Brevundimonas sp. GW460-12-10-14-LB2: A4249_08085
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Entry
A4249_08085 CDS
T04395
Name
(GenBank) DNA-directed RNA polymerase subunit beta'
KO
K03046
DNA-directed RNA polymerase subunit beta' [EC:
2.7.7.6
]
Organism
brg
Brevundimonas sp. GW460-12-10-14-LB2
Pathway
brg03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
brg00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
A4249_08085
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
brg03021
]
A4249_08085
03400 DNA repair and recombination proteins [BR:
brg03400
]
A4249_08085
Enzymes [BR:
brg01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
A4249_08085
Transcription machinery [BR:
brg03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Core subunits
A4249_08085
DNA repair and recombination proteins [BR:
brg03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase complex (RNAP)
A4249_08085
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_Rpb1_1
RNA_pol_Rpb1_5
RNA_pol_Rpb1_2
RNA_pol_Rpb1_3
RNA_pol_Rpb1_4
RPOC_hybrid
Motif
Other DBs
NCBI-ProteinID:
ANC53623
UniProt:
A0A160HYS8
LinkDB
All DBs
Position
complement(1617630..1621826)
Genome browser
AA seq
1398 aa
AA seq
DB search
MNQEVLNIFNPVPVTPTFDQIKIALASPEKIRSWSFGEIKKPETINYRTFKPERDGLFCA
RIFGPTKDYECLCGKYKRMKYKGIICEKCGVEVTLARVRRERMGHIDLAAPVAHIWFLKS
LPSRISLMLDMALKDVERVLYFENYIVTEPGLTPLKQNQLLTEDEFYRYQEEFGDDGFTA
EIGAEAVRNLLMGIDLNAEAEKHRAELADNPSEMKAKKASKRLKLIEAFLESGNKPEWMI
LTIVPVIPPELRPLVPLDGGRFATSDLNDLYRRVINRNNRLKRLMELRAPDIIIRNEKRM
LQESVDALFDNGRRGRVITGANKRPLKSLADMLKGKQGRFRQNLLGKRVDYSGRSVITVG
PELKLHECGLPKKMALELFKPFIYARLDAKGLSGTVKQSKRMVEREQPAVWDILDEVIRE
HPVLLNRAPTLHRLGIQAFEPKLIEGKAIRLHPLVCTAFNADFDGDQMAVHVPLSLEAQL
EARVLMMSTNNILSPANGKPIIVPSQDIVLGLYYLSLVKDGEPGEGKLFANIGEIDAALD
AKVVTLHTRIKARWTEQDAEGNEVTKVIDTTPGRMKLAALLPRNPNVGYRLLEKNLTKKE
IGNLIDVVYRHCGQKATVIFADQMMGLGFREAAKAGISFGKDDIVIPAKKVELVAETRTQ
VEEYEQQYADGLITRGEKYNKVVDAWSKATDRIADAMMGEIAQPRVLIEGENPDINSVFM
MANSGARGSQAQMKQLGGMRGLMAKPSGEIIETPITSNFKEGLTVLEYFNSTHGARKGLA
DTALKTANSGYLTRRLVDVAQDSIVTEQDCGSTRGITLRAVMEGGDVLVSLGQRILGRYA
AEDIKEPGTDTVLFPADTYLVEEVAEAVEAAGVQSVKVRSALTCEAEAGICAHCYGRDLA
RGTNVNIGEAVGVIAAQSIGEPGTQLTMRTFHIGGTAQVAETSFMEATNAGTAKVTGPTV
VAAHGDLVAMSRNVIVTVVVDGKDRETHKAPYGARIRVKDGDEVKKNQRLAEWDPYTTPI
LTEVGGVVRFEDLVEGLSVKEETDEATGIAQRVVSDWRASPRGSDLRPAMGVTLGDAYAK
