KEGG   Burkholderia pyrrocinia: ABD05_33050
Entry
ABD05_33050       CDS       T03962                                 
Name
(GenBank) DEAD/DEAH box helicase
  KO
K11927  ATP-dependent RNA helicase RhlE [EC:3.6.4.13]
Organism
bpyr  Burkholderia pyrrocinia
Pathway
bpyr03018  RNA degradation
Brite
KEGG Orthology (KO) [BR:bpyr00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   03018 RNA degradation
    ABD05_33050
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:bpyr03019]
    ABD05_33050
Messenger RNA biogenesis [BR:bpyr03019]
 Prokaryotic type
  Bacterial mRNA degradation factors
   RNA degradosome components
    Helicases
     ABD05_33050
SSDB
Motif
Pfam: DEAD Helicase_C ResIII AAA_25 AAA_22
Other DBs
NCBI-ProteinID: AKM05032
UniProt: A0A0G3X283
LinkDB
Position
3:complement(656010..657455)
AA seq 481 aa
MSFASLGLIDPLLRNVQDRNYQTPTPVQAKAIPAVLSGKDVMAAAQTGTGKTAGFALPLL
QRLVQHGPAVSSNRVRVLVLVPTRELAEQVLQSFVDYGKGLDLRFLAAYGGVSINPQMMK
LRKGVDVLVATPGRLLDLNRQNAVQFDQVQTLVLDEADRMLDLGFARELNAVFAALPTQR
QTLLFSATFTDDIRTMAAGILRGPVNISVSPPNVTASKIKQWVVTVDKRNKPDLFMHLVA
ENNWEHALVFVKTRKGVDYLAAMLDEAGYAIDTIHGDKPQPARLRALERFKTGEVNMLVA
TDVAARGLDIDDLPLVINVDLPIVAQDYVHRIGRTGRAGASGVAVSLVCADEAPQLAAIE
ALIRQTLPREEEPGFEAEHRVPETSATGQIVKKPKKPKKPKVPQAASGATQVPGKKPRPQ
GGENKRKPAAQRAVAAGKGAGLSSGNPFGVQKPRSKPAGKSAAGSRKPAGKPAGGRGKRQ
P
NT seq 1446 nt   +upstreamnt  +downstreamnt
atgtcttttgcctcgcttggcctgatcgatcccctgctgcgtaatgtgcaggaccgcaat
taccagacacccacgccggtgcaggccaaggcgattcctgcagtgctcagcggcaaggac
gtcatggccgcggcacagaccggcaccggcaagacggcgggtttcgcgcttcccctgttg
cagcggctggtgcaacacgggccggcggtgtccagcaaccgcgtgcgcgttctggtgctg
gtgcccacgcgtgagctggctgaacaggtgctgcaaagctttgtcgattacggcaaaggc
ctcgacttgcgatttctggccgcctacggcggtgtgagcatcaacccgcagatgatgaag
ttgcgcaagggcgtggatgtgctcgttgccacgccgggccgtttgctggatctcaatcgc
cagaacgcagtgcagttcgatcaggtacaaacgctggtgctggatgaagccgaccgcatg
ctggatctcggctttgcgcgcgaactcaatgctgtctttgctgcgttgcccacccagcgc
cagactctgctgttctccgccacgtttaccgacgatatccgcacgatggcggcgggcatt
ctgcgcggcccggtcaatatcagcgtcagcccgcccaatgtcacggccagcaagatcaag
cagtgggtggtgacggtggataaaaggaacaagcccgacctcttcatgcacctcgtggcc
gagaacaactgggagcacgcgctggtgttcgtcaaaacccgcaaaggcgtggattacctg
gcggccatgctggatgaagcgggctatgcgatcgacaccatccacggcgacaaaccgcaa
cccgcgcgcctgcgtgcgctggagcgcttcaagacgggcgaagtcaatatgctggtcgcc
accgatgtggctgcgcgcgggctggatatcgacgatctgccgctggtgatcaacgtcgat
ctgccgatcgtggcgcaagactatgtgcaccgtatcggccgtaccggccgcgcgggcgcc
agcggcgtggcggtgtccctcgtgtgtgccgacgaagcgccgcaactggccgcgatcgaa
gcgctgatccggcaaacgctgccccgtgaagaagagccgggttttgaagccgaacaccgc
gtgccggaaaccagcgcaacgggccagatcgtcaagaagcccaaaaagccgaagaagccc
aaagtgccgcaagctgcgtcgggcgccacgcaggtgcccggcaaaaagccgcgcccgcaa
ggcggcgaaaacaaacgcaagcctgcggcgcagcgcgcagtagccgcaggtaaaggcgca
ggtttgtccagcggtaacccattcggcgtgcagaagccacgcagcaaacccgccggcaag
tcggccgcgggttcacgcaagccggctggcaagcccgctggtggccgcggcaaacgtcag
ccctga

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