Bacillus pumilus MTCC B6033: BW16_08595
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Entry
BW16_08595 CDS
T03175
Name
(GenBank) RNA polymerase sigma factor SigD
KO
K02405
RNA polymerase sigma factor FliA
Organism
bpum
Bacillus pumilus MTCC B6033
Pathway
bpum02020
Two-component system
bpum02040
Flagellar assembly
Brite
KEGG Orthology (KO) [BR:
bpum00001
]
09130 Environmental Information Processing
09132 Signal transduction
02020 Two-component system
BW16_08595
09140 Cellular Processes
09142 Cell motility
02040 Flagellar assembly
BW16_08595
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
bpum03021
]
BW16_08595
09183 Protein families: signaling and cellular processes
02035 Bacterial motility proteins [BR:
bpum02035
]
BW16_08595
Transcription machinery [BR:
bpum03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
BW16_08595
Bacterial motility proteins [BR:
bpum02035
]
Flagellar system
Flagellar assembly proteins
Stator
BW16_08595
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma70_r4
Sigma70_r2
Sigma70_r3
Sigma70_r4_2
HTH_23
UPF0122
UPF0175
TerL_ATPase
HTH_38
CT_C_D
HNF-1_N
PDZ_2
HTH_37
Motif
Other DBs
NCBI-ProteinID:
AHL71438
LinkDB
All DBs
Position
1626349..1627116
Genome browser
AA seq
255 aa
AA seq
DB search
MQSLNYEDQALWARWKEWKDPAAGDDLMRRYMPLVTYHVGRISIGLPKSVHKEDLISLGM
LGLYDALEKFDPGRDLKFDTYASFRIRGAIIDGLRKEDWLPRTSREKTKKVEAAIEKLEQ
RYLRNVTPTEVAEELGMSEQDVVTTMNEGFFANLLSIDEKLHDQEDGENVQVMIRDEKTV
TPEEKMLKDELIEQLAEKMTELSEKEKLVISLFYKEELTLTEIGQVLNLSTSRISQIHSK
ALFKLKHLLDKAIQS
NT seq
768 nt
NT seq
+upstream
nt +downstream
nt
atgcaatccttaaattacgaagatcaggcgctatgggctagatggaaagagtggaaggac
ccagctgctggagatgatcttatgcgccgctatatgccgctcgtcacatatcatgttgga
agaatttccatcggtctcccgaagtcagtgcacaaagaagacttgatcagtctagggatg
ctcggtttatatgatgcccttgaaaaatttgaccccggaagagatctgaagtttgataca
tatgcatccttcagaattcgcggggccatcatcgacggtcttcgtaaagaggactggctg
cctcgtacatcaagagaaaaaacaaaaaaagtagaagcggcaattgaaaagcttgaacag
cgatatttgcgaaatgtgacaccaacagaggttgctgaagaactcggcatgagtgaacaa
gatgtggtcacaacgatgaatgaagggttctttgcgaatttgctctcgattgatgagaag
ctgcatgatcaagaagacggagaaaacgttcaagtcatgattcgcgacgaaaagactgtg
acacctgaagaaaaaatgctgaaagatgaattaattgaacagcttgccgaaaaaatgaca
gagctttcggaaaaagaaaagcttgtgattagtcttttctataaagaggaattgacgtta
acggaaattggtcaagtacttaatttatcgacctcccgcatttcgcaaattcattcaaag
gcattgttcaagcttaagcatctgcttgataaagccattcaatcttaa
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integrated database retrieval system