagattctgttggaattgggccgtggatcgcatggcaggcagattgtgcac acgcagccgcgtaggctggccgctcgtaccgtggccgaacgtatcgccgcggagatgggc gtgcgtttgggcgacgaggtcggctatcaggtgcgtttcaccgatgagagctcaccgaag acccgtcttcgcgtggtgaccgacggtattctgttggcgcagattcaacgcgatccgaaa ctgatgcaatacgatacgatcgttatcgacgaggcgcacgaacgtagtctcaatattgac tttctgctcggttatttgactgcgctattgccgaaacgacgtgacctgaaattggtaatc acgtcggcgacgattgattcggtgaagttccaggagcatttcgagcacgctttgcatacg aaagtgccggttatcgaggtttcgggacgaacctaccccgtgcaggtcgtgtatgagccg ctgggcaccgctcccgcgttgatgcgttccgtacccggttttgaaactggcgcgatgccg ggcgatgccgactatgaaacgttgtcggccgctcctgacgcgaaggattcccgcgagccg aacgttgacatgccgacggcggtggcgcgcgcctgtgccgagttggtgattcattcgagt catgaccgtggaccgcgcgatattctcgtgttcgcctcgggcgagcgcgacattcatgat tttgagaatgcgctgcgccatcattatggtccgcgtgccattgatatgcgtcgtcctgat gcgattgagatcgtgccgttgttcgcgcggttgtcctccaaggagcagcatcgcgtgttt gagccgcatgaccatcagcgtattgtgatcgctacgaatgtggccgaaacgtcgttgacg gtgccgggcattcgttatgtggtcgaccctggcaccgctcgtatttcacgttattcgaag agcgcgaaagtgcaacggcttccgattgaaccgatcagtcaggcgagcgcgaaccaacgt tcgggtcgttgcggccgtattgcagatggtattgcgattcgcttgtattctcgcgaggat ttcgagacgcgcccggaattcacggagcctgagattctgcgcacgtcgttgggtgcggtc gtattgcatatgctgtcggtgggtgtggctcgtaccgcgcaggatgttacggatttcggc ttcatcgatccgcctgatatgaaggcggtgtctgatggtttcaatgagttgaccgagttg aaggccgtggcgcgcaagcatggcgaggttgtgctgacgcacacgggtcgcatgcttgca cgcattccgatcgacgtgcgtttgggccgtatgatcatcgaggctgcgaagtcgaccacg ccgaacacgttggccgcagtgctggtggtggtcgcgttcctaagtttgcaggatccccgc gaacgtccggatgagaatcgtgaggaggccgaccgcattcataaccggtatgccgatccg tccagtgattttctgaccgcgttgaacttgtgggatcgcgtgttccaagctgatggcgag ccgagcaattccgcgcttcgtaggatttgcaagactgagtatttgagttggctgcgcatc cgtcagtggaaggatctggtcacgcagttgcgtgagatgtgcaaggaattcaagttcaag gttggcgatccgattccggcttcgcgtccgccgcttgagattcgtcagcttccgtcgaat cagcaggctgcgcattcgttgtgttgttcgtgggatgcgcagggtattcatacgtcgatg ctttcgggcttgttgtcgatgatgggcatgcagatcgtgcgtgaaccgaaggcatctgat ttcgctggcttgaagggcgctgcccgtgcgcgtgccatgaagcgtgcgcagaagatggcg aagaatgattatcagggtgcgcgtggcacgcatttcgcattgttcccggcttccgcggtc gccaagtcgacaccgcaatgggtgatgagcacggagttggtggaaacgagccgcttgtgg gcgcgatattccgcccagatcgatcccgcttgggctgaaccgttggcgggttcgttgacg cgaaccacgtatgcggatccgcattggtcaggctcgcgtggctccgcggtggcgagcgcg aaggtactgttgtatggtttgccgatagtgcaggatcgtacggtgcagtggggtcgtatc aatccgctggaggcccgtgattttctgattcgtcagggtttggtcgagggcgatattcag cagcggttctcgtatgacgatttcattgcgaagaatcgcgatgtgctggaggacgccgcc gacgatgcgagtcgcacacgtcagatggcgcaggcggtcagtgatgaggatctgttcgat ttttataattcggtgattcccaatactgtcacgtcggttgcggatcttgcgaaatggtgg aagtcaaagcatgatgagcagccggatttgttggattttgatccggagaaggtggagcgt cttgctgatgccgagtcagtgtcgttggctgattatccggatcattggcatacgttgggt acggacggctcccctatcgatttgcggttgagttatgtgtatgatccgcatgatccaaac gatggcgtgaccgtgcatgtgccgttgaaggtgttgtctcgtttgacaccggaacagttc acgtggaatgttcccggattgttggatgagttgattgtcggcatgatcaagtcgttgccg aagacgttgcgcgtgcagtttgttcccgctcctgatacggctcgtaagattcgtgcgtgg attgatgagaggtatccggatctgcctggttccggtaaccagcagaagccgaatcttgct cctaccaatgcggagggtgtggccgcgtggccggatttgcctcatacgttcacgcaggcg gcaatcagcattgttggcgcgcagattcaccctgaagtgttgactggtgaattgtggagc aagctcatgccgtatttgcgcgtgacgttctctgtggagcagcagttgcctccgagtcgc aagagtcagcatggcaggcgtcatgcgcggggccctgtcaaggtgcttggctcgggcaaa tcgttggtggagttgcagcgcaagtttgcggagcaagccgaggcttccgcacggcagatg gtgaagaagcaggcggaaaacgctggaaatcagggcaagcttgtggagcaggccaatctg ctgcataaggctggtgccactaccgaagctcgttccaccatgctgtggcgcggtgcactt gatgttttgcgtatgccgagcgagcgtatttcgtcgcgttggttgggtgcggaggcgttg atgttggcgtccgcaccatatcagtccacgaaggatcttactgaggatctgcagttggct gcggtgaagcgtttgctgccgaatgttgacgaattgccggatgatgaggcgttggcgaat gcggtgcttgatgtacgtgaagtgttcgaagataccgtgtatgcggttgcgcatgatgtg atcgctattttgaagcggtatgcggaggttgataaagccgtgtcaggcaaggccgatctg ccgatgttgagcgttttgcagtcgattcgtgagcatatcgccacgctggtgtatccggga ttcattggtaagactcctccggatgcgttggcgccgattgaacggtatctgcatgctgac gtgcttcgtttaggtaaggcgaagaacgacaagaatcgtgatgtgcgttgggcttgggag gctgatgaggccaagcagttggccgacaaggccatggcgaaggccgaacgtgagcctgca ggtccgcgtcatgaggcgttgatgaagcaggcggtcaccgcacgttggatgcttgaggaa ttctacgtatcattgtgggcgcaggaactcggcacgccgaagccgatcagcctgcagcgc atcaagaaagcgttgagctaa

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