Bacillus velezensis YAU B9601-Y2: MUS_1228
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Entry
MUS_1228 CDS
T02108
Symbol
pcrA1
Name
(GenBank) ATP-dependent DNA helicase
KO
K03657
ATP-dependent DNA helicase UvrD/PcrA [EC:
5.6.2.4
]
Organism
bqy
Bacillus velezensis YAU B9601-Y2
Pathway
bqy03420
Nucleotide excision repair
bqy03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
bqy00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
MUS_1228 (pcrA1)
03430 Mismatch repair
MUS_1228 (pcrA1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
bqy03400
]
MUS_1228 (pcrA1)
Enzymes [BR:
bqy01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
MUS_1228 (pcrA1)
DNA repair and recombination proteins [BR:
bqy03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
MUS_1228 (pcrA1)
MMR (mismatch excision repair)
Other MMR factors
MUS_1228 (pcrA1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C
AAA_19
UvrD_C_2
Viral_helicase1
AAA_30
DEAD
ResIII
AAA_11
Motif
Other DBs
NCBI-ProteinID:
AFJ61255
UniProt:
I2C3N1
LinkDB
All DBs
Position
complement(1145683..1147839)
Genome browser
AA seq
718 aa
AA seq
DB search
MRLSILEQPAFYHRQKGDFTACEKACAAEEPQAEKEKEEYKKAGMFRLPKGKAISENPKP
IVSEWKSPKKVPAAEPFSPTSEAADTSLFPGIGLNREQMKAVTETDGPLLVLAGAGSGKT
RVLTARAAHMIEHLGISPENMLLVTFTTKAVAEMKERMANEYGLAAGKVSRLVTGTFHSF
FYKILYHYDSSKWNGSQLLKMEWQKEQYVKKALYEENLDEKEFPVDQALQLIGCWKNTYL
PHETIPLADDWEKKVYRLYEHYERQKREKRQFDFDDMAQGCYELFQSRPDILAQYQNRFS
HILIDEFQDINPVQYNIMQMIASPENNLCCVGDDDQSIYAFRGSSPSFILDFQKDYPAAK
TIYLTANYRSPHPIVSSAHAVVKKNKKRYEKTLSAVKDGVHNPVIFYPYDEEEEATMIVS
DMKEKIQNGASPDDFAVLYRTNSAGRAIYERLHQSSIPYHADRGVQTFYSRRIVRQILAY
LYASQNEDDPDAVKDLLPALFLKQSALQTLKALSITEDCTMVKALTKLPDLKPFQIGKIK
QIVPFFASIRTMKPVEAITFAESKMGFSEYLKKRGNEGNKLEKGSDDLRDVKVAAKKFKT
IPDFLAHVDHMRAAENLKTDENGVELLTIHRSKGLEFNTVYILGAADGSIPHDFALETAR
QGDPAPLEEERRLLYVAMTRAMQHLYVSCPAYRRGKTARSSRFLEPLLRTDRRSALRI
NT seq
2157 nt
NT seq
+upstream
nt +downstream
nt
atgcggctttcgattttagagcagccggcattttatcaccggcaaaagggagacttcacc
gcctgtgaaaaagcatgcgcggccgaggaaccgcaagcggagaaagaaaaagaagagtat
aagaaagccggcatgttccgcctgccgaaaggaaaagcgatttcagagaatccgaaaccg
atcgtctcagaatggaaaagcccgaaaaaagtgcctgcggccgaaccgttttcaccaaca
tccgaggcggctgatacatctttgttccccggcatcggcctgaaccgtgaacagatgaag
gcagttactgaaacggacggacctttgttagtgcttgccggagcgggaagcggaaaaaca
agggtgctgacagcacgcgccgcccatatgattgaacacctcggcatttcacctgagaat
atgctgcttgtgacctttacgacaaaagccgtcgccgaaatgaaagagcggatggcgaat
gagtacggtctggcagccggaaaagtctcccgtctcgtgaccggaacattccacagcttt
ttctataaaatactctatcactatgattcttcaaaatggaacggcagccagcttttaaaa
atggagtggcaaaaagagcaatatgtgaaaaaggcgctctatgaagaaaatttggatgaa
aaagagtttcccgtcgaccaggcgcttcagcttatcggctgctggaaaaacacatatctc
ccccatgagaccattccgcttgcggacgactgggagaaaaaagtgtacaggctctacgaa
cattacgaacggcaaaagcgggaaaaacggcaatttgattttgatgacatggcccaaggc
tgttatgaactgtttcaaagccggcctgatattctcgcacagtaccaaaacagattttct
catattttgattgatgagtttcaagatatcaatcctgtccagtacaacattatgcaaatg
atcgcaagccctgagaataacctgtgctgcgtgggtgatgacgaccaatccatttatgcg
ttccgcggcagcagcccgtctttcattttagattttcaaaaggattatccggctgcaaag
accatttacttaacggcaaattaccgatcgccgcatccgatcgtctcaagcgctcatgcc
gtcgtaaagaaaaataaaaaacggtatgaaaaaacactttctgccgtcaaagacggcgtt
cacaatcccgtgatattttatccttacgatgaagaagaagaagcgaccatgatcgtttcg
gatatgaaagagaagattcaaaacggggcgagtcctgacgactttgccgtgctttaccgg
acaaacagcgccggacgggccatttatgaaagactgcatcaatcatcgattccttatcat
gccgaccggggcgtgcagacgttctacagccgcagaatcgtacgccagatcctcgcctac
ttatatgcgagtcagaatgaagatgatccggatgcggtgaaagacctgctgcccgcctta
tttttaaagcaatccgccctgcaaacgttaaaggcgctgtcaatcacggaagattgcacg
atggttaaggcactgacgaaactgcctgacctgaagccttttcaaatagggaagatcaag
cagatcgttccgtttttcgcaagcatccggacaatgaagccggttgaagccatcaccttt
gcagaaagcaaaatgggtttttccgagtatttaaaaaaacggggcaatgaggggaacaaa
ctggaaaaaggctctgatgatctcagggatgtcaaagtggccgccaaaaaattcaaaacg
attcccgattttcttgcgcatgtcgatcatatgcgcgccgctgagaatctgaaaaccgat
gaaaacggcgtcgaactgctgaccattcaccgctctaaaggtcttgaattcaatacggtc
tatattttaggcgcggctgacggctcgatcccccatgacttcgcgcttgagacggcgaga
cagggcgatcccgctccgctcgaagaagaaagacggcttctgtatgtcgcaatgacaagg
gccatgcagcatttatatgtatcttgtcccgcgtacaggcggggaaaaacagcgcgcagc
tcaagatttctcgagccccttcttcggacggacagacggagcgcactcaggatataa
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