Bradyrhizobium sp. CCGE-LA001: BCCGELA001_29405
Entry
BCCGELA001_29405 CDS
T04273
Gene name
oppD
Definition
(GenBank) oligopeptide transporter ATP-binding component
KO
K02031
peptide/nickel transport system ATP-binding protein
Organism
brc
Bradyrhizobium sp. CCGE-LA001
Pathway
brc02024
Quorum sensing
Brite
KEGG Orthology (KO) [BR:
brc00001
]
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
BCCGELA001_29405 (oppD)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
brc02000
]
BCCGELA001_29405 (oppD)
Transporters [BR:
brc02000
]
ABC transporters, prokaryotic type
Peptide and nickel transporters
Peptides/nickel transporter
BCCGELA001_29405 (oppD)
SSDB
Motif
Pfam:
ABC_tran
oligo_HPY
SMC_N
AAA_21
AAA_22
AAA_7
Other DBs
NCBI-ProteinID:
AMA59962
UniProt:
A0A0X8CSA1
LinkDB
Position
complement(6390236..6391222)
AA seq
328 aa
MEPLLQIADLRVTFDDVPTLRGIDLTLARGESLGMVGESGCGKSVTWLAALGLLTGRANI
TGSVRLAGDELLDATASRLDKVRGGRIAMIFQDPASALNPVHRVGDQIIEVLRLHRGMDQ
RAALAEARRLLDQVGIPDAARRLRAYPHEFSGGQNQRIMIAMALAGQPDILIADEPTTAL
DVSIQAQILELLRQIQRETGMALVLISHDLGVVSEICERVMVLYGGHIVEELPADRLFAR
PAHPYTRGLLAALPSLDGPRQRLFAIPGVVPNAAAFPPGCPFAPRCDRRIGGCRDWAMEL
AALEGDIRHRAACLHVTSEPPAGEVVAA
NT seq
987 nt
+upstream
nt +downstream
nt
atggagccgcttcttcaaatcgcagatttgcgtgtcacgttcgatgatgtgccgacgctg
cgcggaatcgatctcacgctcgcgcgcggcgagtcgctgggcatggtcggggaaagcggt
tgcggtaaatctgtgacatggcttgcggcgctcggactgttgaccggacgcgcgaacata
acgggcagcgtacgcctggccggagacgagctgctcgatgcaacagcctctcggctcgac
aaggtgcggggcgggcggatcgccatgatcttccaggacccggcgagcgcgcttaatccc
gtgcacagggtgggcgatcagatcatagaggtcttgcggctccatcgtggcatggatcag
cgcgcggcgcttgccgaagcccgtcgtctgctcgaccaggtcggcatacccgatgcagcc
cgccggcttcgcgcctatccgcacgaattctccggtggccagaaccagcgcatcatgatc
gccatggcgcttgcaggacagcccgacatcttgatcgccgacgaaccgaccaccgccttg
gatgtcagcattcaagcgcagattcttgagcttctgcggcaaattcagcgcgagacaggc
atggcactggtcctgatctcgcatgatctcggcgtcgtcagcgagatctgtgaacgtgtc
atggtgctttacgggggccacatcgtcgaagaattgcccgctgaccgtctcttcgcgcga
cctgctcacccatatacgagaggtcttcttgcggctcttccaagtctggatgggccccgg
caacgcctcttcgccattcccggtgtcgtgccaaacgcagccgcgtttcccccgggctgt
ccgttcgcccctcgatgcgatcggcggatcggaggctgtcgtgattgggcgatggagctc
gccgcgctggagggcgacatcagacacagggccgcctgcttgcatgtcacgagcgaaccg
cccgcgggcgaggtcgtggccgcatga
DBGET
integrated database retrieval system
