Paraburkholderia phytofirmans PsJN: Bphyt_0349
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Entry
Bphyt_0349 CDS
T00765
Name
(GenBank) Diaminopimelate epimerase
KO
K01778
diaminopimelate epimerase [EC:
5.1.1.7
]
Organism
bpy
Paraburkholderia phytofirmans PsJN
Pathway
bpy00300
Lysine biosynthesis
bpy00470
D-Amino acid metabolism
bpy01100
Metabolic pathways
bpy01110
Biosynthesis of secondary metabolites
bpy01120
Microbial metabolism in diverse environments
bpy01230
Biosynthesis of amino acids
Module
bpy_M00016
Lysine biosynthesis, succinyl-DAP pathway, aspartate => lysine
Brite
KEGG Orthology (KO) [BR:
bpy00001
]
09100 Metabolism
09105 Amino acid metabolism
00300 Lysine biosynthesis
Bphyt_0349
09106 Metabolism of other amino acids
00470 D-Amino acid metabolism
Bphyt_0349
Enzymes [BR:
bpy01000
]
5. Isomerases
5.1 Racemases and epimerases
5.1.1 Acting on amino acids and derivatives
5.1.1.7 diaminopimelate epimerase
Bphyt_0349
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Motif
Pfam:
DAP_epimerase
PhzC-PhzF
MreB_Mbl
CitF
Motif
Other DBs
NCBI-ProteinID:
ACD14774
UniProt:
B2T1P5
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Position
1:complement(377915..378814)
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AA seq
299 aa
AA seq
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MKLKFTKMHGAGNDFVVLDGYTQPVNLTPAQVRALADRHFGVGADQLLLVEKPTVAGVDF
RYRIFNCDGGEVEHCGNGARCFVKFVRDSGLTDQRSVRVQVQKGTITLTMQENGEVLVDM
GTPVFDPERVPFATKGLQGRGEGADTLWPLDVNGTTRWISVVSMGNPHAVQVVDDVEAFP
VLVEGPVIERHARFPQRVNAGFMQIVGRSEIKLRVYERGAGETLACGTGACAAVAAGIRR
GLLDAPVLVHTHGGKLTITWDAAQADQPLLMAGPAATVFEGEIELPDSLADSLANSQAA
NT seq
900 nt
NT seq
+upstream
nt +downstream
nt
atgaaactgaaattcaccaaaatgcacggtgcgggcaacgacttcgtcgtgctcgacggc
tacacccaaccggtcaacctgacgccggcgcaggtgcgcgcgctcgcggaccggcatttc
ggcgtcggtgccgatcagttgctgctggtcgagaagcccacggtggccggcgtcgatttc
agatatcgcatcttcaattgcgacggcggcgaagtcgagcattgcggcaacggcgcgcgc
tgcttcgtcaagttcgtgcgtgacagtggcctcaccgatcagcgcagcgtgcgcgtgcag
gtgcaaaagggcaccatcacgctgaccatgcaggaaaacggcgaagtgctggtcgacatg
ggcacgcccgtgttcgacccggaacgcgtgccgttcgccaccaaaggtctgcaaggccgc
ggcgagggcgcggacacgctctggccgctcgacgtgaacggcacgacgcgctggatttcg
gtggtgtcgatgggcaatccgcacgccgtgcaagtggtcgacgacgtcgaggcgttcccg
gtgctggttgaaggcccggtgatcgaacgtcatgcgcgttttccgcagcgggtgaacgcg
ggcttcatgcagatcgtcggccgtagcgagatcaagctgcgcgtgtacgaacgcggcgcg
ggggaaacgctggcgtgcggcacgggcgcgtgtgcggcggttgcggccggcatccggcgc
gggctgctggacgcaccggtgctcgtccacacgcatggcggcaaactgaccatcacgtgg
gacgccgcgcaagcagaccagccgctgctcatggccggccctgccgcgacggttttcgaa
ggcgaaatcgaactgcccgactcattggccgactcgttggccaattcacaggccgcataa
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