Brevundimonas sp. GW460-12-10-14-LB2: A4249_01670
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Entry
A4249_01670 CDS
T04395
Name
(GenBank) excinuclease ABC subunit C
KO
K03703
excinuclease ABC subunit C
Organism
brg
Brevundimonas sp. GW460-12-10-14-LB2
Pathway
brg03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
brg00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
A4249_01670
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
brg03400
]
A4249_01670
DNA repair and recombination proteins [BR:
brg03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
A4249_01670
BRITE hierarchy
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Gene cluster
GFIT
Motif
Pfam:
UvrC_RNaseH_dom
UVR
GIY-YIG
HHH_5
HHH_2
Motif
Other DBs
NCBI-ProteinID:
ANC52503
UniProt:
A0A168N5H4
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Position
complement(317448..319328)
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AA seq
626 aa
AA seq
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MTEETPDSQLKAAALIADEARRAPDKPGVYRMYGEDGSCLYVGKAKSLKKRIIQYAQGRF
HTQRIGLMVSQTRSMELVVTATETEALLLESNFIKKLKPRFNVVLRDDKSFAELMIRRDH
RAPQVRKHRGAHTTPGDYFGPFASTWAVNRTLNTLQKAFLLRSCSDSVYETRTRPCMLHQ
IKRCSAPCTGLISLEDYGELVTEAEQFLRGKSRAVIGRLSKEMQAASDEMDFEQAARVRD
RIRALSAIAMENSVSADSVAEGDVFALHSDGGQACVQVFFYRAGQNWGGRAYFPRVDKTD
TDPEILAAFLGQFYEDKPIPRLILSNVRPHELELLEEAFSMKADRKVEIVRPMRGEKLAL
VDHALTNAREALGRRLAESSAQGKILDEVCEAFGLESRPERIEIYDNAHIQGTNAVGGMV
VAGPEGFQKSQYRKFNIRGEDLTPGDDYGMMREVMRRRFSRLIKDEEEGEAKGEDVVRPD
LLLIDGGAGQLAEVLAVMADLGGLDDITVVGVAKGPDRDAGLEKFFMPGKAPFMLPLKSP
ALYYLQRLRDEAHRFANGAHAKRRSMDIKKNPLDEIEGVGPGRKKALLHAFGSAKGVSRA
SLADLVKVDGINQPLAERIHAFFRKS
NT seq
1881 nt
NT seq
+upstream
nt +downstream
nt
atgaccgaggagacgcctgattcccaactgaaagccgccgccctgatcgccgacgaggcg
cgccgggcgccggacaagccgggcgtctatcgcatgtatggcgaggacgggtcgtgcctt
tacgtcggcaaggccaagtcgctgaagaagcgcatcatccagtatgcgcaggggcgtttt
cacacccagcggatcggcctgatggtgtcgcagacccggtcgatggagctggtggtcacc
gccaccgagaccgaagccctgctgctggaatccaacttcatcaagaagctgaagccccgc
ttcaacgtggtgctgcgcgacgacaagtccttcgccgaattgatgatccgccgcgaccac
cgcgcgccccaggtcaggaagcatcgcggggcccacaccacgcccggcgactatttcggc
cccttcgcctcgacctgggcggtcaaccgtacgctgaacaccctgcagaaggccttcctg
ctgcggtcctgttccgacagcgtctatgagacccgcacccgcccctgcatgctgcaccag
atcaagcgttgctcggccccctgcaccggcctgatcagcctcgaggactacggcgaactg
gtcaccgaggccgaacagttcctgcgcggcaagtcccgcgccgtcatcggccgcctgtcc
aaggagatgcaggcggcgtcggacgagatggacttcgaacaggccgcccgcgtgcgcgac
cgcatccgcgccctgtcggccattgcgatggagaactccgtcagcgccgacagcgtcgcc
gaaggcgacgtcttcgccctgcattccgacggcggccaggcctgcgtccaggtcttcttc
tatcgcgccggccagaactggggcggccgcgcctatttcccgcgcgtggacaagaccgac
accgatcccgagatcctggccgccttcctgggccagttctacgaggacaaaccgatcccg
cgcctgatcttgtccaacgtgcgcccgcacgagctggaactgctggaagaggccttctcg
atgaaggcggatcgcaaggtcgagatcgtccgaccgatgcgcggcgagaagctggccctt
gtcgaccacgccctgaccaatgcgcgcgaggccctgggccggcgcctggccgaaagctcg
gcgcagggcaagattctggacgaggtgtgcgaggccttcggactggagagccgacctgaa
cggatcgagatctacgataacgcccacattcaagggaccaatgcggtgggcggcatggtc
gtcgccggccccgagggcttccagaagtcgcagtatcgcaagttcaacatccggggcgag
gatctgacgcccggcgacgactacggcatgatgcgcgaggtgatgcgccgtcgcttctca
cgcctgatcaaggacgaggaggaaggcgaggccaagggcgaagacgtggtgcgccctgac
ctgctgctgatcgacggcggcgcgggacagttggccgaggtgctggcggtcatggccgac
ttgggcgggctggacgacatcaccgtcgtcggcgtggctaaggggccggatcgcgacgcg
gggctggagaagttcttcatgcccggcaaggcccccttcatgctgccgctgaagtcgccg
gccctctactacctccaacggctgcgcgacgaagcccaccgcttcgccaacggcgcccac
gccaagcgccgctcgatggacatcaagaagaacccgctggacgagatcgaaggcgtcggc
cccggccgcaagaaggctctgctgcacgccttcggctcggccaagggcgtcagccgcgcc
tccctggccgacctggtcaaggtcgacggcatcaaccaacccctcgccgagcgcatccac
gccttcttccgtaaaagctga
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