Brevundimonas sp. SGAir0440: E7T10_00020
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Entry
E7T10_00020 CDS
T06410
Symbol
gyrB
Name
(GenBank) DNA topoisomerase (ATP-hydrolyzing) subunit B
KO
K02470
DNA gyrase subunit B [EC:
5.6.2.2
]
Organism
brev
Brevundimonas sp. SGAir0440
Brite
KEGG Orthology (KO) [BR:
brev00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
brev03032
]
E7T10_00020 (gyrB)
03400 DNA repair and recombination proteins [BR:
brev03400
]
E7T10_00020 (gyrB)
Enzymes [BR:
brev01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.2 DNA topoisomerase (ATP-hydrolysing)
E7T10_00020 (gyrB)
DNA replication proteins [BR:
brev03032
]
Prokaryotic type
DNA Topoisomerases
E7T10_00020 (gyrB)
DNA repair and recombination proteins [BR:
brev03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Facilitator
E7T10_00020 (gyrB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_gyraseB
DNA_gyraseB_C
Toprim
HATPase_c
GyrB_hook
GyrB_insert
Phage_cap_P2
HATPase_c_3
Motif
Other DBs
NCBI-ProteinID:
QCQ97164
UniProt:
A0A4P8Q5F6
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Position
4033..6459
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AA seq
808 aa
AA seq
DB search
MTDPIADLPEYGADSIKVLKGLDAVRKRPGMYIGDTDDGSGLHHMVYEVVDNAIDEALAG
HADLVQVILNSDGSVTVTDNGRGIPTDIHAEEGVSAAEVIMTQLHAGGKFDQNSYKVSGG
LHGVGVSVVNALSDWLQLKIYRDGKQHEMRFERGDTVKSLEVTGVAPMREDTGKPLSGTE
VTFFPSVTTFSHIDFDLKTLEHRLRELAFLNSGVVIKLADQRHAEPVEMILHYQGGVEAF
VRHLDKSKTPILKDVIVIRGKKEGIELDLALWWNDSYHETMLCFTNNIPQRDGGTHLSAF
RASLTRVMGGYIESSGAGKKEKVSVTGEDAREGLTCVLSVKVPDPKFSSQTKDKLVSSEV
RPAVESLCSEGLSTWFEEHPVEAKQIVAKIIEAASAREAARKARDLTRRKSALEISSLPG
KLADCQERDPAKSELFIVEGDSAGGSAKQARNRENQAVLPLRGKILNVERARFDRMLSSD
LIGTLILALGTGIGRDDFNADKLRYHKIILMADADVDGAHIRTLLLTFFYRQMPELITRG
HVYIAQPPLYKVSKGKQSRYLKDQAEMDAYLIEEGSSEAELDLSTGERRLGLDLQSLVRE
AKAFSAGVDRLSQRAPAFAIEQAALAGLFADNADMTAASAAAAVRLNLYAEEGDGEWTGA
PGEQGAVVFSRTRRAVQETIVLEETLIRSLDARRLAERAGAFDGVFSAPATYRRKDKSTT
IRGPLDLLTAVLDAGKKGLSIQRYKGLGEMNPEQLWETTLDVNARTLLQVSVEHEEDAND
LFAKLMGDVVEPRREFIQDNALDAAVDV
NT seq
2427 nt
NT seq
+upstream
nt +downstream
nt
atgaccgatccgattgccgacctgcccgaatacggcgccgattccatcaaggttctcaaa
ggcctggacgccgtgcgcaagcgccccggcatgtatatcggcgacaccgatgacggctcg
ggcctgcaccacatggtctatgaggtggtcgacaatgcgatcgatgaggccctggccggt
cacgccgacctggtccaggtcatcctgaacagcgacggctcggtcaccgtgaccgacaac
ggacgcggcattcccaccgacatccacgccgaggaaggcgtatccgccgccgaggtcatc
atgacccagctgcacgcgggcggtaagttcgaccagaactcctacaaggtgtccggcggt
ctgcacggcgtgggcgtgtcggtggtcaacgccctgtccgactggctgcagctcaagatc
tatcgcgacggcaagcagcacgagatgcgcttcgagcgcggcgacacggtcaagtcgctg
gaagtcacgggcgtcgccccgatgcgcgaagacaccggcaaaccgctgagcgggaccgag
gtcaccttcttcccgtccgtcacgaccttcagccacatcgacttcgatctgaagacgctg
gaacaccgtctgcgcgaactggccttcctgaactcgggcgtggtgatcaagctggccgac
cagcgccacgccgagccggtcgagatgatcctgcactaccagggcggggtcgaggccttc
gtgcggcacctcgacaagtcgaagacgccgatcctgaaggacgtcatcgtcattcgcggc
aagaaggaagggatcgaactggatctcgccctgtggtggaacgacagctaccacgagacc
atgctgtgcttcaccaacaacatcccccagcgggatggaggcacccacctgtcggccttc
cgcgccagcctgacccgcgtcatgggcggctatatcgagagctcgggcgccggaaagaag
gagaaggtctccgtcaccggcgaggacgcccgcgagggcctaacctgcgtcctgtcggtc
aaggtgccggatcccaagttcagctcccagaccaaggacaagctggtctcctccgaagtg
cgtccggccgtcgaaagcctgtgctcggaaggcttgtcgacatggttcgaggagcatccg
gtcgaggccaagcagatcgtggccaagatcatcgaggcggcgtcggcccgtgaggccgcc
cgcaaggcccgcgacctgacccgccgcaaatccgcgctggaaatctcgagcctgccgggc
aagctggccgactgccaggagcgcgatcccgccaagtccgaactgttcatcgtcgagggc
gattccgccggcggctcggccaaacaggcgcgcaaccgcgagaaccaggccgtcctgccc
ctgcgcggcaagatcctgaacgtcgaacgcgcgcgctttgaccggatgctgtcgtcggac
ctgatcggcacgctgatcctggcgctcggcaccggcatcggccgcgacgacttcaacgcc
gacaagctgcgctaccacaagatcatcctgatggcggacgccgacgtcgacggcgcccac
atccgcaccctgctgctgaccttcttctatcgccagatgcccgagctgatcacgcgcggc
cacgtctatatcgcccagccgcccctctataaggtctccaagggcaagcagtcgcgctac
ctgaaggatcaggccgagatggacgcctatctgatcgaggaaggttcgtcagaggccgag
ctggacctgtccacgggcgagcgtcgcctgggtctggacctgcaatcgctggtgcgcgag
gccaaggccttcagcgccggcgtcgatcgcctcagccagcgcgcgcccgccttcgccatc
gaacaggcggcgctcgccggcctgttcgccgacaacgccgatatgacggccgcctcggcc
gccgccgccgttcgcctgaacctgtatgccgaagagggcgatggcgaatggacgggcgcg
ccgggcgaacagggcgccgtggtcttcagccgcacccgtcgcgcggtgcaggaaacgatc
gtgctggaggaaaccctgatccgttcgctggacgcccgtcgcctggccgaacgcgccggc
gccttcgacggcgttttcagcgccccggccacctaccgccgcaaggacaagtccacgacc
attcgcggtccgctggatctgctgaccgccgtgctggacgccggcaagaagggtctgtcg
atccagcgctacaagggcctgggcgagatgaaccccgagcagctttgggagacgacgctg
gacgtcaacgcccgcaccctgctccaggtctcggtcgagcacgaggaagacgccaacgac
ctgttcgccaagctgatgggcgacgtggtcgaaccgcgccgcgagttcatccaggacaac
gccctggacgccgccgtcgacgtctga
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