Burkholderia pyrrocinia: ABD05_11005
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Entry
ABD05_11005 CDS
T03962
Name
(GenBank) oligoribonuclease
KO
K13288
oligoribonuclease [EC:3.1.-.-]
Organism
bpyr
Burkholderia pyrrocinia
Brite
KEGG Orthology (KO) [BR:
bpyr00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
bpyr03019
]
ABD05_11005
03009 Ribosome biogenesis [BR:
bpyr03009
]
ABD05_11005
Messenger RNA biogenesis [BR:
bpyr03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Ribonucreases
ABD05_11005
Ribosome biogenesis [BR:
bpyr03009
]
Eukaryotic type
Pre-60S particles
RNases
ABD05_11005
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
RNase_T
Rv2179c-like
Motif
Other DBs
NCBI-ProteinID:
AKM00690
UniProt:
A0A0G3WT78
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All DBs
Position
1:2384100..2384726
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AA seq
208 aa
AA seq
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MTDTAASASQPALVRNELNLVWLDMEMTGLDPDNDRIIEIAVVVTNSTLDVAVEGPVFAI
HQSDETLAKMDDWNKSTHGRSGLIDRVRASTVTEAEAAAQLQAFLAQYVSPGKSPMCGNS
ICQDRRFMARWMPEFEKFFHYRNLDVSTLKELCRRWQPAIYKGFQKRAMHTALADIHESI
DELKYYREHFLIPAASASASAGESAPAA
NT seq
627 nt
NT seq
+upstream
nt +downstream
nt
atgaccgataccgccgcttccgccagccagcccgcgctcgtgcgcaacgagttgaacctc
gtctggctcgacatggagatgacgggcctcgacccggataacgaccgcatcatcgagatc
gcggtcgtcgtgaccaattccacgctcgacgttgccgtcgaaggccccgtgttcgcaatc
caccagagcgacgaaacgctcgcgaaaatggacgactggaacaagtcgacgcacggccgc
tcgggcctgatcgaccgcgtgcgcgcgtcgaccgtgaccgaggcggaagcggccgcacaa
ctgcaggcgttcctcgcgcagtacgtgtcgcccggcaagtcgccgatgtgcggcaactcg
atctgccaggaccgccgtttcatggcgcgctggatgccggaattcgagaaattcttccac
taccgcaatctcgacgtcagcacgctgaaggagctgtgccgccgctggcagcccgcgatc
tacaagggcttccagaagcgcgcgatgcacacggcactcgcggacatccacgagtcgatc
gacgagctgaagtactaccgcgagcatttcctgattccggccgcatcggcgtcggcgtcg
gcaggcgagtccgcgccggccgcctga
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