Brenneria rubrifaciens: EH207_16180
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Entry
EH207_16180 CDS
T05976
Symbol
rho
Name
(GenBank) transcription termination factor Rho
KO
K03628
transcription termination factor Rho
Organism
brb
Brenneria rubrifaciens
Pathway
brb03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
brb00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
EH207_16180 (rho)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
brb03021
]
EH207_16180 (rho)
03019 Messenger RNA biogenesis [BR:
brb03019
]
EH207_16180 (rho)
Transcription machinery [BR:
brb03021
]
Prokaryotic type
Bacterial type
Other transcription-related factors
Transcription termination factor
EH207_16180 (rho)
Messenger RNA biogenesis [BR:
brb03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Other RNA degradosome components
EH207_16180 (rho)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Rho_RNA_bind
ATP-synt_ab
Rho_N
NACHT
OB_RNB
AAA_22
AAA_25
AAA
FtsK_SpoIIIE
Motif
Other DBs
NCBI-ProteinID:
QCR09909
UniProt:
A0A4P8QWL8
LinkDB
All DBs
Position
complement(3623418..3624677)
Genome browser
AA seq
419 aa
AA seq
DB search
MNLTELKNTPVSELITLGENMGLENLARMRKQDIIFAILKQHAKSGEDIFGDGVLEILQD
GFGFLRSADSSYLAGPDDIYVSPSQIRRFNLRTGDTISGKIRPPKEGERYFALLKVNEVN
YDKPENARSKILFENLTPLHANSRLRMERGNGSTEDLTARVLDLAAPIGRGQRGLIVAPP
KAGKTMLLQNIAQSIAYNHPDCVLMVLLIDERPEEVTEMQRLVKGEVVASTFDEPASRHV
QVAEMVIEKAKRLVEHKKDVIILLDSITRLARAYNTVVPASGKVLTGGVDANALHRPKRF
FGAARNVEEGGSLTIIATALVDTGSKMDEVIYEEFKGTGNMELHLARKIAEKRVFPAIDY
NRSGTRKEELLTTSEELQKMWILRKIIHPMGEIDAMEFLINKLAMTKTNDEFFDMMKRS
NT seq
1260 nt
NT seq
+upstream
nt +downstream
nt
atgaatcttaccgaattaaagaatacgccagtttctgagttgattactcttggcgaaaat
atgggactggaaaacctcgctcgcatgcgcaagcaggatattatttttgccattctcaag
caacacgcgaaaagtggcgaggatattttcggcgacggtgtgctggagatattgcaggat
ggcttcggcttcctccgttcagcagacagttcctaccttgccggtcctgatgatatctat
gtttcccccagccaaatccgccgttttaaccttcgtactggtgacaccatttcaggaaaa
attcgcccgccgaaagaaggcgaacgctattttgccctgctgaaagttaacgaagtcaat
tacgacaaaccagaaaacgcccgcagtaaaatcctgtttgaaaaccttactcccctgcac
gcgaattcccgcctgcgtatggagcggggtaatggatccacagaagatttgacggcccgc
gtactggatttggcagcgcctatcggccgcggtcagcgtggtctgatcgtagctccgccg
aaagcgggtaaaacaatgctgctgcaaaacatcgcacaaagcattgcctacaaccatcct
gactgtgtgctgatggtgctgttgattgacgagcgcccggaagaagtgaccgagatgcag
cgtctggtcaaaggagaagtcgttgcttctacctttgatgaaccggcttcccgccatgtt
caggttgccgaaatggtcatcgaaaaagcgaagcgtctggttgaacataaaaaagacgtc
atcattctgctggattccatcacacgtctggcgcgtgcatataacactgtggtgcctgct
tccggtaaagtattgaccggtggtgtggacgccaacgccctgcatcgtccaaaacgcttc
tttggcgccgcccgaaacgttgaagaaggcggtagtttaacgatcattgccaccgcactg
gttgataccggatcgaaaatggacgaagtgatttacgaagagtttaaaggcaccggtaac
atggagctgcatctcgcgcgtaaaattgctgaaaaacgtgtattcccggctatcgattac
aaccggtccggtacgcgtaaagaagaattgcttaccacgtctgaagaacttcagaaaatg
tggattctgcgcaagatcattcacccgatgggtgagattgacgcgatggagttcttgatt
aacaagttggcgatgaccaaaactaacgatgaattcttcgatatgatgaagcgttcgtaa
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