Brachyspira murdochii: Bmur_0235
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Entry
Bmur_0235 CDS
T01229
Name
(GenBank) RNA polymerase, sigma 54 subunit, RpoN
KO
K03092
RNA polymerase sigma-54 factor
Organism
brm
Brachyspira murdochii
Pathway
brm02020
Two-component system
brm02040
Flagellar assembly
Brite
KEGG Orthology (KO) [BR:
brm00001
]
09130 Environmental Information Processing
09132 Signal transduction
02020 Two-component system
Bmur_0235
09140 Cellular Processes
09142 Cell motility
02040 Flagellar assembly
Bmur_0235
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
brm03021
]
Bmur_0235
Transcription machinery [BR:
brm03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
Bmur_0235
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma54_CBD
Sigma54_DBD
Sigma54_AID
HTH_3
LacI
HTH_21
HTH_36
Motif
Other DBs
NCBI-ProteinID:
ADG70341
UniProt:
D5U574
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All DBs
Position
318414..319724
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AA seq
436 aa
AA seq
DB search
MVNNTSLSANTSIRTAIKNDLRLNYQTRLWLDTISSSAVELKEKIEKAMEDNPFLEYDIK
DKYTSKSSSSDIDSIIENTAANGKESLFSHLKSQIEISFKSKKEMELAEQICSFINHDGY
LKITSGEMSNILNASVSEIEKIVSVIKTFDPYGVAAKDINECLSIQLKMKKKEDLKENGF
LYDTAIDIVENYLDKLSKKDYDYIASSIGVEKDTVIKALKLIQTLEPYPAREYDTSAVKY
IVPELFILKENGIWIVKTDETFIPPLKISKKYIKLLDREKSKDSINFLKEKKKEAESLIN
AANERKKSLLKIGEALLKFQLDFFEYGKEFIKPLTLKDMSLEVNLSESTVSRIANGKYLN
TVWGTFSIKYFFSRAINGGLGSRGVKEIIKRIIENSQAKLSDEKIRLILKSEGIDISRRT
IAKYRKSMNIFSSRNR
NT seq
1311 nt
NT seq
+upstream
nt +downstream
nt
atggttaacaatacatctttatcagcaaatacatctataagaacagctatcaaaaatgat
ttaaggcttaactatcaaactagactatggcttgatactatatcttcaagtgctgtagaa
ttaaaagaaaagatagaaaaagcaatggaagataatccgtttttggagtatgatataaaa
gataaatacacttcaaaatcatcatcatcagatattgactccataatagaaaatactgcc
gcaaacggaaaagaaagtttattctcgcatttgaaaagtcagatagaaataagttttaaa
agtaaaaaagaaatggagcttgcagagcaaatatgcagttttataaatcatgacggatat
ctaaaaattacaagcggagagatgtctaatatacttaatgcttcagtttcagaaatagaa
aaaatagtatctgtaataaaaacttttgatccatacggagtagctgccaaagatattaat
gaatgtctttctatacaattaaaaatgaaaaaaaaggaagatttaaaagaaaacggattt
ctatatgatacagctattgacatagtagaaaattatttagataaactctctaaaaaagac
tatgattatatagcctcaagtataggtgtagaaaaagatacagttataaaagcattaaaa
ctcatacaaacattagaaccctaccccgcaagggaatacgatacttctgctgtaaaatat
atagttccagaactttttatactaaaagaaaatggaatttggattgtaaaaacagatgaa
acttttataccccccttgaaaattagcaaaaaatatattaaactattagatagagagaaa
agtaaagatagtataaactttttgaaagaaaaaaagaaagaagcggaaagcctcataaat
gcagcaaatgaaagaaaaaaatctttattaaaaataggcgaagctctgcttaaatttcag
ctcgatttctttgaatacggcaaagagtttattaagccattaactttaaaagatatgtct
ttagaagttaatttaagcgaatctactgtaagcagaatagctaatggtaaatatctcaat
actgtctggggtactttttctataaaatattttttctctagggctataaatggcgggcta
ggctcaagaggtgtaaaagaaattattaaaagaattatagaaaactctcaggctaaacta
agcgatgaaaaaattagattaatacttaaaagcgaaggcattgatatatcaagaagaaca
atagccaagtaccgaaaaagtatgaatattttttcatcaagaaatagataa
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