Bacillus pumilus SH-B9: UP12_18040
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Entry
UP12_18040 CDS
T04776
Name
(GenBank) pectate lyase
KO
K01728
pectate lyase [EC:
4.2.2.2
]
Organism
bpus
Bacillus pumilus SH-B9
Pathway
bpus00040
Pentose and glucuronate interconversions
bpus01100
Metabolic pathways
bpus02024
Quorum sensing
Brite
KEGG Orthology (KO) [BR:
bpus00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00040 Pentose and glucuronate interconversions
UP12_18040
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
UP12_18040
Enzymes [BR:
bpus01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.2 Acting on polysaccharides
4.2.2.2 pectate lyase
UP12_18040
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GFIT
Motif
Pfam:
Pectate_lyase_4
Motif
Other DBs
NCBI-ProteinID:
AMM99533
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Position
3551845..3552882
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AA seq
345 aa
AA seq
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MLTLKKKVPMLAGVLAVGLVTSLFAPNGEAKAAAKYPESPSIMANFNQQGFSTLNGGTTG
GEGGKTVTVKTGNELLAALKSKGTNEKLKIVVDGTITPSNTSANKIDVKDTNNVSIVGKG
TKGEFNGIGIKVWRANNIIIRNLKIHHSNIGDKDAIGIEGASKNVWVDHNELYNTLNSGK
DDYDGLFDVKNDSDYITFSWNYVHDSWKTMLMGSSDNDNYNRKITFHNNRFENLNSRVPS
MRFGEGHVYNNYYKGIHTTAINSRMGAKMRIEHNVFENTKNAIGSWDSSRVGTWHVINNS
YINSSGSLPTSSTGTYNPPYNYSLLNVNNVKSEVVSNAGVGKVNP
NT seq
1038 nt
NT seq
+upstream
nt +downstream
nt
atgttgactttgaagaaaaaagttccaatgttagctggtgtgttagcggttggtctcgtg
acttcattatttgcaccaaatggggaggcaaaagcggcagcaaagtatcccgaaagccct
tctattatggccaattttaatcaacaaggattctccacattaaatggcggtacaacaggc
ggtgaaggcggtaaaaccgtcacagtcaaaactggaaatgaactattggctgccctcaaa
agtaaaggaacaaacgaaaaattaaaaattgttgtcgacgggacgataaccccttctaat
acatctgccaataaaatcgatgtgaaagatacaaacaatgtctcgatcgtcggcaaaggc
acgaaaggtgaatttaatggaattggcattaaagtatggcgtgccaataacatcatcatc
cgcaacctgaaaatccatcacagcaacatcggtgacaaggatgccatcggaatcgaaggc
gcttctaaaaacgtatgggtcgatcataatgaattgtacaatacattaaactctggtaaa
gatgattatgatggattatttgatgtgaaaaatgactccgactatattaccttctcatgg
aactatgttcatgacagctggaaaacgatgctcatgggcagctctgataacgacaactac
aaccgaaaaatcacattccacaacaaccgttttgaaaacttgaattctcgtgtaccatct
atgcgctttggggaaggtcatgtgtataacaactactataaaggtatccatacaactgcg
attaactctcgtatgggcgcaaaaatgagaattgagcacaacgtatttgaaaatacaaaa
aatgcgatcggcagctgggacagcagtcgagtcggtacatggcatgtcatcaacaactca
tatattaacagctcaggcagtctgccaacgtcttctacaggtacgtacaaccctccttat
aactactctttgcttaacgtgaacaatgtcaaatcagaagtggtatcaaatgctggtgtc
ggaaaagtaaacccttaa
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