LSSGSDARYLLPVGAVLSVSNGDEVKPGEIIARVPTEGAKTRDITGGLPRVAELFEARRP
KDCAVIAEMDGRVEFGRDYKNKRRIKITPEPNADGVQGEPVEFLIPKGKHISVHDGDLIQ
KGDYIIDGNPDPHDLLRIQGVEALAEYLVNEVQEVYRLQGVPINDKHIEVIVRQMLQKVE
VLDSGETTLIRGDTVEVAEAVLENAKVEKRGGRLATTQPVLLGITKASLQTRSFISAASF
QETTRVLTDASVHGKKDMLEGLKENVIVGRLIPAGTGAYLRSLQKIANERDAELTSALEE
AIEPLPADLQLELESSES
NT seq
4197 nt
NT seq
+upstream
nt +downstream
nt
atgaaccaggaagtcctgaacatcttcaacccggtcccggtcaccccgaccttcgaccag
atcaagatcgccctggcctcgcccgagaagatccgttcgtggtcgttcggcgagatcaag
aagccggaaaccatcaactaccgtacgttcaagcccgagcgtgacggcctgttctgcgcg
cgtatctttggcccgaccaaggactacgaatgcctgtgcggcaagtacaagcgcatgaag
tacaagggcatcatctgcgagaagtgcggcgtcgaagtcaccctggctcgcgttcgccgc
gagcgcatgggtcacatcgacctggctgcgccggtcgcccacatctggttcctgaagtcg
ctgcccagccgcatctcgctgatgctggacatggcgctgaaggacgtcgagcgcgtcctg
tacttcgagaactacatcgtcaccgagccgggcctgaccccgctgaagcagaaccaactg
ctgacggaagacgagttctatcgctaccaggaagagttcggcgatgacggcttcaccgcc
gagatcggcgccgaggccgtccgcaacctgctgatgggcatcgacctgaacgcggaagct
gaaaagcaccgcgccgagctggccgacaatccgtcggaaatgaaggccaagaaggcgtcc
aagcgcctgaagctgatcgaggccttcctggaatcgggcaacaagcccgagtggatgatc
ctgacgatcgtgccggtcatcccgccggaactgcgtccgctggtgccgctggacggcggt
cgtttcgcgacctccgacctgaacgacctgtatcgccgtgtcatcaaccgcaacaaccgc
ctgaagcgcctgatggagctgcgcgcgccggacatcatcatccgtaacgaaaagcggatg
ctgcaggagtctgtcgacgccctgttcgacaacggccgtcgtggtcgcgtgatcacgggc
gcaaacaagcgtccgctgaagtcgctggccgacatgctgaagggtaagcagggtcgcttc
cgtcagaacctgctgggcaagcgcgtcgactattcgggccgttcggtcatcaccgtgggt
ccggaactgaagctgcacgagtgcggcctgcccaagaagatggcgctggagctgttcaag
ccgttcatctatgcgcgcctggacgccaagggcctgtcgggcaccgtcaagcaatccaag
cgcatggtcgagcgcgagcagcccgccgtctgggacatcctggacgaggtcatccgcgag
cacccggttctgctgaaccgcgcgccgacgcttcaccgtctgggcatccaggcgttcgag
cccaagctgatcgagggcaaggccatccgcctgcacccgctggtctgcaccgccttcaac
gccgacttcgacggcgaccagatggccgttcacgtcccgctgagcctcgaggcccagctg
gaagcgcgcgtcctgatgatgtcgaccaacaacatcctgtcgcccgccaacggcaagccg
atcatcgtgccgtcgcaggacatcgtcttggggctgtactatctgtcgctggtcaaggac
ggcgagccgggtgaaggcaagctgttcgccaacatcggcgagatcgatgcggcgctggac
gccaaggtcgtcaccctgcacacgcgcatcaaggcgcgctggacggaacaggacgccgaa
ggcaatgaggtgaccaaggtcatcgacacgacgccgggtcgcatgaagctggcggctctg
ctgccgcgcaacccgaacgtcggctatcgcctgctcgagaagaacctgaccaagaaggaa
atcggcaatctgatcgacgtggtctatcgccactgcggtcagaaggcgacggtcatcttc
gccgaccagatgatgggcctgggcttccgcgaagccgccaaggccggcatttcgttcggc
aaggacgacatcgtgatcccggccaagaaggtcgagctggtcgccgaaacgcgcacccag
