Bradyrhizobium sp. ORS 278: BRADO3999
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Entry
BRADO3999 CDS
T00516
Symbol
gyrA
Name
(GenBank) DNA gyrase, subunit A, type II topoisomerase
KO
K02469
DNA gyrase subunit A [EC:
5.6.2.2
]
Organism
bra
Bradyrhizobium sp. ORS 278
Brite
KEGG Orthology (KO) [BR:
bra00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
bra03032
]
BRADO3999 (gyrA)
03400 DNA repair and recombination proteins [BR:
bra03400
]
BRADO3999 (gyrA)
Enzymes [BR:
bra01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.2 DNA topoisomerase (ATP-hydrolysing)
BRADO3999 (gyrA)
DNA replication proteins [BR:
bra03032
]
Prokaryotic type
DNA Topoisomerases
BRADO3999 (gyrA)
DNA repair and recombination proteins [BR:
bra03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Facilitator
BRADO3999 (gyrA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_topoisoIV
DNA_gyraseA_C
SIS
Motif
Other DBs
NCBI-ProteinID:
CAL77751
RhizoBase:
BRADO3999
UniProt:
A4YV25
LinkDB
All DBs
Position
complement(4188507..4191257)
Genome browser
AA seq
916 aa
AA seq
DB search
MSDKEDEKPGEPGGPSDIRPVSILDEMKRSYLDYAMSVIVARALPDARDGLKPVHRRILY
GMYENGFEWNKPYRKSARTVGDVIGKYHPHGDQSVYGALVRMAQDFSMRVPLIDGQGNFG
SVDGDMPAAMRYTESRLTKIAQSLLDDLDKDTVDFQPNYDSSEKEPSVLPAKFPNLLVNG
AGGIAVGMATNIPPHNLGEVIDACIALTDNPALSIDELNQIIPGPDFPTGGIILGRAGIR
SAYHTGRGSIVMRGKVTIDTIRKDREAILITEIPYQVNKASMVERIAELVREKKIEGISD
LRDESDRDGFRVVVELKRDAVPDVVLNQLYKFTPLQTNFGANMVALDGGRPQTMNLKDLL
QVFVAFREQVVTRRTKFLLNKARDRAHILVGLAIAVANIDEIIRVIRTSPDPNTARETLM
SRDWPAQDVAAMITLIDDPRHRINPDGTARLSLEQAKAILDLRLQRLTALGREEISDELD
KLAVEIADYLDILRSRARVQDIVKTELSAIKAEFATPRRTVIAEQEGEMEDEDLIQREDM
VVTVSHAGYTKRVPLSAYRAQRRGGKGRTGMQTREEDFVSRLFVASTHTPVLFFSSRGQV
YKEKVWRLPIAAPNGRGKALINILPLEQGERITTIMPLPEDESSWANLDVMFATTGGNVR
RNKLSDFVDVRRSGIIAMKLDEGEEIVNVQICTERDDVLLTAAGGQCIRFPVTDVRVFTG
RTSMGVRGIALAEGDKLISLTILRHVETTSDERTAYLKMRRAMSGETAAEEPVETEGEEA
AAGAIQLSQERYVEMSAQEQVVLTVSVNGYGKRTSSYEYRTTGRGGKGIVAMSVNNRNGK
LVASFPVEDSDQIMLVTDKGQLIRCPVDGIRIAGRSTQGVIVFNTADDEHVVSVEHIGEE
AENGNGANGTEGANGE
NT seq
2751 nt
NT seq
+upstream
nt +downstream
nt
ttgtccgataaagaagatgagaagcccggagagccgggcggaccttccgacattcgtccc
gtctccatcctcgatgagatgaaacgctcctacctcgattacgcgatgagcgtgatcgtg
gcgcgggcgctgcccgatgcgcgcgacggcctgaagccggtgcaccggcgcatcctctac
ggcatgtatgagaacggcttcgagtggaacaagccgtaccgcaagtcggcccgcaccgtc
ggcgacgtcatcggtaaatatcatccgcacggcgaccagtcggtctatggcgcgctggtc
cgcatggcgcaggacttctcgatgcgcgtgccgctgatcgacggccagggcaatttcggc
