KEGG   Brucella sp. 09RB8471: BKD03_06865
Entry
BKD03_06865       CDS       T06323                                 
Name
(GenBank) MBL fold metallo-hydrolase
  KO
K12574  ribonuclease J [EC:3.1.-.-]
Organism
brj  Brucella sp. 09RB8471
Pathway
brj03018  RNA degradation
Brite
KEGG Orthology (KO) [BR:brj00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   03018 RNA degradation
    BKD03_06865
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:brj03019]
    BKD03_06865
Messenger RNA biogenesis [BR:brj03019]
 Prokaryotic type
  Bacterial mRNA degradation factors
   RNA degradosome components
    Ribonucreases
     BKD03_06865
SSDB
Motif
Pfam: RNase_J_C Lactamase_B_2 Lactamase_B RMMBL Regulator_TrmB
Other DBs
NCBI-ProteinID: APX69164
LinkDB
Position
2:complement(181089..182765)
AA seq 558 aa
MARSNTTEFVFLPLGGVGEIGMNLAMYGFGPADNREWLVVDMGVSFAGPEQPGADLILPD
IRYLEAEKHNLRGIVITHAHEDHFGALLDLWPRLKVPVYATPFTAGLLEAKRQSEDSAPE
IPITIYKAGETFEVGPFKIEAVAVTHSIPEPVSLAITTPLGTVVHTGDWKMDPEPSLGPV
IDEARFRAIGEAGVLALICDSTNALREGESPSERQVGESLRELIQNARGRVAITTFSSNV
GRIRSITEAARDAGRQVLVVGRSMKRAISVATELGYMEGLPEYLSEEDYGYIPRENVVMI
LTGSQGEPRAALAKLARDEMRSLALMAGDTVIYSSRSIPGNEKAILDIKNRLIDRGIKII
GDEDALVHVSGHPRRSELRRMYSWVRPQILVPVHGEAAHLVAQGSLGAMEGIEQIAQVRD
GDMLRLAPGKAEIIDEAPVGRLYKDGKLIGDEEEIGMVERRKLAYVGHVAVSVLLDREHK
MLDEPDLVAFGLPEEDRQGELMEDILLDAAIEAIDSIPRVRRKDIETVRESVRRAVRAAA
NEAWGKKPVVTVFVNRIR
NT seq 1677 nt   +upstreamnt  +downstreamnt
atggcccggtccaatactacggaattcgtctttctgccgctcggcggtgtaggcgaaatc
ggcatgaatttggccatgtatggttttggtcctgcggataaccgcgaatggctggtcgtg
gatatgggggtcagctttgccgggccggaacagccgggcgccgacctcatcctgccggat
attcgctatctcgaagctgaaaagcataatctgcgcggcattgtcatcacccatgcgcat
gaagatcattttggcgcgctgcttgatctttggccgcgcctgaaagttcccgtctatgcg
acgccgttcacggctggtctgctggaagccaagcgccagtcggaagacagtgcgccggaa
attccaatcacgatctataaggccggcgagacgtttgaagtcggcccgttcaagattgaa
gccgtcgctgtcacccattcgatcccggagccggtttcgctggccatcaccacgccgctt
ggcacggtggtgcatacgggcgactggaaaatggacccggagccatcgcttggccccgtc
attgacgaagcgcgctttcgcgccataggtgaggccggtgttctggcgctgatctgcgac
tctaccaatgcgctgcgtgaaggtgagtccccgtcggagcgccaggtgggtgaaagtctg
cgtgaactgatccagaatgcgcgcggacgtgtggcgatcacaaccttttcctccaatgtg
gggcgtatccgttcgatcacggaagctgcccgcgatgcgggccggcaggttctggtggtg
gggcgttcgatgaagcgcgctatctcggttgcaaccgaacttggttatatggaaggcctg
ccggaatatctcagcgaagaggattacggctatattccgcgtgaaaatgtggtgatgatc
ctgaccggcagtcagggcgagccgcgcgcggcactggcgaaacttgcccgcgatgagatg
cgcagcctcgccctgatggcgggtgatacggtcatctattcgtcgcggtccattcccggc
aacgaaaaggccattctcgacatcaagaaccggctgatcgatcgcggcatcaagatcatt
ggcgatgaggacgccctcgttcacgtttcaggccatccgcgccgcagtgagttgcgccgc
atgtattcctgggttcgtccgcagattctcgtgccggtgcatggcgaggccgctcatctg
gttgcgcaagggtctctgggcgcgatggagggtatcgagcagatcgcacaggtgcgtgac
ggcgacatgctgcgccttgcgcccggcaaggccgagatcattgacgaagcgccagtgggc
cgcctctacaaggacggcaagctgatcggcgacgaagaagaaatcggtatggtggagcgg
cgcaagctcgcctatgtcggccatgttgcggtatcggttctgctcgaccgcgagcacaag
atgctggacgagcccgaccttgtggccttcggcctgcctgaggaggacaggcagggtgaa
ctgatggaagacattctgctggatgcagccatcgaggcgatcgacagcataccgcgcgtt
cgccgcaaggatattgagacggtgcgcgagtctgttcgccgcgccgtccgggctgcggca
aatgaagcctggggcaaaaagccggtagtgaccgtcttcgtgaataggatacggtaa

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