Paraburkholderia phenoliruptrix: BUPH_03443
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Entry
BUPH_03443 CDS
T02300
Name
(GenBank) D-alanyl-D-alanine carboxypeptidase
KO
K07259
serine-type D-Ala-D-Ala carboxypeptidase/endopeptidase (penicillin-binding protein 4) [EC:
3.4.16.4
3.4.21.-]
Organism
bpx
Paraburkholderia phenoliruptrix
Pathway
bpx00550
Peptidoglycan biosynthesis
bpx01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
bpx00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00550 Peptidoglycan biosynthesis
BUPH_03443
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
bpx01002
]
BUPH_03443
01011 Peptidoglycan biosynthesis and degradation proteins [BR:
bpx01011
]
BUPH_03443
Enzymes [BR:
bpx01000
]
3. Hydrolases
3.4 Acting on peptide bonds (peptidases)
3.4.16 Serine-type carboxypeptidases
3.4.16.4 serine-type D-Ala-D-Ala carboxypeptidase
BUPH_03443
Peptidases and inhibitors [BR:
bpx01002
]
Serine peptidases
Family S13: D-Ala-D-Ala peptidase C family
BUPH_03443
Peptidoglycan biosynthesis and degradation proteins [BR:
bpx01011
]
Peptidoglycan biosynthesis and degradation
DD-Carboxypeptidase/DD-Endopeptidase (Low molecular weight PBP)
BUPH_03443
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Peptidase_S13
LSDAT_prok
Motif
Other DBs
NCBI-ProteinID:
AFT87014
UniProt:
K0DUQ4
LinkDB
All DBs
Position
1:3443752..3445452
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AA seq
566 aa
AA seq
DB search
MTHAFLSSVARRLRHAAQRSRFTSAVIASSTDAGIPALSPRRRAPRANAWLLVGAALAGA
ASLPLAAEARGRTTHPSVNVSTVLPQSVMTGLQRAHVPLSSISVVVEKVGDRTPIIALNA
AKPMMPASTMKLVTTYAGLSILGPDYRWRTSAYADGTLDANGVLHGNLYIQGTGDPKLVP
EELIDLVEKIHKAGIRGLDGALVLDKRYFDPSTRDLPAFDDDVTAPYNVGPDPLLYAFKS
LSFTLTPASDGTIAIEVLPALAQLQIDNQLRAVNGPCRGEAASVSPTVTPTPNGTVVASF
AGDYSVRCGPRTVNVAVLDHSAFFAGGFLALWQQTGGTFNGTTREGAVPVGAKLVATHQG
PLLADIVRDINKFSNNTMARNLFLSIGAAEEKPPATPAKSARAIEAFLRRDSIEMQYLSL
DNGSGLSRDEHLTALSLADLLQRANASPVAQVFVQSLPIAGVDGTMRNRLTNQGAGGNAQ
IKTGTLRDVRAIAGYVASADGNSYVVVSFINDPHSEAARAAHDALLEWVYQGPTAGFSRV
SAPAAEPASATPRGKPRKNPRRHDAH
NT seq
1701 nt
NT seq
+upstream
nt +downstream
nt
atgacgcacgctttcctgtcttccgtcgcacgccgtctccgtcacgcggcgcagcgttcg
cgcttcacttccgctgtcatcgcttcctcaaccgacgctggtattccggcgctgtcgccg
cgccgccgcgcgccgcgcgcgaacgcatggctgctcgtgggcgccgcgctcgccggcgcc
gcgtcgctgccgctggccgccgaggcgcgcggccggaccacgcatccgagtgtcaacgtc
agcaccgtgctgccgcagtcggtcatgaccggcttgcagcgcgcgcacgtgcccttgtcg
tcgatcagcgtggtcgtcgagaaagtcggcgaccgcacgccgatcattgcgttgaacgcc
gccaagccgatgatgcccgcgtcgacgatgaagctcgtcaccacctacgcgggcctctcg
attctcggtccggactaccgctggcgcacgagcgcctatgccgacggcacgctcgacgcc
aacggcgtgctgcacggcaatctgtacattcagggcaccggcgacccgaagctcgtgccc
gaggaactgatcgacctcgtggagaagatccacaaggcgggcattcgcggcctggacggc
gcgctggtgctcgacaagcgctacttcgacccgtcgacgcgcgacctgcccgccttcgac
gacgacgtcaccgcgccgtacaacgtcggccccgatccgctgctgtacgcgttcaagtcg
ctgtcgttcacgctgacgcctgcatcggacggcaccattgcaatcgaggtgctgcccgcc
ctcgcgcaactgcagatcgacaatcagctgcgcgcggtcaacggcccttgccgcggcgaa
gcggcgtccgtctcgcccaccgtgacgcccacgccgaacggcacggtcgtcgcctccttc
gcgggcgactactcggtgcgctgcggcccgcgcacggtcaacgtggcggtgctcgatcac
tcggcattttttgcgggcggctttctcgcgctgtggcagcagaccggcggcaccttcaac
ggcacgacgcgcgaaggcgccgtgccggtcggcgcgaaactggtggccacgcatcagggg
ccgctgctggcggacatcgttcgcgacatcaacaagttcagcaacaacacgatggcgcgc
aacctgttcctgtcgatcggcgcggccgaagagaagccgcccgcgacgcccgccaaatcg
gcccgcgcgatcgaggcgttcttgcgccgcgacagcatcgagatgcaatacctgtcgctc
gacaacggctcggggctttcgcgcgacgagcatctcacggcgctctcgctcgccgatctg
ctgcagcgggccaacgcaagcccggtcgcccaggtgttcgtgcagtcgctgccgattgcg
ggcgtcgacggcaccatgcgcaaccggctcaccaaccagggcgcgggcggcaacgcgcag
atcaagaccggcacgctgcgcgacgtgcgggccatcgcgggctacgtggcatccgcggac
ggcaacagctatgtcgtggtgagcttcatcaacgatccgcattcggaagccgcgcgcgcc
gcgcacgacgcgctgctcgaatgggtctatcaaggaccgaccgcgggcttcagccgggta
tccgcgcccgcggccgaaccggcaagcgcgacgccgcgcggcaaaccgaggaaaaacccg
cgcaggcacgacgcccattga
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