Bradyrhizobium sp. ORS 278: BRADO5656
Help
Entry
BRADO5656 CDS
T00516
Symbol
ddlB
Name
(GenBank) D-alanine-D-alanine ligase, affects cell division
KO
K01921
D-alanine-D-alanine ligase [EC:
6.3.2.4
]
Organism
bra
Bradyrhizobium sp. ORS 278
Pathway
bra00470
D-Amino acid metabolism
bra00550
Peptidoglycan biosynthesis
bra01100
Metabolic pathways
bra01502
Vancomycin resistance
Brite
KEGG Orthology (KO) [BR:
bra00001
]
09100 Metabolism
09106 Metabolism of other amino acids
00470 D-Amino acid metabolism
BRADO5656 (ddlB)
09107 Glycan biosynthesis and metabolism
00550 Peptidoglycan biosynthesis
BRADO5656 (ddlB)
09160 Human Diseases
09175 Drug resistance: antimicrobial
01502 Vancomycin resistance
BRADO5656 (ddlB)
09180 Brite Hierarchies
09181 Protein families: metabolism
01011 Peptidoglycan biosynthesis and degradation proteins [BR:
bra01011
]
BRADO5656 (ddlB)
Enzymes [BR:
bra01000
]
6. Ligases
6.3 Forming carbon-nitrogen bonds
6.3.2 Acid-D-amino-acid ligases (peptide synthases)
6.3.2.4 D-alanine---D-alanine ligase
BRADO5656 (ddlB)
Peptidoglycan biosynthesis and degradation proteins [BR:
bra01011
]
Precursor biosynthesis
Amino acid ligase
BRADO5656 (ddlB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Dala_Dala_lig_C
Dala_Dala_lig_N
ATP-grasp_3
Motif
Other DBs
NCBI-ProteinID:
CAL79326
RhizoBase:
BRADO5656
UniProt:
A4YZK0
LinkDB
All DBs
Position
complement(5848920..5849909)
Genome browser
AA seq
329 aa
AA seq
DB search
MRTTILFGGSNKERLVSVASAKALHAALPEADLWFWEADDTVQQASGPALVAHAKPFEEP
FTADGVRIGTLAEALDRARAEDRILVLGLHGGRAENGELQVMCEMRGVPFTGSSSAASHL
AFDKVAAKRFAVLGGVTAAEGVALDNAETALARYGKLIAKPVKDGSSFGLIFVNAKQDLV
AVKAAAATEEYLIEPFVTGKEATCGVLEQADGSLIALPPIEILPADGAFNYFAKYLAAAT
KEICPGRFNPEVTAALQREAIKAHRALSCGGYSRTDFIVSADGPVYLETNTLPGLTAASL
YPKALAAQGIPFADFLQQQIALAERRVRH
NT seq
990 nt
NT seq
+upstream
nt +downstream
nt
atgcgcaccacgattctgttcggcggctccaacaaggaacgtctcgtctcggtcgccagc
gccaaggcgctgcacgccgcgctgccggaggcggacctctggttctgggaggccgacgac
actgtgcagcaggcaagcggcccagcgctggtcgcccacgcaaagccgttcgaggagccg
ttcacggccgacggcgtccggatcggcacgctcgccgaggcgctcgatcgtgcccgcgcc
gaggaccggatcctggttctcggacttcatggcggacgggcggagaacggcgagcttcaa
gtgatgtgcgagatgcggggcgtgccgttcaccggctcgagctcggcggcctcgcacctc
gccttcgacaaggtcgccgccaagcgcttcgccgtactcggtggcgtcacggcggccgaa
ggtgtcgcgctcgacaatgccgagacagctctcgcgcgttacggcaagctgatcgccaag
ccggtgaaggatggctcgagcttcggcctgatcttcgtcaacgccaaacaggacctcgtc
gccgttaaggccgccgctgcgaccgaggagtatctcatcgagccgttcgtcaccgggaag
gaggcgacctgcggcgtgctcgagcaggcggacggctcgttgatcgcgctgccgccgatc
gagatcctgccggccgacggcgccttcaactacttcgcgaagtacctggcggccgcgacg
aaggagatctgtccgggacgcttcaatccggaggttacggcagcgctgcagcgagaggcg
atcaaggcgcatcgtgcgctgtcctgcggcggctactcgcgcaccgacttcatcgtctcg
gccgacggcccggtctatctcgagaccaacacgctgcccggcttgaccgccgcctcgcta
tatccgaaggcgctcgcggcgcagggtatcccctttgccgactttctgcagcagcagatc
gccttggcggaacgccgcgttcggcactga
DBGET
integrated database retrieval system
