Paraburkholderia phytofirmans PsJN: Bphyt_3340
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Entry
Bphyt_3340 CDS
T00765
Name
(GenBank) transcriptional regulator, Fis family
KO
K03557
Fis family transcriptional regulator, factor for inversion stimulation protein
Organism
bpy
Paraburkholderia phytofirmans PsJN
Brite
KEGG Orthology (KO) [BR:
bpy00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
bpy03000
]
Bphyt_3340
03036 Chromosome and associated proteins [BR:
bpy03036
]
Bphyt_3340
03400 DNA repair and recombination proteins [BR:
bpy03400
]
Bphyt_3340
Transcription factors [BR:
bpy03000
]
Prokaryotic type
Helix-turn-helix
Other families
Bphyt_3340
Chromosome and associated proteins [BR:
bpy03036
]
Prokaryotic type
Nucleoid associated proteins
Other nucleoid associated proteins
Bphyt_3340
DNA repair and recombination proteins [BR:
bpy03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Facilitator
Bphyt_3340
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HTH_8
HTH_30
HTH_17
Xre-like-HTH
NUMOD1
Phage_NinH
DUF2406
Motif
Other DBs
NCBI-ProteinID:
ACD17731
UniProt:
B2SYJ6
LinkDB
All DBs
Position
1:3760688..3760921
Genome browser
AA seq
77 aa
AA seq
DB search
MSKNNIEQSVRDSLGMYFQDLDGSNPHDVYDMVISCVEKPLLEVVLEQAGGNQSLAAEYL
GINRNTLRKKLQQHGLL
NT seq
234 nt
NT seq
+upstream
nt +downstream
nt
atgagcaagaacaatatcgaacaatctgtccgcgacagcctgggaatgtatttccaggat
ctcgacggctcgaatccgcacgacgtctacgacatggtgatttcctgcgtagaaaaacct
ctgctcgaagtggtgctcgagcaggccggcggcaaccagtcgctggccgccgagtatctc
ggcatcaaccgcaatacgctgcgcaagaaactgcaacagcacggtttgctgtag
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integrated database retrieval system