gtcgaggagtacgagcaacagtacgccgacggcctgatcacgcgcggcgagaagtacaac
aaggtggtggacgcctggtccaaggccacggaccggatcgccgacgccatgatgggcgag
atcgcgcaaccgcgcgtgctgatcgagggtgaaaaccccgacatcaactcggtcttcatg
atggccaactccggcgcccgtggttcgcaggcccagatgaagcaactgggcggcatgcgc
ggcctgatggccaagccgtccggcgagatcatcgagacgccgatcacctcgaacttcaag
gaaggcctgaccgtccttgaatacttcaactccacccacggcgcccgtaagggtctggcc
gacaccgcgctgaagaccgccaactcgggttacctgacccgccgtctggtggacgtggcg
caggactccatcgtcaccgagcaggattgcggctcgacgcgcggcatcaccctgcgtgcg
gtgatggaaggcggcgacgtgctggtctcgctgggtcagcgcatcctgggtcgctatgcg
gccgaggacatcaaggagccgggcaccgataccgtcctgttccccgccgacacctatctg
gtggaagaagtcgccgaggccgtcgaggccgcgggcgtccagtcggtcaaggtccgttcg
gccctgacctgcgaggcagaagccggcatctgcgcccactgctacggccgtgacctggcg
cgcggcaccaacgtcaacatcggcgaagcggtcggcgtcatcgccgcccagtcgatcggc
gagccgggcacccagctgacgatgcggaccttccacatcggcggtacggcccaggtggcg
gaaacctccttcatggaggcgaccaacgccggtacggccaaggtcaccggcccgaccgtc
gtcgcggcccacggcgacctagtggccatgagccgcaacgtcatcgtgaccgtggtcgtc
gacggcaaggaccgcgagacgcacaaggctccttacggcgcccgcatccgcgtcaaggac
ggtgacgaggtcaagaagaaccaacgcctggcggagtgggacccctataccaccccgatc
ctgacggaagtcggcggcgtcgtgcgcttcgaggacctggtcgaaggcctgtcggtcaag
gaagaaaccgacgaagcgacgggcatcgcccagcgcgtcgtcagcgactggcgcgccagc
ccgcgcggttcggacctgcgtccggccatgggcgtcaccctgggcgacgcctacgccaag
ctgtcgtccggttcggacgcccgctatctgctgcccgtgggcgctgttctgtccgtgtcg
aacggcgacgaggtcaagccgggcgagatcatcgctcgcgttccgaccgaaggcgccaag
acccgcgacatcaccggcggtctgccgcgcgtcgccgaactgttcgaagctcgccgtccg
aaggactgcgcggtcatcgccgagatggatggccgcgtcgaattcggccgcgactacaag
aacaagcgtcgcatcaagatcacgcccgagcccaacgccgacggcgtgcagggcgaaccg
gtcgagttcctgatcccgaagggcaagcacatctccgtccacgacggcgatctgatccag
aagggcgactacatcatcgacggcaacccggatccgcacgatctgctgcgcatccaaggc
gtcgaggcgctggccgagtatctggtgaacgaagtgcaggaggtctatcgactgcagggc
gtgccgatcaacgacaagcacatcgaagtcatcgtgcgtcagatgctgcagaaggtggaa
gtgctggattcgggtgaaaccaccctgatccgcggcgacaccgtcgaagtcgcagaagcc
gttctggagaacgccaaggtcgagaagcgtggcggccgtctggccaccacccagcccgtc
ctgctgggcatcaccaaggcgtcgctgcaaacccgcagcttcatctcggcggcgtccttc
caggagaccacccgcgtcctcaccgacgcctcggtccacggcaagaaggacatgctggaa
ggcctgaaggaaaacgtcatcgtcggccgcctgatcccggccggcaccggcgcctacctg
cgcagcctgcagaagatcgccaacgagcgtgatgcagaactgacctcggctctggaagag
gcgatcgagcctctgccggccgatctgcaactggagctggagagcagcgagagctga
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