Brucella sp. 09RB8471: BKD03_06865
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Entry
BKD03_06865 CDS
T06323
Name
(GenBank) MBL fold metallo-hydrolase
KO
K12574
ribonuclease J [EC:3.1.-.-]
Organism
brj
Brucella sp. 09RB8471
Pathway
brj03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
brj00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
BKD03_06865
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
brj03019
]
BKD03_06865
Messenger RNA biogenesis [BR:
brj03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Ribonucreases
BKD03_06865
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GFIT
Motif
Pfam:
RNase_J_C
Lactamase_B_2
Lactamase_B
RMMBL
Regulator_TrmB
Motif
Other DBs
NCBI-ProteinID:
APX69164
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Position
2:complement(181089..182765)
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AA seq
558 aa
AA seq
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MARSNTTEFVFLPLGGVGEIGMNLAMYGFGPADNREWLVVDMGVSFAGPEQPGADLILPD
IRYLEAEKHNLRGIVITHAHEDHFGALLDLWPRLKVPVYATPFTAGLLEAKRQSEDSAPE
IPITIYKAGETFEVGPFKIEAVAVTHSIPEPVSLAITTPLGTVVHTGDWKMDPEPSLGPV
IDEARFRAIGEAGVLALICDSTNALREGESPSERQVGESLRELIQNARGRVAITTFSSNV
GRIRSITEAARDAGRQVLVVGRSMKRAISVATELGYMEGLPEYLSEEDYGYIPRENVVMI
LTGSQGEPRAALAKLARDEMRSLALMAGDTVIYSSRSIPGNEKAILDIKNRLIDRGIKII
GDEDALVHVSGHPRRSELRRMYSWVRPQILVPVHGEAAHLVAQGSLGAMEGIEQIAQVRD
GDMLRLAPGKAEIIDEAPVGRLYKDGKLIGDEEEIGMVERRKLAYVGHVAVSVLLDREHK
MLDEPDLVAFGLPEEDRQGELMEDILLDAAIEAIDSIPRVRRKDIETVRESVRRAVRAAA
NEAWGKKPVVTVFVNRIR
NT seq
1677 nt
NT seq
+upstream
nt +downstream
nt
atggcccggtccaatactacggaattcgtctttctgccgctcggcggtgtaggcgaaatc
ggcatgaatttggccatgtatggttttggtcctgcggataaccgcgaatggctggtcgtg
gatatgggggtcagctttgccgggccggaacagccgggcgccgacctcatcctgccggat
attcgctatctcgaagctgaaaagcataatctgcgcggcattgtcatcacccatgcgcat
gaagatcattttggcgcgctgcttgatctttggccgcgcctgaaagttcccgtctatgcg
acgccgttcacggctggtctgctggaagccaagcgccagtcggaagacagtgcgccggaa
attccaatcacgatctataaggccggcgagacgtttgaagtcggcccgttcaagattgaa
gccgtcgctgtcacccattcgatcccggagccggtttcgctggccatcaccacgccgctt
ggcacggtggtgcatacgggcgactggaaaatggacccggagccatcgcttggccccgtc
attgacgaagcgcgctttcgcgccataggtgaggccggtgttctggcgctgatctgcgac
tctaccaatgcgctgcgtgaaggtgagtccccgtcggagcgccaggtgggtgaaagtctg
cgtgaactgatccagaatgcgcgcggacgtgtggcgatcacaaccttttcctccaatgtg
gggcgtatccgttcgatcacggaagctgcccgcgatgcgggccggcaggttctggtggtg
gggcgttcgatgaagcgcgctatctcggttgcaaccgaacttggttatatggaaggcctg
ccggaatatctcagcgaagaggattacggctatattccgcgtgaaaatgtggtgatgatc
ctgaccggcagtcagggcgagccgcgcgcggcactggcgaaacttgcccgcgatgagatg
cgcagcctcgccctgatggcgggtgatacggtcatctattcgtcgcggtccattcccggc
aacgaaaaggccattctcgacatcaagaaccggctgatcgatcgcggcatcaagatcatt
ggcgatgaggacgccctcgttcacgtttcaggccatccgcgccgcagtgagttgcgccgc
atgtattcctgggttcgtccgcagattctcgtgccggtgcatggcgaggccgctcatctg
gttgcgcaagggtctctgggcgcgatggagggtatcgagcagatcgcacaggtgcgtgac
ggcgacatgctgcgccttgcgcccggcaaggccgagatcattgacgaagcgccagtgggc
cgcctctacaaggacggcaagctgatcggcgacgaagaagaaatcggtatggtggagcgg
cgcaagctcgcctatgtcggccatgttgcggtatcggttctgctcgaccgcgagcacaag
atgctggacgagcccgaccttgtggccttcggcctgcctgaggaggacaggcagggtgaa
ctgatggaagacattctgctggatgcagccatcgaggcgatcgacagcataccgcgcgtt
cgccgcaaggatattgagacggtgcgcgagtctgttcgccgcgccgtccgggctgcggca
aatgaagcctggggcaaaaagccggtagtgaccgtcttcgtgaataggatacggtaa
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