tcggtcgacggcgacatgccggcggcgatgcgctacacggaatcccgcctgaccaagatc
gcgcagtcgctgctcgacgatctcgacaaggacaccgtcgacttccagccgaactacgac
agctccgaaaaggagccgtcggtgctgccggcgaagtttccgaacctgctcgtcaacggc
gccggcggcatcgccgtgggcatggcgaccaacattccgccgcacaatctcggcgaggtc
atcgacgcctgcatcgcgctgaccgacaatccggcgctgtcgatcgacgagctcaaccag
atcattccggggccggacttcccgaccggcggcatcatcctcggccgcgccggcatccgc
tcggcctaccacaccggccgcggctcgatcgtgatgcgcggcaaggtgacgatcgacacc
atccgcaaggaccgcgaggcgatcctgatcacggagatcccgtatcaggtcaacaaggcc
tcgatggtcgagcgcatcgccgaattggtgcgcgagaagaagatcgagggcatctccgac
ctgcgcgacgaatccgaccgcgacggtttccgcgtggtcgtcgagctcaagcgcgacgcc
gtgccggacgtggtgctgaaccagctctacaagttcacgccgctgcagaccaatttcggc
gccaacatggtggcgctggatggtggtcgtccgcagaccatgaacctcaaggatctgctg
caagtgttcgtggccttccgcgaacaggtggtgacgcggcggaccaagttcctgctcaac
aaggcacgtgaccgcgcccacatcctggtcggcctcgcgatcgcggtcgccaacatcgac
gagatcatccgcgtcatccggacctcgcccgatccgaacacggcgcgcgaaaccctgatg
tcgcgcgactggccggcacaggacgtcgcggcgatgatcaccttgatcgacgatccgcgc
caccgcatcaatccggacggcaccgcgcggctgtcgctcgagcaggccaaggccattctc
gacctgcgcctgcagcgtctcactgcgctgggccgcgaggagatctccgacgaactcgac
aagctcgcggtcgagatcgccgactatctcgacatcctgcgctcgcgcgcgcgggtgcag
gacatcgtcaagaccgagctgtcggccatcaaggccgagttcgccactccacgccgcacc
gtcatcgccgagcaggaaggcgagatggaggacgaggacctgatccagcgtgaggacatg
gtcgtgaccgtgtcgcatgccggctacaccaagcgtgtgccgctgtcggcctatcgcgcg
cagcgccgcggcggcaagggccgcacgggcatgcagacgcgcgaggaggatttcgtcagc
cggctgttcgtggcctcgacgcatacgccggtgctgttcttctcgtcgcgcggccaggtc
tacaaggagaaggtctggcggctgccgatcgcagcccccaacggccgcggcaaggcgctg
atcaacatcctgccgctggagcagggcgagcgcatcaccacgatcatgccgctgccggag
gatgaatcctcctgggcgaatctcgacgtgatgttcgccacgaccggcggcaacgtccgg
cgcaacaagctgtcggatttcgtcgacgtccgccgctccggcatcatcgcgatgaagctc
gacgagggcgaggagatcgtcaacgtccagatctgcaccgagcgtgacgacgtgctgctg
accgccgccggcggccagtgcatccgcttccccgtcaccgacgtgcgcgtgttcacgggc
cgcacctcgatgggcgtgcgcggcatcgcgctcgccgaaggcgacaagctgatctcgctg
acgatcctgcgccatgtcgagaccacgtcggacgagcggaccgcgtatctgaagatgcgc
cgggcgatgtcgggtgaaacggcggccgaggagccggtcgaaaccgagggcgaggaggcg
gcggcgggcgcgatccagctgtcgcaggagcgctatgtcgagatgtcggcgcaggagcag
gtggtgctgaccgtctcggtcaacggctacggcaagcgcacctcgtcatacgagtaccgc
acgacgggccgcggcggcaaaggcatcgtggcgatgtcggtcaacaaccgcaacggcaag
ctggtcgcctcattcccggtcgaggacagcgaccagatcatgctggtgaccgacaagggg
cagctgatccgctgccccgtcgacggcatccgcatcgccggccgctccactcagggcgtg
atcgtgttcaacaccgccgacgatgagcacgtcgtctcggtcgagcacatcggcgaggag
gcggagaacggcaatggcgcgaatgggactgagggcgcgaacggcgaatga
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